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The map label for this gene is dnaD

Identifier: 15673052

GI number: 15673052

Start: 1083162

End: 1083830

Strand: Direct

Name: dnaD

Synonym: L0285

Alternate gene names: 15673052

Gene position: 1083162-1083830 (Clockwise)

Preceding gene: 15673051

Following gene: 15673053

Centisome position: 45.79

GC content: 35.72

Gene sequence:

>669_bases
ATGAATTATTACGATGAATATAGCAAAGGGCATCTTGTCTTACCAAATGTGATTTTAGCACATTTTAGTAAGCTTTTCCC
TTCTGCTTTTGATTTTTTGATTTGGTTATACTTTTTTGAAAATCAAGATATTGCACCTAGTGAAATTGCTGAAAAAACAG
GTAAAAAATTATCGGAGGTCAATCTGGCCATTGATAATCTGTCCAAATTTGGAGCAATGAAGGTGACTTTAATTGAAATT
GATGGAGACATGGAAACTTTCTTTGATATTAGCCCGGCCTTTAAGCACTTAGATGAAATTTTGGGTGGTGCTGTTGCGAG
TTCAACTCCAGAGAATGAAAAAGTTCAGGAAGAGGGGCAGCTTAAAGAATTAGTTAGCATGTTTGAAGCAGAAATGGGCA
TGATTTCTCCTGTACAAATGGAAGAATTGAGAGCTTGGCTGTTTGAAGATGGTTATGACTTTTCGTTGATTAAACAAGCT
TTGCGTGAAGCAGTCCTCAATCGTAAGGTATCTTTAAATTACATTAAAGCTATTTTACGAAATTGGAAAAATGATGGGGT
GAATTCTCTTCAAGCGATTGAGAGTCGACAAATGGAACGCGAAGAAGCTAAGAGAAAGAAACCACAAGAAGATTTTTATA
TTCCTTTGGATGGACCATGGAATAGTTAA

Upstream 100 bases:

>100_bases
TAAAATAATTGATTAAAAATTTTCTAAAGTTTAACTGATTTAAGTAGTTTTTATGTGAAGTTCATTGAACCATAATGACG
CGATATGCTATAATAGTTCT

Downstream 100 bases:

>100_bases
TAGAGATAATGGACGTGCACGATGTTAAGTAAAAAAAGATATCTTGAAGCTTTAGAAATTATTGAAGACATGTTCCCGCA
AGCTCACGGAGAATTAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MNYYDEYSKGHLVLPNVILAHFSKLFPSAFDFLIWLYFFENQDIAPSEIAEKTGKKLSEVNLAIDNLSKFGAMKVTLIEI
DGDMETFFDISPAFKHLDEILGGAVASSTPENEKVQEEGQLKELVSMFEAEMGMISPVQMEELRAWLFEDGYDFSLIKQA
LREAVLNRKVSLNYIKAILRNWKNDGVNSLQAIESRQMEREEAKRKKPQEDFYIPLDGPWNS

Sequences:

>Translated_222_residues
MNYYDEYSKGHLVLPNVILAHFSKLFPSAFDFLIWLYFFENQDIAPSEIAEKTGKKLSEVNLAIDNLSKFGAMKVTLIEI
DGDMETFFDISPAFKHLDEILGGAVASSTPENEKVQEEGQLKELVSMFEAEMGMISPVQMEELRAWLFEDGYDFSLIKQA
LREAVLNRKVSLNYIKAILRNWKNDGVNSLQAIESRQMEREEAKRKKPQEDFYIPLDGPWNS
>Mature_222_residues
MNYYDEYSKGHLVLPNVILAHFSKLFPSAFDFLIWLYFFENQDIAPSEIAEKTGKKLSEVNLAIDNLSKFGAMKVTLIEI
DGDMETFFDISPAFKHLDEILGGAVASSTPENEKVQEEGQLKELVSMFEAEMGMISPVQMEELRAWLFEDGYDFSLIKQA
LREAVLNRKVSLNYIKAILRNWKNDGVNSLQAIESRQMEREEAKRKKPQEDFYIPLDGPWNS

Specific function: Probable component of primosome involved in the initiation of DNA replication [H]

COG id: COG3935

COG function: function code L; Putative primosome component and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006343 [H]

Pfam domain/function: PF07261 DnaB_2 [H]

EC number: NA

Molecular weight: Translated: 25515; Mature: 25515

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYYDEYSKGHLVLPNVILAHFSKLFPSAFDFLIWLYFFENQDIAPSEIAEKTGKKLSEV
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NLAIDNLSKFGAMKVTLIEIDGDMETFFDISPAFKHLDEILGGAVASSTPENEKVQEEGQ
HHHHHHHHHHCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
LKELVSMFEAEMGMISPVQMEELRAWLFEDGYDFSLIKQALREAVLNRKVSLNYIKAILR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
NWKNDGVNSLQAIESRQMEREEAKRKKPQEDFYIPLDGPWNS
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
>Mature Secondary Structure
MNYYDEYSKGHLVLPNVILAHFSKLFPSAFDFLIWLYFFENQDIAPSEIAEKTGKKLSEV
CCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
NLAIDNLSKFGAMKVTLIEIDGDMETFFDISPAFKHLDEILGGAVASSTPENEKVQEEGQ
HHHHHHHHHHCCEEEEEEEECCCHHHHHCCCHHHHHHHHHHCCHHHCCCCCCHHHHHHHH
LKELVSMFEAEMGMISPVQMEELRAWLFEDGYDFSLIKQALREAVLNRKVSLNYIKAILR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHH
NWKNDGVNSLQAIESRQMEREEAKRKKPQEDFYIPLDGPWNS
HHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704260; 8760912; 9384377 [H]