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The map label for this gene is yqjB

Identifier: 15673628

GI number: 15673628

Start: 1694107

End: 1694667

Strand: Reverse

Name: yqjB

Synonym: L93855

Alternate gene names: 15673628

Gene position: 1694667-1694107 (Counterclockwise)

Preceding gene: 15673629

Following gene: 15673627

Centisome position: 71.64

GC content: 34.76

Gene sequence:

>561_bases
ATGATATTAAATTTGATTATTTTAGTAGCCTTGGTTTGGGCTTTCATGGTTGGTTACTCACGAGGCTTGATTTTACAAGT
CATCTACAGTTTTGGTACGATTATTGCGGCCTTCATTGCAGCCAGTAATTATAAAGAGTTAGCACAAAAATTGAGTATTT
GGGTTCCTTTTTCAAATGCCACAGAAAACTCACATCTCTTACTTTTTAGTGATAAGCTTCTTTTTCAACTCGATGATGCT
TTTTATGCGAGCATTTCGTTTTTAGCAATTTTTATTGTCGTTTATGCTATTATCCGTCTTATCGGTTTATTTTTACATTT
TGCACTTAGTCCTCTGGGAAGAAATGGAAAAATCATTGCTGGAATTTTAGGATTTGCGGCGACTTATTTTGGTTTACAAA
TGGTCTTGATGGTCTTGAGTTTGGTTCCTATTGCAGCGGTTCAAAGTCAACTTGATGCTAGTTTTCTAGCTCGTTTTATG
GTTTTACATACACCGATTTCATCAGGAATCTTGCAAAACCTTTTTATTGAAAATATTGTCCACATTAATCCTCTAGGATA
G

Upstream 100 bases:

>100_bases
AAAGAAAAATGACTTGAACTTAGCTTCATTAATAAAAATGAGCCAAGTTTTATGAGTGCTTTGTTTAAAAAGCAAAATAA
AAGTAAATTGGGAATGTTTG

Downstream 100 bases:

>100_bases
TGCTAGGGGAGAAATCTACAGATACAACTTGAAATTTAAATAGAATGAATAAAAAAATTCTCCAAATATTGGAATATGAT
AAAGTCAAAGAACAGTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MILNLIILVALVWAFMVGYSRGLILQVIYSFGTIIAAFIAASNYKELAQKLSIWVPFSNATENSHLLLFSDKLLFQLDDA
FYASISFLAIFIVVYAIIRLIGLFLHFALSPLGRNGKIIAGILGFAATYFGLQMVLMVLSLVPIAAVQSQLDASFLARFM
VLHTPISSGILQNLFIENIVHINPLG

Sequences:

>Translated_186_residues
MILNLIILVALVWAFMVGYSRGLILQVIYSFGTIIAAFIAASNYKELAQKLSIWVPFSNATENSHLLLFSDKLLFQLDDA
FYASISFLAIFIVVYAIIRLIGLFLHFALSPLGRNGKIIAGILGFAATYFGLQMVLMVLSLVPIAAVQSQLDASFLARFM
VLHTPISSGILQNLFIENIVHINPLG
>Mature_186_residues
MILNLIILVALVWAFMVGYSRGLILQVIYSFGTIIAAFIAASNYKELAQKLSIWVPFSNATENSHLLLFSDKLLFQLDDA
FYASISFLAIFIVVYAIIRLIGLFLHFALSPLGRNGKIIAGILGFAATYFGLQMVLMVLSLVPIAAVQSQLDASFLARFM
VLHTPISSGILQNLFIENIVHINPLG

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003825 [H]

Pfam domain/function: PF02674 Colicin_V [H]

EC number: NA

Molecular weight: Translated: 20482; Mature: 20482

Theoretical pI: Translated: 8.86; Mature: 8.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILNLIILVALVWAFMVGYSRGLILQVIYSFGTIIAAFIAASNYKELAQKLSIWVPFSNA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
TENSHLLLFSDKLLFQLDDAFYASISFLAIFIVVYAIIRLIGLFLHFALSPLGRNGKIIA
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
GILGFAATYFGLQMVLMVLSLVPIAAVQSQLDASFLARFMVLHTPISSGILQNLFIENIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HINPLG
HCCCCC
>Mature Secondary Structure
MILNLIILVALVWAFMVGYSRGLILQVIYSFGTIIAAFIAASNYKELAQKLSIWVPFSNA
CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCC
TENSHLLLFSDKLLFQLDDAFYASISFLAIFIVVYAIIRLIGLFLHFALSPLGRNGKIIA
CCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
GILGFAATYFGLQMVLMVLSLVPIAAVQSQLDASFLARFMVLHTPISSGILQNLFIENIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
HINPLG
HCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]