| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is uxaC
Identifier: 15673610
GI number: 15673610
Start: 1673004
End: 1674422
Strand: Reverse
Name: uxaC
Synonym: L0019
Alternate gene names: 15673610
Gene position: 1674422-1673004 (Counterclockwise)
Preceding gene: 15673611
Following gene: 15673609
Centisome position: 70.78
GC content: 34.04
Gene sequence:
>1419_bases ATGAAATTTTTATCAGAAGATTTTTTACTAACGAATGAAAGTGCCAAGATGCTTTTTCACAAACATGCAGAAAAAATGCC AATTATTGATTATCATTGCCATCTTGAACCCGCAGAAATTTATGAAAATAAAAAATATGAAAATTTAACACAAATTTGGC TAGGTGGGGATCATTATAAATGGCGTTTGCTCCGTGCGAATGGTATTCCTGAAAAATTGATTACTGGAGATGGAGAGGAT TATGAAAAGTTTTTAGCATTTGCTAAAACACTCGAAAAATCATTTGGTAATCCAATTTATGAATGGACTCATCTGGAATT AAAACGATTTTTCCATATTGATAAGTTGATTTCAAGCGAGACAGCCAAAGAAATTTGGGATGAAGCGAACCAAATGCTTG CCACAGATGATTTCAGACCACGCGCATTGATTAAAAATTCACAGGTAAAAGTTGTTTGTACAACAGATGACCCTGTTTCA ACGCTTTCTTATCATAAATTATTAGCCAAAGAGGAAAAAGATTTCAAAGTTTTGCCAGCTTTAAGACCAGACCATTTAAT TTCGATTACTGACGGACATTTTGCAGACTATTTGACAGAGCTGTCAGCAGTTTCTGGAATTGAAATAAAAGGTTTTAAGA CGATGATTAAGGCACTTGAACAAAGATTTGAATTTTTCACAAGCCTTGGTGGACGTTTGTCTGACCACTCCTTATCTACC TATACTTTTGCAGAAACTAAAAACGTGGATTTAGATTCTATCCTTCAGAAAGCCAAAGAAAATCAAACTTTAACGGACCT AGAATATAATCAATACATTACGGCATTAATCCTTGAAATTATGAAATTAAATAAAAAATTTGAATGGACAATGCAACTCC ATGTTAACGTCAACCGTTCTATCAATGGCCCAGCCTTAAGTAAAATTGGTGAAAATACTGGATTTGATAGTATGGGTACT CAAGCTAATATTTCTGAGGAATTAACCAAACTCTTTAGCAAAGCAGCAGAACTTGAAACCATACCAAAAACCATTCTATA CTCCCTTAATCAAAATGATTGGCTTGAATTAGTCACAATGATTGGCTGTTTTCAAGGTGAAGGAGTGCAACAATTACAAC TTGGAGCTGGTTGGTGGTTCAATGACACCAAAAAAGGAATGGAAAACCAATTAGAGATTTTTGCTTCACAAAGTTTATTG TCCAATTTTGTAGGAATGTTGACAGATTCACGGAGCTTTTTAAGTTATCCACGTCATGAATATTTCCGTCGCGTCCTCTG TAATTTTGTTGGACAGTTGATTGAAAATGGTAGAATCCCTGATAATGAAGCACTTGTTGGAAAAATGATTGAAGATATTA GTTATAATAATGTGCATGATTATTTTGGATTTTTCAAAGATGAGGACTCTAATCAATGA
Upstream 100 bases:
>100_bases AACAAGAACTCTTGCAAAAAGAAGGAAATATCAGCTTAAAATCAAATGAATCAAAAACTTATGAAGTTGAATTAACTTTT AATAGTAATAAAGGAGAATC
Downstream 100 bases:
>100_bases CTGAATTTATAACACTTGGCGAACCTTTAGTCGTTCTTGCCTCAGAAAATCAAGATATAAGTTTAGATGTAGCTGAGCAT TTCAGCAAATATTTAGCTGG
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase
Number of amino acids: Translated: 472; Mature: 472
Protein sequence:
>472_residues MKFLSEDFLLTNESAKMLFHKHAEKMPIIDYHCHLEPAEIYENKKYENLTQIWLGGDHYKWRLLRANGIPEKLITGDGED YEKFLAFAKTLEKSFGNPIYEWTHLELKRFFHIDKLISSETAKEIWDEANQMLATDDFRPRALIKNSQVKVVCTTDDPVS TLSYHKLLAKEEKDFKVLPALRPDHLISITDGHFADYLTELSAVSGIEIKGFKTMIKALEQRFEFFTSLGGRLSDHSLST YTFAETKNVDLDSILQKAKENQTLTDLEYNQYITALILEIMKLNKKFEWTMQLHVNVNRSINGPALSKIGENTGFDSMGT QANISEELTKLFSKAAELETIPKTILYSLNQNDWLELVTMIGCFQGEGVQQLQLGAGWWFNDTKKGMENQLEIFASQSLL SNFVGMLTDSRSFLSYPRHEYFRRVLCNFVGQLIENGRIPDNEALVGKMIEDISYNNVHDYFGFFKDEDSNQ
Sequences:
>Translated_472_residues MKFLSEDFLLTNESAKMLFHKHAEKMPIIDYHCHLEPAEIYENKKYENLTQIWLGGDHYKWRLLRANGIPEKLITGDGED YEKFLAFAKTLEKSFGNPIYEWTHLELKRFFHIDKLISSETAKEIWDEANQMLATDDFRPRALIKNSQVKVVCTTDDPVS TLSYHKLLAKEEKDFKVLPALRPDHLISITDGHFADYLTELSAVSGIEIKGFKTMIKALEQRFEFFTSLGGRLSDHSLST YTFAETKNVDLDSILQKAKENQTLTDLEYNQYITALILEIMKLNKKFEWTMQLHVNVNRSINGPALSKIGENTGFDSMGT QANISEELTKLFSKAAELETIPKTILYSLNQNDWLELVTMIGCFQGEGVQQLQLGAGWWFNDTKKGMENQLEIFASQSLL SNFVGMLTDSRSFLSYPRHEYFRRVLCNFVGQLIENGRIPDNEALVGKMIEDISYNNVHDYFGFFKDEDSNQ >Mature_472_residues MKFLSEDFLLTNESAKMLFHKHAEKMPIIDYHCHLEPAEIYENKKYENLTQIWLGGDHYKWRLLRANGIPEKLITGDGED YEKFLAFAKTLEKSFGNPIYEWTHLELKRFFHIDKLISSETAKEIWDEANQMLATDDFRPRALIKNSQVKVVCTTDDPVS TLSYHKLLAKEEKDFKVLPALRPDHLISITDGHFADYLTELSAVSGIEIKGFKTMIKALEQRFEFFTSLGGRLSDHSLST YTFAETKNVDLDSILQKAKENQTLTDLEYNQYITALILEIMKLNKKFEWTMQLHVNVNRSINGPALSKIGENTGFDSMGT QANISEELTKLFSKAAELETIPKTILYSLNQNDWLELVTMIGCFQGEGVQQLQLGAGWWFNDTKKGMENQLEIFASQSLL SNFVGMLTDSRSFLSYPRHEYFRRVLCNFVGQLIENGRIPDNEALVGKMIEDISYNNVHDYFGFFKDEDSNQ
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family
Homologues:
Organism=Escherichia coli, GI2367192, Length=464, Percent_Identity=46.9827586206897, Blast_Score=442, Evalue=1e-125,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UXAC_LACLA (Q9CF53)
Other databases:
- EMBL: AE005176 - PIR: D86828 - RefSeq: NP_267784.1 - ProteinModelPortal: Q9CF53 - SMR: Q9CF53 - GeneID: 1115288 - GenomeReviews: AE005176_GR - KEGG: lla:L0019 - NMPDR: fig|272623.1.peg.1670 - HOGENOM: HBG297087 - OMA: AWAKTVP - ProtClustDB: PRK02925 - BioCyc: LLAC272623:L0019-MONOMER - BRENDA: 5.3.1.12 - HAMAP: MF_00675 - InterPro: IPR003766 - InterPro: IPR023177 - Gene3D: G3DSA:1.10.2020.10
Pfam domain/function: PF02614 UxaC
EC number: =5.3.1.12
Molecular weight: Translated: 54414; Mature: 54414
Theoretical pI: Translated: 5.17; Mature: 5.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLSEDFLLTNESAKMLFHKHAEKMPIIDYHCHLEPAEIYENKKYENLTQIWLGGDHYK CCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCHHHEEECCCCEE WRLLRANGIPEKLITGDGEDYEKFLAFAKTLEKSFGNPIYEWTHLELKRFFHIDKLISSE EEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TAKEIWDEANQMLATDDFRPRALIKNSQVKVVCTTDDPVSTLSYHKLLAKEEKDFKVLPA HHHHHHHHHHHEEECCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEECCC LRPDHLISITDGHFADYLTELSAVSGIEIKGFKTMIKALEQRFEFFTSLGGRLSDHSLST CCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YTFAETKNVDLDSILQKAKENQTLTDLEYNQYITALILEIMKLNKKFEWTMQLHVNVNRS EEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC INGPALSKIGENTGFDSMGTQANISEELTKLFSKAAELETIPKTILYSLNQNDWLELVTM CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IGCFQGEGVQQLQLGAGWWFNDTKKGMENQLEIFASQSLLSNFVGMLTDSRSFLSYPRHE HHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH YFRRVLCNFVGQLIENGRIPDNEALVGKMIEDISYNNVHDYFGFFKDEDSNQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MKFLSEDFLLTNESAKMLFHKHAEKMPIIDYHCHLEPAEIYENKKYENLTQIWLGGDHYK CCCCCCCCEEECCHHHHHHHHHHCCCCEEEEECCCCHHHHHCCCCCCCHHHEEECCCCEE WRLLRANGIPEKLITGDGEDYEKFLAFAKTLEKSFGNPIYEWTHLELKRFFHIDKLISSE EEEEECCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH TAKEIWDEANQMLATDDFRPRALIKNSQVKVVCTTDDPVSTLSYHKLLAKEEKDFKVLPA HHHHHHHHHHHEEECCCCCCHHHCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEECCC LRPDHLISITDGHFADYLTELSAVSGIEIKGFKTMIKALEQRFEFFTSLGGRLSDHSLST CCCCCEEEECCCHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE YTFAETKNVDLDSILQKAKENQTLTDLEYNQYITALILEIMKLNKKFEWTMQLHVNVNRS EEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCC INGPALSKIGENTGFDSMGTQANISEELTKLFSKAAELETIPKTILYSLNQNDWLELVTM CCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IGCFQGEGVQQLQLGAGWWFNDTKKGMENQLEIFASQSLLSNFVGMLTDSRSFLSYPRHE HHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCHHH YFRRVLCNFVGQLIENGRIPDNEALVGKMIEDISYNNVHDYFGFFKDEDSNQ HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11337471