| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
Click here to switch to the map view.
The map label for this gene is ylcF
Identifier: 15673098
GI number: 15673098
Start: 1128168
End: 1129412
Strand: Direct
Name: ylcF
Synonym: L127902
Alternate gene names: NA
Gene position: 1128168-1129412 (Clockwise)
Preceding gene: 15673097
Following gene: 15673099
Centisome position: 47.69
GC content: 33.9
Gene sequence:
>1245_bases ATGAATGAAGAATTATATAATTTTTTACTGGGAAAAATATTTTATTTTTGTCAATTGCCAAGCTATACAAAATGGGGAAT CTGGTCATTTGAACCTGACGGTAAGATAAAAGGAATGCATAGTGACTTTGAACAAACATGGAAAATTGAAAATGGGCGGC TATTAATTTTAGATAGTCAAGGGCACATCACTTGTATTTTTGAAGGTCAGATAGAAAAAATGCAAAAAAGTCATTTGCTT CATCCAGGAATGGAACATTTTCAAGTTGCTTTGATTGCTACTGATTTAATCGGTTATGATTATTTTGATAGCCTTTGCCC GATTGAAAATGATTTAGTTGCAGCATGTATGGAAACAGGGTCAGTGGCAAATGAAAAACTACGTCAGCTTCTTTTAGAAG ATAAAACCATTGACGGTTATTATGCCGGTCGGGCTTATGCTGTTAAGAGAAAAGATTTAGAAATTGGATTAAAGCAATAT AAAGGAGTTTTTTATGATTTAGAGCTTTCGCAAAACCAGCCTGATTTTTTTACTAAAAAACTTTTGGTTTGGTTCCCAGG ACTATTGAGCTACAATCACGGGAATGCTCGGGAAAACTTCTTTCCTAATCCTTTTGAAGGAATTACAGGCTATATTGCTA AAAATACAGTGGTATTAAGAATTGCCGATAGTAATTTAATTAATGGTTCTTATTATCTCAACACTCCCAATTTTAGAGAT TATGAACAAAATATTCAGGAATTAATCGCAAAAACAGCCGAAGAAGAAGGGATACTTAGGGAGAATATACTATGTGCCGG TTCTTCCCGCGGGGGTATGGGTGCACTTTACCATGGATTACTTGGAAATTATGCACTTGTATCAATGGATCCTGTTGTAG ATCGTAGTCCCTGGTTGCAATCTGCTGATGTTCAATTAATGTTTGATTGTATTCCTGTTTCATTCGTAGATAAGCTCAAT CAATTATTGGAAAAAACAAATTTATCAGCTGAAAAAATACAAGTAATAACAAGCCCTCAAGTTCCGATTACTTATCCATT TATTATTCAGTTAAAAATTTGGAAGTTAGCACTTAAAACTTATCGTATGAAGTTGACAGATGAACAATTTGATTATCAGC CCTATGGTGGGAAAATGCATGGAGATTTTGTAAATCGTAATATCCCCCTGCTCTTGATGAAAATTAATGAATTTCTTTAT GGATGCGATTCAATAGAGAATACGATAGATGAAAAAACCTTGTAA
Upstream 100 bases:
>100_bases GGCAACTACAATATTCAATTTAATTTCACAGACATTACAGGACAAATCGTAAAAGCAAATGCAACAGTCATCATAAATTA AACAAAAAGGGAAAAACAAA
Downstream 100 bases:
>100_bases ATAATCAAGGTTTTTGATTATCCTCCAAATATAAAAATGGATGAAAAATTATTGAAAAAATGATATGATAACGACATATA TTAATTATTTTTGGATAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MNEELYNFLLGKIFYFCQLPSYTKWGIWSFEPDGKIKGMHSDFEQTWKIENGRLLILDSQGHITCIFEGQIEKMQKSHLL HPGMEHFQVALIATDLIGYDYFDSLCPIENDLVAACMETGSVANEKLRQLLLEDKTIDGYYAGRAYAVKRKDLEIGLKQY KGVFYDLELSQNQPDFFTKKLLVWFPGLLSYNHGNARENFFPNPFEGITGYIAKNTVVLRIADSNLINGSYYLNTPNFRD YEQNIQELIAKTAEEEGILRENILCAGSSRGGMGALYHGLLGNYALVSMDPVVDRSPWLQSADVQLMFDCIPVSFVDKLN QLLEKTNLSAEKIQVITSPQVPITYPFIIQLKIWKLALKTYRMKLTDEQFDYQPYGGKMHGDFVNRNIPLLLMKINEFLY GCDSIENTIDEKTL
Sequences:
>Translated_414_residues MNEELYNFLLGKIFYFCQLPSYTKWGIWSFEPDGKIKGMHSDFEQTWKIENGRLLILDSQGHITCIFEGQIEKMQKSHLL HPGMEHFQVALIATDLIGYDYFDSLCPIENDLVAACMETGSVANEKLRQLLLEDKTIDGYYAGRAYAVKRKDLEIGLKQY KGVFYDLELSQNQPDFFTKKLLVWFPGLLSYNHGNARENFFPNPFEGITGYIAKNTVVLRIADSNLINGSYYLNTPNFRD YEQNIQELIAKTAEEEGILRENILCAGSSRGGMGALYHGLLGNYALVSMDPVVDRSPWLQSADVQLMFDCIPVSFVDKLN QLLEKTNLSAEKIQVITSPQVPITYPFIIQLKIWKLALKTYRMKLTDEQFDYQPYGGKMHGDFVNRNIPLLLMKINEFLY GCDSIENTIDEKTL >Mature_414_residues MNEELYNFLLGKIFYFCQLPSYTKWGIWSFEPDGKIKGMHSDFEQTWKIENGRLLILDSQGHITCIFEGQIEKMQKSHLL HPGMEHFQVALIATDLIGYDYFDSLCPIENDLVAACMETGSVANEKLRQLLLEDKTIDGYYAGRAYAVKRKDLEIGLKQY KGVFYDLELSQNQPDFFTKKLLVWFPGLLSYNHGNARENFFPNPFEGITGYIAKNTVVLRIADSNLINGSYYLNTPNFRD YEQNIQELIAKTAEEEGILRENILCAGSSRGGMGALYHGLLGNYALVSMDPVVDRSPWLQSADVQLMFDCIPVSFVDKLN QLLEKTNLSAEKIQVITSPQVPITYPFIIQLKIWKLALKTYRMKLTDEQFDYQPYGGKMHGDFVNRNIPLLLMKINEFLY GCDSIENTIDEKTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47478; Mature: 47478
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEELYNFLLGKIFYFCQLPSYTKWGIWSFEPDGKIKGMHSDFEQTWKIENGRLLILDSQ CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCHHHHEEECCCEEEEEECC GHITCIFEGQIEKMQKSHLLHPGMEHFQVALIATDLIGYDYFDSLCPIENDLVAACMETG CCEEEEECCHHHHHHHHHCCCCCHHHHEEHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHC SVANEKLRQLLLEDKTIDGYYAGRAYAVKRKDLEIGLKQYKGVFYDLELSQNQPDFFTKK CHHHHHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHCCEEEEEEECCCCCHHHHHH LLVWFPGLLSYNHGNARENFFPNPFEGITGYIAKNTVVLRIADSNLINGSYYLNTPNFRD HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHEEECCEEEEEEECCCEECCEEEECCCCCCH YEQNIQELIAKTAEEEGILRENILCAGSSRGGMGALYHGLLGNYALVSMDPVVDRSPWLQ HHHHHHHHHHHHHHHCCCHHHCEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCC SADVQLMFDCIPVSFVDKLNQLLEKTNLSAEKIQVITSPQVPITYPFIIQLKIWKLALKT CCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEECCEEEEEHHHHHHHHH YRMKLTDEQFDYQPYGGKMHGDFVNRNIPLLLMKINEFLYGCDSIENTIDEKTL HHEEECCCCCCCCCCCCEECCCHHCCCCCEEEEEHHHHHHCCHHHHHHHHHCCC >Mature Secondary Structure MNEELYNFLLGKIFYFCQLPSYTKWGIWSFEPDGKIKGMHSDFEQTWKIENGRLLILDSQ CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCEECCCCCHHHHEEECCCEEEEEECC GHITCIFEGQIEKMQKSHLLHPGMEHFQVALIATDLIGYDYFDSLCPIENDLVAACMETG CCEEEEECCHHHHHHHHHCCCCCHHHHEEHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHC SVANEKLRQLLLEDKTIDGYYAGRAYAVKRKDLEIGLKQYKGVFYDLELSQNQPDFFTKK CHHHHHHHHHHHCCCCCCCEECCEEEEEECCHHHHHHHHHCCEEEEEEECCCCCHHHHHH LLVWFPGLLSYNHGNARENFFPNPFEGITGYIAKNTVVLRIADSNLINGSYYLNTPNFRD HHHHCCHHHCCCCCCCCCCCCCCCHHHHHHEEECCEEEEEEECCCEECCEEEECCCCCCH YEQNIQELIAKTAEEEGILRENILCAGSSRGGMGALYHGLLGNYALVSMDPVVDRSPWLQ HHHHHHHHHHHHHHHCCCHHHCEEEECCCCCCHHHHHHHHHCCEEEEEECCCCCCCCCCC SADVQLMFDCIPVSFVDKLNQLLEKTNLSAEKIQVITSPQVPITYPFIIQLKIWKLALKT CCCCEEEEEECCHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEECCEEEEEHHHHHHHHH YRMKLTDEQFDYQPYGGKMHGDFVNRNIPLLLMKINEFLYGCDSIENTIDEKTL HHEEECCCCCCCCCCCCEECCCHHCCCCCEEEEEHHHHHHCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA