| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is uxuT
Identifier: 15673612
GI number: 15673612
Start: 1675372
End: 1676898
Strand: Reverse
Name: uxuT
Synonym: L0023
Alternate gene names: NA
Gene position: 1676898-1675372 (Counterclockwise)
Preceding gene: 15673613
Following gene: 15673611
Centisome position: 70.89
GC content: 37.79
Gene sequence:
>1527_bases ATGGCAGAAAAACAAAAAACTTCATGGGTTTATACCCCAAAAGCAATCAATACAAGGCGTGGTCTTCTTTACGGTTTGAC TGATTTAATGGGCGGAGGCTGGAATAACATTGTTTCAGGAGTCATCTTTGTCTTTGTTCTTTCACAAGGAATTAGTCCTC TTTTTACAGGAGCAGTTTTGGGAATTGGTCGGATTATTGATGCCGTCTGGTCCCTCTTTTTTGGGGCAATTACTGACCGT TTTTATAGAACAAAATTAGGACAAAAATATGGACGACGTCATTTCTTTATTGCACTTGGCGGAATATTATTTGCGATTTT ATTTCCAATGTTTTGGATTTCAACTAGCAGTTGGCAATATTATCTTTGGGTTTATGTTGCGATTGAGGTAGCGATTTCCA TGATTTTAATTCCTTGGGAAACCTTGCCTACGGAAATGACGCCTGATTATAAAAAACGGACCACTCTTTCAGGGAGTCGA ATGTTTATTTCAGCAACTGGAACGGCTATTGTCTTCTTTACCTTAGCTGTACTTAAGTCATTTAATAATCCTAATGCTTA TCTTTATACGGGAATTACTTGGACAGTCATTTTTGTCATTGCCATTTTCACTTCATGGCGAGCAAGCTGGGAACGTCCTT TAACTCCAGAATTTCTAGCAGAATTAGATGCTCAACCCCGACTTGGATTTAGTGGATTTATGAAAAAAACAGTGACAGAT TACTTAGGCACTTTCAAAAATAAATCATTCAGAAAACATTTATTGGTTTATCTCCTCTCATTTACAGGAAAAGATTTCTA TTCTACACTGCTCCCAACTTTTATCGTGATTGGATTGTCCGGAACATCTGCCAATGCTCCGTGGGTTCTCCAAGCACTCT CAGCATTTGGTATTCTATCGATCATTGCCGCAGTAAAATTAATGGTCACTCGTGGTCCGAAATATTTATTTACTTTGAGT TATTTGGCGATTATTGTGGCCATGTTAGGTTATTTTGTTATCTATTTGACAGGGATTAATAATCCAATGTGGATGCTTGT GATTGTTTCCATTATTTATCAACTTGGACGAGGAATTTTAGAATTTACTCCTTGGAATGTTTTCCCTTTTATACCCGATG TTGACCGAATTTTTACACATGGCGATAAAGCGGGCGTATATGCTTCTGTTATGACTTTCTTTCGTAAATCAACAGGGGCA CTTGCAACATATATTGCTGGTTGGGCTCTTGAAGAAATTGGATTTAATTCCACAACAATGACGACTCATGCAAATACACC ATTAGGTATTCAACACGGAATTATGTTGATTTTCATCTTTGTTCCAATTGGCTTGTTAGCAGCCGCATTGATTGCAGCTC GCACCTTTAAACTTAATCGAGCCAATCATGATATTTTAAAAGCAGAATTACAACGTCTTGAAGAAGGAGGCTCAAAAGCT GATGTAACTCTTGAAACACGTCAGGTCGTTGAATTACTGACAGGTCACTCTTATGAAAAATGTTGGCCTGACCAAGCAGA TATTTAA
Upstream 100 bases:
>100_bases TGGAGTAAGCGTTTCACAAAGTTCACAAATTAACAAAGTTTATGGAAAAATTTGTCAATTTTCACTGACAAAAATACAAA AATAGGAGAATCTGTTTAAA
Downstream 100 bases:
>100_bases TGACAAATGCTTAAAAGTTTACTGACAGGCGCTGTCAGTAAATTTATCGGAGAAAAACGATGGAAAATCAATTGTTAACA CTAAAAAATAATGAGCTTAC
Product: Na-galactoside symporter
Products: NA
Alternate protein names: Sugar Transporter; Facilitator Superfamily Transporter; Na-Galactoside Symporter; Sugar Transporter Subfamily; Facilitator Transporter; Sugar Symporter; Olgogalacturonide Transporter; Melibiose Carrier Protein; SodiumGalactoside Symporter Protein; Rhamnogalacturonide Transporter RhiT; NaGalactoside Symporter Family Permease; Na+/Melibiose Symporter; SugarCation Symporter Family Protein; Glycoside/Pentoside/HexuronideCation Symporter GPH Family; Sugar Transport Symporter; Facilitator Family Transporter
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MAEKQKTSWVYTPKAINTRRGLLYGLTDLMGGGWNNIVSGVIFVFVLSQGISPLFTGAVLGIGRIIDAVWSLFFGAITDR FYRTKLGQKYGRRHFFIALGGILFAILFPMFWISTSSWQYYLWVYVAIEVAISMILIPWETLPTEMTPDYKKRTTLSGSR MFISATGTAIVFFTLAVLKSFNNPNAYLYTGITWTVIFVIAIFTSWRASWERPLTPEFLAELDAQPRLGFSGFMKKTVTD YLGTFKNKSFRKHLLVYLLSFTGKDFYSTLLPTFIVIGLSGTSANAPWVLQALSAFGILSIIAAVKLMVTRGPKYLFTLS YLAIIVAMLGYFVIYLTGINNPMWMLVIVSIIYQLGRGILEFTPWNVFPFIPDVDRIFTHGDKAGVYASVMTFFRKSTGA LATYIAGWALEEIGFNSTTMTTHANTPLGIQHGIMLIFIFVPIGLLAAALIAARTFKLNRANHDILKAELQRLEEGGSKA DVTLETRQVVELLTGHSYEKCWPDQADI
Sequences:
