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The map label for this gene is yrbB

Identifier: 15673644

GI number: 15673644

Start: 1711410

End: 1712009

Strand: Reverse

Name: yrbB

Synonym: L111159

Alternate gene names: 15673644

Gene position: 1712009-1711410 (Counterclockwise)

Preceding gene: 15673646

Following gene: 15673642

Centisome position: 72.37

GC content: 39.5

Gene sequence:

>600_bases
ATGAAATTAAGTAAAGTTGCTATTTCAACGGGATTAGTTGCATCATTCATGTTTATTGGGGGCGGAATCGCTCATGCGGA
TACACCTAAATCAACTCATGAAGTTGCTATAGAAGTAATTAACGGAAACTACGGAAATGGAGATACTCGTGTCACTAACC
TTCAAAGTAAAGGTTTTGATGTGAAAGCAATCCAAACAGAAGTTAATAACATTCTTACAGGAACAACAACTCAAGTTTCT
GCAACAACTAAAACTGCTGAAGAACAACCTACTAAAGTTACATCAGTTGCACCAACTCAAGCAACACAAAGTGTTTCTGG
TGGGCTTAATATGAGCCAAACTTCTGGACAAGTTGACATCCAAGCTCTTGCTAATTATATGGCATCGAATACAGCTAATG
CAGCGGGCTATTCTGCTAGCGAATGGGCTTATATCATTACTCACGAATCAAATGGTGGGATTGATAGTGTGAATTCAAGT
TCAGGTGCTTATGGTGCTTTCCAATTGCTAGGTCATGGCGAATATGCTGGAATGACTTTGGCAGAACAAATTGCGATGGC
AAGTAAACTTCCTGCTGGTAGCTGGGTTGTTTATAACTAA

Upstream 100 bases:

>100_bases
CTTTATGATGTGTATGGGAAGTAACCATGTTAATAGAAGATAGACTGGATTCAGTTTGAATCCTATGGAATGTTCTTAGT
GGCGAAATCGAAAGGTCTAA

Downstream 100 bases:

>100_bases
GCATTGATTAAAACTCGTCTTAAAATCTTTGATAAATAAATCAAACTTAGTGGCTCATAGCAATCAACTCTCAAGTTCGT
TTGGGATTGATTGAGTATAA

Product: hypothetical protein

Products: NA

Alternate protein names: Immunodominant staphylococcal antigen A [H]

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKLSKVAISTGLVASFMFIGGGIAHADTPKSTHEVAIEVINGNYGNGDTRVTNLQSKGFDVKAIQTEVNNILTGTTTQVS
ATTKTAEEQPTKVTSVAPTQATQSVSGGLNMSQTSGQVDIQALANYMASNTANAAGYSASEWAYIITHESNGGIDSVNSS
SGAYGAFQLLGHGEYAGMTLAEQIAMASKLPAGSWVVYN

Sequences:

>Translated_199_residues
MKLSKVAISTGLVASFMFIGGGIAHADTPKSTHEVAIEVINGNYGNGDTRVTNLQSKGFDVKAIQTEVNNILTGTTTQVS
ATTKTAEEQPTKVTSVAPTQATQSVSGGLNMSQTSGQVDIQALANYMASNTANAAGYSASEWAYIITHESNGGIDSVNSS
SGAYGAFQLLGHGEYAGMTLAEQIAMASKLPAGSWVVYN
>Mature_199_residues
MKLSKVAISTGLVASFMFIGGGIAHADTPKSTHEVAIEVINGNYGNGDTRVTNLQSKGFDVKAIQTEVNNILTGTTTQVS
ATTKTAEEQPTKVTSVAPTQATQSVSGGLNMSQTSGQVDIQALANYMASNTANAAGYSASEWAYIITHESNGGIDSVNSS
SGAYGAFQLLGHGEYAGMTLAEQIAMASKLPAGSWVVYN

Specific function: Is able to cleave peptidoglycan [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transglycosylase family. IsaA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010618 [H]

Pfam domain/function: PF06737 Transglycosylas [H]

EC number: NA

Molecular weight: Translated: 20561; Mature: 20561

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSKVAISTGLVASFMFIGGGIAHADTPKSTHEVAIEVINGNYGNGDTRVTNLQSKGFD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCE
VKAIQTEVNNILTGTTTQVSATTKTAEEQPTKVTSVAPTQATQSVSGGLNMSQTSGQVDI
EEEHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEEH
QALANYMASNTANAAGYSASEWAYIITHESNGGIDSVNSSSGAYGAFQLLGHGEYAGMTL
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH
AEQIAMASKLPAGSWVVYN
HHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MKLSKVAISTGLVASFMFIGGGIAHADTPKSTHEVAIEVINGNYGNGDTRVTNLQSKGFD
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEECCCCCCCCEEEEECCCCCE
VKAIQTEVNNILTGTTTQVSATTKTAEEQPTKVTSVAPTQATQSVSGGLNMSQTSGQVDI
EEEHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCEEH
QALANYMASNTANAAGYSASEWAYIITHESNGGIDSVNSSSGAYGAFQLLGHGEYAGMTL
HHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCCHHH
AEQIAMASKLPAGSWVVYN
HHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA