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The map label for this gene is ykhE

Identifier: 15673043

GI number: 15673043

Start: 1072934

End: 1073326

Strand: Direct

Name: ykhE

Synonym: L72684

Alternate gene names: 15673043

Gene position: 1072934-1073326 (Clockwise)

Preceding gene: 15673041

Following gene: 15673044

Centisome position: 45.36

GC content: 30.03

Gene sequence:

>393_bases
ATGATTAAAATTTATCTTAGTGGTTCATGTTCATCTTGTAGAAAAGCTAAAAAATGGTTACGTAAACATCACATTGAATT
TGAAGAAATTAATTTATCAAAAGATTTTATGGAAAAAGATGATTTAATCAAAATTTTATCCTTGACTGAAAACGGATTTG
AGGATATAATTGCGACTCGAGGGAAAACATACGCATCTTTAAATTATAATTTCGATGAATTAGGACTAGAAAAAGCTTTT
GGATTAATTCAGGAAAATCCACGTCTTCTAAAACGACCATTAATTTTTGACGAGGACTGTCTATTGATTGGTTTTAACGA
GGATGGAATCAGAGCGTTTATTCCACCAGAAGTTAGGAGAATTGAATTGCGTGAAAGATTAATTTTAGTCTAA

Upstream 100 bases:

>100_bases
AGAAATTGATTACAATTCTAAAAAAATATTTATTTTCCCCTTTTAATTAAGGCGCTTTCATGTTAGAATAGAAATATGAA
AAAATAGATAGGGAGAAAAT

Downstream 100 bases:

>100_bases
TATTAATTTTATTTTTAGCTTATCAGATCTGGTAAGCTTTTTAATTTTAAGAATTTGGAAGAACTACAAAAAGCTTGCCT
TAAATGCTATAATAGAAGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MIKIYLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENGFEDIIATRGKTYASLNYNFDELGLEKAF
GLIQENPRLLKRPLIFDEDCLLIGFNEDGIRAFIPPEVRRIELRERLILV

Sequences:

>Translated_130_residues
MIKIYLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENGFEDIIATRGKTYASLNYNFDELGLEKAF
GLIQENPRLLKRPLIFDEDCLLIGFNEDGIRAFIPPEVRRIELRERLILV
>Mature_130_residues
MIKIYLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENGFEDIIATRGKTYASLNYNFDELGLEKAF
GLIQENPRLLKRPLIFDEDCLLIGFNEDGIRAFIPPEVRRIELRERLILV

Specific function: Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes invo

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family. Spx subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 15219; Mature: 15219

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIYLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENGFEDIIATR
CEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHHCCCCHHHHHHCC
GKTYASLNYNFDELGLEKAFGLIQENPRLLKRPLIFDEDCLLIGFNEDGIRAFIPPEVRR
CCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCEECCCEEEEEECCCCCEEECCCHHHH
IELRERLILV
HHHHHHEECC
>Mature Secondary Structure
MIKIYLSGSCSSCRKAKKWLRKHHIEFEEINLSKDFMEKDDLIKILSLTENGFEDIIATR
CEEEEECCCCHHHHHHHHHHHHHCCCCEEECCCHHHHCHHHHHHHHHHCCCCHHHHHHCC
GKTYASLNYNFDELGLEKAFGLIQENPRLLKRPLIFDEDCLLIGFNEDGIRAFIPPEVRR
CCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCEECCCEEEEEECCCCCEEECCCHHHH
IELRERLILV
HHHHHHEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12397186 [H]