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The map label for this gene is yngB

Identifier: 15673309

GI number: 15673309

Start: 1362894

End: 1364516

Strand: Direct

Name: yngB

Synonym: L162597

Alternate gene names: 15673309

Gene position: 1362894-1364516 (Clockwise)

Preceding gene: 15673301

Following gene: 15673310

Centisome position: 57.61

GC content: 34.2

Gene sequence:

>1623_bases
ATGTCCTTTGATGGTATTTTTTTACACCACATGACGGCTGAACTTCAACCGTTGGTTGGTGGACGTATTCAAAAAATTAA
TCAACCTTTTGACCAAGAACTTGTTCTAACAGTTCGGTCAGCTGGTAAATCTCATAAACTTTTGCTGTCAGCGCATCCTG
TTTTTGGTCGTGTTCAGCTGACCAAAACTGATTTTCAAAATCCACAAAATCCAAATAATTTTGTGATGATTTTACGCAAA
TATTTGGCTGGCGCTTTTATTGAACAAATTGAACAAGTAGGCAATGATCGTCAGATTATTCTCCACATTTCAACCAAAGA
TGAAATTGGTGACAGTTTAAAAATTGCTTTAATTACAGAAATTATGGGTAAACATAGTAATATTATTCTACTAGAAAAAA
CCTCGCAAAAAATTATTGAATCCATTAAACATATTGGCTTTTCACAGAATCAATATCGCACAATTCTACCAGGTTCAACT
TATATTGCACCACCTTTAAATACTGCTATTGACCCTTTCAAAGCTACTGACGAAGAAATTTTTGAAGCTTTACAAACTGA
ACAATTACAACAAAAATTACAAGGAATCGGACGTGATTCTAAAAATGCGTTGACAGGTCTGTCAGTAAAAGAATTCAATG
AAAAATTACTGACAGTCACTCCATCAATTTATCCTAACGATACTTTTTCCAGTATCAAACTTGCTGACGAATTTGTAAGT
TTTGACAGCCTCTCTGAAATGCTTGATACTTACTATGCGGATAAGGCCGAACGTGACCGTGTTAAACAGGTTGCTGCTTC
TGTCATTAAAAAAATTCAAAATGAACTGAAGAAAAATCGTGATAAATTAAAAAAACAAGAACGAGAATTACTTGCGACTG
ACAACGCTGAAATTTTCCGTCAAAAAGGTGAACTGCTTAATACATTTTTGAATCAAGTTCCTAATGATAAAACAAGTGTA
ACTTTGGAAAATTACTATACTAATGAACCAATTGAAATTGCTCTAAATCCAGCTTTAAGTCCTGTTCAAAATGCTCAACG
TTACTTTCATCGTTATCAAAAATTGAAACAAGCCGTCAAATTTTTAGGAGAGCAAATTGCTAAAACCAAGGAAACGATTC
ATTATTTAGAATCTGTTGAATCAAATCTTGAAAATGCTGACGTTGCTGAAATTGCTGATATTCGTGAAGAATTAATTCAA
ACAGGCTATATTAAGCAAAAATATCGTAATAAAAAGCAAAAAATTCTCCCACCAGAAAAATATCAAGCTGAGGATGGAAC
AATTATTTTAGTAGGTAAAAATAACTTACAAAATGAACAAGTCAGTTTCAAACTTTCACGCCGTGGCGATCTTTGGTTTC
ACGTTAAGGATATTCCGGGAAGCCATGTTTTGATTACAGGAAATGCAAATCCATCTGATGAAACAATTACTTTTGCTGGG
GAATTAGCAGCTTATTTCAGCAAAGCACGCTATTCCAACCTTGTTCAAGTAGATGTTTTGGATGTCAAAAAATTACACAA
GCCAACAGGAACAGCTCCAGGGTTTGTTACTTATGACCGTGAAAAAACGATTCGAGTGACTCCTGACGAATCTGTCATTA
AATCTCGCAAAATTGGTAAGTAA

Upstream 100 bases:

>100_bases
TATTTACTGACAGGTTTGTCAATAAATTGAAAAGATATAATCACTCCCTAATTAACAGTGAAAACTGCTTATAAGAATTA
TAAAACGAAAGAGGCACCTA

Downstream 100 bases:

>100_bases
ATTTTACTGACAAAACTTAATTTTTATATTGGAGAACAAATGTCTGAAATCATCAACTGCCCTGTATGCAGCCACTTGCT
CATAAAGGAACAAAATACTT

Product: fibronectin-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 540; Mature: 539

Protein sequence:

>540_residues
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTVRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRK
YLAGAFIEQIEQVGNDRQIILHISTKDEIGDSLKIALITEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGST
YIAPPLNTAIDPFKATDEEIFEALQTEQLQQKLQGIGRDSKNALTGLSVKEFNEKLLTVTPSIYPNDTFSSIKLADEFVS
FDSLSEMLDTYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSV
TLENYYTNEPIEIALNPALSPVQNAQRYFHRYQKLKQAVKFLGEQIAKTKETIHYLESVESNLENADVAEIADIREELIQ
TGYIKQKYRNKKQKILPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNANPSDETITFAG
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDESVIKSRKIGK

Sequences:

>Translated_540_residues
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTVRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRK
YLAGAFIEQIEQVGNDRQIILHISTKDEIGDSLKIALITEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGST
YIAPPLNTAIDPFKATDEEIFEALQTEQLQQKLQGIGRDSKNALTGLSVKEFNEKLLTVTPSIYPNDTFSSIKLADEFVS
FDSLSEMLDTYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSV
TLENYYTNEPIEIALNPALSPVQNAQRYFHRYQKLKQAVKFLGEQIAKTKETIHYLESVESNLENADVAEIADIREELIQ
TGYIKQKYRNKKQKILPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNANPSDETITFAG
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDESVIKSRKIGK
>Mature_539_residues
SFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTVRSAGKSHKLLLSAHPVFGRVQLTKTDFQNPQNPNNFVMILRKY
LAGAFIEQIEQVGNDRQIILHISTKDEIGDSLKIALITEIMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTY
IAPPLNTAIDPFKATDEEIFEALQTEQLQQKLQGIGRDSKNALTGLSVKEFNEKLLTVTPSIYPNDTFSSIKLADEFVSF
DSLSEMLDTYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFRQKGELLNTFLNQVPNDKTSVT
LENYYTNEPIEIALNPALSPVQNAQRYFHRYQKLKQAVKFLGEQIAKTKETIHYLESVESNLENADVAEIADIREELIQT
GYIKQKYRNKKQKILPPEKYQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNANPSDETITFAGE
LAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDESVIKSRKIGK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SDCCAG1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008532
- InterPro:   IPR008616 [H]

Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]

EC number: NA

Molecular weight: Translated: 61286; Mature: 61155

Theoretical pI: Translated: 9.21; Mature: 9.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTVRSAGKSHKLLLSAHPVFGRVQL
CCCCCEEHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEE
TKTDFQNPQNPNNFVMILRKYLAGAFIEQIEQVGNDRQIILHISTKDEIGDSLKIALITE
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCHHHHHHHH
IMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTYIAPPLNTAIDPFKATDEEI
HHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHH
FEALQTEQLQQKLQGIGRDSKNALTGLSVKEFNEKLLTVTPSIYPNDTFSSIKLADEFVS
HHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
FDSLSEMLDTYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QKGELLNTFLNQVPNDKTSVTLENYYTNEPIEIALNPALSPVQNAQRYFHRYQKLKQAVK
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLGEQIAKTKETIHYLESVESNLENADVAEIADIREELIQTGYIKQKYRNKKQKILPPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
YQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNANPSDETITFAG
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEEEHH
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDESVIKSRKIGK
HHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCEEEECCCCEEEECCCHHHHHHCCCCC
>Mature Secondary Structure 
SFDGIFLHHMTAELQPLVGGRIQKINQPFDQELVLTVRSAGKSHKLLLSAHPVFGRVQL
CCCCEEHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHCCCCCCEEEEEECCCCCEEEE
TKTDFQNPQNPNNFVMILRKYLAGAFIEQIEQVGNDRQIILHISTKDEIGDSLKIALITE
EHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCHHHHHHHH
IMGKHSNIILLEKTSQKIIESIKHIGFSQNQYRTILPGSTYIAPPLNTAIDPFKATDEEI
HHCCCCCEEEEECCHHHHHHHHHHCCCCCCCCEEECCCCCEECCCCCCCCCCCCCCHHHH
FEALQTEQLQQKLQGIGRDSKNALTGLSVKEFNEKLLTVTPSIYPNDTFSSIKLADEFVS
HHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHH
FDSLSEMLDTYYADKAERDRVKQVAASVIKKIQNELKKNRDKLKKQERELLATDNAEIFR
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
QKGELLNTFLNQVPNDKTSVTLENYYTNEPIEIALNPALSPVQNAQRYFHRYQKLKQAVK
HHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
FLGEQIAKTKETIHYLESVESNLENADVAEIADIREELIQTGYIKQKYRNKKQKILPPEK
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCC
YQAEDGTIILVGKNNLQNEQVSFKLSRRGDLWFHVKDIPGSHVLITGNANPSDETITFAG
CCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCEEEEECCCCCCCCEEEEHH
ELAAYFSKARYSNLVQVDVLDVKKLHKPTGTAPGFVTYDREKTIRVTPDESVIKSRKIGK
HHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCEEEECCCCEEEECCCHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377; 9534248 [H]