>Translated_508_residues MAEKQKTSWVYTPKAINTRRGLLYGLTDLMGGGWNNIVSGVIFVFVLSQGISPLFTGAVLGIGRIIDAVWSLFFGAITDR FYRTKLGQKYGRRHFFIALGGILFAILFPMFWISTSSWQYYLWVYVAIEVAISMILIPWETLPTEMTPDYKKRTTLSGSR MFISATGTAIVFFTLAVLKSFNNPNAYLYTGITWTVIFVIAIFTSWRASWERPLTPEFLAELDAQPRLGFSGFMKKTVTD YLGTFKNKSFRKHLLVYLLSFTGKDFYSTLLPTFIVIGLSGTSANAPWVLQALSAFGILSIIAAVKLMVTRGPKYLFTLS YLAIIVAMLGYFVIYLTGINNPMWMLVIVSIIYQLGRGILEFTPWNVFPFIPDVDRIFTHGDKAGVYASVMTFFRKSTGA LATYIAGWALEEIGFNSTTMTTHANTPLGIQHGIMLIFIFVPIGLLAAALIAARTFKLNRANHDILKAELQRLEEGGSKA DVTLETRQVVELLTGHSYEKCWPDQADI >Mature_507_residues AEKQKTSWVYTPKAINTRRGLLYGLTDLMGGGWNNIVSGVIFVFVLSQGISPLFTGAVLGIGRIIDAVWSLFFGAITDRF YRTKLGQKYGRRHFFIALGGILFAILFPMFWISTSSWQYYLWVYVAIEVAISMILIPWETLPTEMTPDYKKRTTLSGSRM FISATGTAIVFFTLAVLKSFNNPNAYLYTGITWTVIFVIAIFTSWRASWERPLTPEFLAELDAQPRLGFSGFMKKTVTDY LGTFKNKSFRKHLLVYLLSFTGKDFYSTLLPTFIVIGLSGTSANAPWVLQALSAFGILSIIAAVKLMVTRGPKYLFTLSY LAIIVAMLGYFVIYLTGINNPMWMLVIVSIIYQLGRGILEFTPWNVFPFIPDVDRIFTHGDKAGVYASVMTFFRKSTGAL ATYIAGWALEEIGFNSTTMTTHANTPLGIQHGIMLIFIFVPIGLLAAALIAARTFKLNRANHDILKAELQRLEEGGSKAD VTLETRQVVELLTGHSYEKCWPDQADI
Specific function: Unknown
COG id: COG2211
COG function: function code G; Na+/melibiose symporter and related transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56928; Mature: 56796
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEKQKTSWVYTPKAINTRRGLLYGLTDLMGGGWNNIVSGVIFVFVLSQGISPLFTGAVL CCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GIGRIIDAVWSLFFGAITDRFYRTKLGQKYGRRHFFIALGGILFAILFPMFWISTSSWQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH YLWVYVAIEVAISMILIPWETLPTEMTPDYKKRTTLSGSRMFISATGTAIVFFTLAVLKS HHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH FNNPNAYLYTGITWTVIFVIAIFTSWRASWERPLTPEFLAELDAQPRLGFSGFMKKTVTD CCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH YLGTFKNKSFRKHLLVYLLSFTGKDFYSTLLPTFIVIGLSGTSANAPWVLQALSAFGILS HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHH IIAAVKLMVTRGPKYLFTLSYLAIIVAMLGYFVIYLTGINNPMWMLVIVSIIYQLGRGIL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE EFTPWNVFPFIPDVDRIFTHGDKAGVYASVMTFFRKSTGALATYIAGWALEEIGFNSTTM ECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE TTHANTPLGIQHGIMLIFIFVPIGLLAAALIAARTFKLNRANHDILKAELQRLEEGGSKA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC DVTLETRQVVELLTGHSYEKCWPDQADI EEEEHHHHHHHHHHCCCHHHCCCCCCCC >Mature Secondary Structure AEKQKTSWVYTPKAINTRRGLLYGLTDLMGGGWNNIVSGVIFVFVLSQGISPLFTGAVL CCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHH GIGRIIDAVWSLFFGAITDRFYRTKLGQKYGRRHFFIALGGILFAILFPMFWISTSSWQY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCHH YLWVYVAIEVAISMILIPWETLPTEMTPDYKKRTTLSGSRMFISATGTAIVFFTLAVLKS HHHHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHH FNNPNAYLYTGITWTVIFVIAIFTSWRASWERPLTPEFLAELDAQPRLGFSGFMKKTVTD CCCCCEEEEECHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHH YLGTFKNKSFRKHLLVYLLSFTGKDFYSTLLPTFIVIGLSGTSANAPWVLQALSAFGILS HHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHH IIAAVKLMVTRGPKYLFTLSYLAIIVAMLGYFVIYLTGINNPMWMLVIVSIIYQLGRGIL HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCE EFTPWNVFPFIPDVDRIFTHGDKAGVYASVMTFFRKSTGALATYIAGWALEEIGFNSTTM ECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEE TTHANTPLGIQHGIMLIFIFVPIGLLAAALIAARTFKLNRANHDILKAELQRLEEGGSKA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCC DVTLETRQVVELLTGHSYEKCWPDQADI EEEEHHHHHHHHHHCCCHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA