| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is ykjA
Identifier: 15673062
GI number: 15673062
Start: 1090943
End: 1091278
Strand: Direct
Name: ykjA
Synonym: L90693
Alternate gene names: 15673062
Gene position: 1090943-1091278 (Clockwise)
Preceding gene: 15673061
Following gene: 15673063
Centisome position: 46.12
GC content: 38.69
Gene sequence:
>336_bases ATGATTGAAGCTTGTATCAGGACAAAAAGAGACAAAATTGTTTCTTATGAAATCTCAGGACATGCTGAATCTGGCGAGTA TGGACACGATGTAGTTTGTGCGGCGGTCAGCGTTCTATCAATTACAACGGCAAATAATATCTACGAGATGGCTCACATTA AACCTGTGACTCAGATGGAAGATGGTTACTTGTATGTTGAAATTCCTTTGAGCATACCTGAAAAACAAGGCGTATTGGCT CAAACTTTGCTCGAAGCTTTTGCAAATTCGATGAAAGCAGTTGAGAAAAGCTATGGTCAGTACATTACACTTAAATTTGA AAATGGAGGGCAATAA
Upstream 100 bases:
>100_bases TTGTTACTTTCCAATACAAACCTAAAAAACACTCACACCGTAAACAAGGTCACCGTCAACCATACACTAAAGTTGTTATC AAATCAGTTAACGCTTAATT
Downstream 100 bases:
>100_bases CATGCTTGAACTTAATCTGCAACTCTTCGCCCACAAAAAAGGTGGGGGTTCTACTTCCAATGGACGTGACTCACAAGCTA AACGTCTCGGTGCTAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MIEACIRTKRDKIVSYEISGHAESGEYGHDVVCAAVSVLSITTANNIYEMAHIKPVTQMEDGYLYVEIPLSIPEKQGVLA QTLLEAFANSMKAVEKSYGQYITLKFENGGQ
Sequences:
>Translated_111_residues MIEACIRTKRDKIVSYEISGHAESGEYGHDVVCAAVSVLSITTANNIYEMAHIKPVTQMEDGYLYVEIPLSIPEKQGVLA QTLLEAFANSMKAVEKSYGQYITLKFENGGQ >Mature_111_residues MIEACIRTKRDKIVSYEISGHAESGEYGHDVVCAAVSVLSITTANNIYEMAHIKPVTQMEDGYLYVEIPLSIPEKQGVLA QTLLEAFANSMKAVEKSYGQYITLKFENGGQ
Specific function: Unknown
COG id: COG2868
COG function: function code J; Predicted ribosomal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.genitalium MG233 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007422 [H]
Pfam domain/function: PF04327 DUF464 [H]
EC number: NA
Molecular weight: Translated: 12247; Mature: 12247
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEACIRTKRDKIVSYEISGHAESGEYGHDVVCAAVSVLSITTANNIYEMAHIKPVTQME CCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCC DGYLYVEIPLSIPEKQGVLAQTLLEAFANSMKAVEKSYGQYITLKFENGGQ CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC >Mature Secondary Structure MIEACIRTKRDKIVSYEISGHAESGEYGHDVVCAAVSVLSITTANNIYEMAHIKPVTQME CCCHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHCCCCCCCC DGYLYVEIPLSIPEKQGVLAQTLLEAFANSMKAVEKSYGQYITLKFENGGQ CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1942049; 9384377; 3918016 [H]