| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is pi230
Identifier: 15673019
GI number: 15673019
Start: 1052930
End: 1054708
Strand: Direct
Name: pi230
Synonym: L52677
Alternate gene names: 15673019
Gene position: 1052930-1054708 (Clockwise)
Preceding gene: 15673018
Following gene: 15673020
Centisome position: 44.51
GC content: 34.91
Gene sequence:
>1779_bases GTGGTGGAAGTGGATAATTTTGAAACTGCTATCCAATGGTCAAAGGATGTTATTTCAGGTAATACTCTTGCGAATATTGA ACAGAAACAAGCGGCTCAACGATTTTTAGATGACCTTGAATCTGATAAGTGGGATTTTAAACATCATCAGTTTGATTTCG TGATTGGCTTAATTGAAGGAACGATTGTACACGTTCAAGGCGAAAACAAGGAAGGGAAATCATTTAAAGATACCCCGATG TATTTGCAACCTTGGCAAAAATTTGTCTGCGTAAACTTATTTGGTTTTTTTGAAAAGGGTACAAATATTAGGCGTTTCAA CGAGGCGCTTATTTTTTTACCTCGTAAGCAAGGAAAAACTGCATTTGCTGCTTCATTAACTTGGGCAAAAAATATTGTTG ACCGAGCAAGTGGAAGTAAGACTTATATTGTTGCCAATTCTTTAAAGCAAACACAAGAAAGTTTTGGTTTTCTCACCTAC AACGTTGAGAAAATACGTAATGACGTCAAAAAAATGCGTATCCGTGATAATAACCAAGAGCATTCTGTCCATGTTGATTT TGGAGATGGCTACTGCGATATTTTTGCTATCGCCAATCAAGACGACAAACTAGACTCTTTGAACGGGAATGCGTTAATTC TTGATGAAATCCACTCATGGAAAAAAGCTGGTGCAAAAAAATACATCTTGATGAAAAACTCTCAGAAAGCTTATCGAAAT AAGTTGCTTATGGGGATTTCAACCGCTGGGGATATTGCTAATGGGTTTCTTGCTCAGAGGGTAACCACTTTAAAAAAAGT TTTATCCGGCACGATTAAAGATAAAGCTTATGATTCATACTTTATTTTTCTATGTACTGCTGAACAAGATGAAAAAGGGA ATATCATTAATCCAGTTACAAGAGAAATTACCACAATTGATGATCCAGAGGTTTTAGCTTCTGTTACCCCATCACTTGAT GTCACAGTGACTTTAGATGATTTAATCACCGAAGCAAGACAAGCATTACTTGAACCTCAACTTAAAGCAGAGTTCCTAAA TAAGTCACTTAATATTTTCACCAATTCAATGGATGCTTACTTTGATATTGACGAGTTTAGATTTTCTAATAAGCAACATT CTTGGACAATGGAGGAATTATCAAAACTACCAATCACTTGGTATGGGGGAGCTGACCTTTCTAAAATGCATGACTTGACC GCTTCAGCACTATATGGAAATTATGAGTATAAAGGTAAATCAATTGATATTGTTATTACTCATGCATTCTTTCCAAAATC TAGAGCAATTGAAAAAGCACAAGAAGATGACATTCCTTTATTTGAATGGCAGGAAGAAGGATGGGCGACACTATCCAATA CGGAAACTGTTCTTTATGATGATATTGTCAAATGGTTCATGGAAATGCGAGATAAAGGATTCAAAATAAAATCAGTCCAT TTTGATAAAAAGTTTGGTCGTGAATTTTTCATGATGATGAAAAAACAAAAATTCAAAATGGTTGATGCACCTCAACAATT CTGGAAAAAATCGGAAGGGTTTCGAAGAATTGAATTTAAGGCTAAAAATAAAGAATTATATTATGTGAATAATATGGCCT ATGAGTATTGTGTTGCCAATGTGAAAGCAATTGAAAAAACAGATGATGCGATTCAATTTGAAAAAGTAATGCCTAACCAA AGGATTGACTTATTTGATGCTTCAGTATTTGCAAGTCGTGGAATGCTTGAAGAAAAAGAACAAAAGAGTAAAAAAGATGC CTGGGGTATCGGAAATTAG
Upstream 100 bases:
>100_bases TCAAATCAACTCATGCTGAACCCGAAAAGTCAAAGAGATTCTGAAACTAAACCAGAAGAAAAAACTTCACCGTTTGCTCT ATTTATGAGTCAGAGTGGCG
Downstream 100 bases:
>100_bases GAAGGATAAAAATTTGAAGTTTTTTAATAACAAAAGAAGTCCAACAGAAGAATCAAAAGCAAAAGATGAAATACCCAAAG CGCCACAAGTTGTAATGACT
Product: terminase
Products: NA
Alternate protein names: Terminase; Terminase Large Subunit; Phage Terminase; Prophage; Phage Terminase-Like Protein Large Subunit; Phage Terminase-Like Protein; Phage-Related Terminase Large Subunit; Bacteriophage Terminase Large Subunit; Prophage LambdaSa; Phage-Terminase Large Subunit; C-Terminal Part Of Phage Terminase; Prophage Lp3 Terminase Large Subunit; Phage Large Terminase Subunit; Bacteriophage Terminase-Like Protein Large Subunit; Terminase-Large Subunit; Phage Related Terminase Large Sub-Unit
Number of amino acids: Translated: 592; Mature: 592
Protein sequence:
>592_residues MVEVDNFETAIQWSKDVISGNTLANIEQKQAAQRFLDDLESDKWDFKHHQFDFVIGLIEGTIVHVQGENKEGKSFKDTPM YLQPWQKFVCVNLFGFFEKGTNIRRFNEALIFLPRKQGKTAFAASLTWAKNIVDRASGSKTYIVANSLKQTQESFGFLTY NVEKIRNDVKKMRIRDNNQEHSVHVDFGDGYCDIFAIANQDDKLDSLNGNALILDEIHSWKKAGAKKYILMKNSQKAYRN KLLMGISTAGDIANGFLAQRVTTLKKVLSGTIKDKAYDSYFIFLCTAEQDEKGNIINPVTREITTIDDPEVLASVTPSLD VTVTLDDLITEARQALLEPQLKAEFLNKSLNIFTNSMDAYFDIDEFRFSNKQHSWTMEELSKLPITWYGGADLSKMHDLT ASALYGNYEYKGKSIDIVITHAFFPKSRAIEKAQEDDIPLFEWQEEGWATLSNTETVLYDDIVKWFMEMRDKGFKIKSVH FDKKFGREFFMMMKKQKFKMVDAPQQFWKKSEGFRRIEFKAKNKELYYVNNMAYEYCVANVKAIEKTDDAIQFEKVMPNQ RIDLFDASVFASRGMLEEKEQKSKKDAWGIGN
Sequences:
>Translated_592_residues MVEVDNFETAIQWSKDVISGNTLANIEQKQAAQRFLDDLESDKWDFKHHQFDFVIGLIEGTIVHVQGENKEGKSFKDTPM YLQPWQKFVCVNLFGFFEKGTNIRRFNEALIFLPRKQGKTAFAASLTWAKNIVDRASGSKTYIVANSLKQTQESFGFLTY NVEKIRNDVKKMRIRDNNQEHSVHVDFGDGYCDIFAIANQDDKLDSLNGNALILDEIHSWKKAGAKKYILMKNSQKAYRN KLLMGISTAGDIANGFLAQRVTTLKKVLSGTIKDKAYDSYFIFLCTAEQDEKGNIINPVTREITTIDDPEVLASVTPSLD VTVTLDDLITEARQALLEPQLKAEFLNKSLNIFTNSMDAYFDIDEFRFSNKQHSWTMEELSKLPITWYGGADLSKMHDLT ASALYGNYEYKGKSIDIVITHAFFPKSRAIEKAQEDDIPLFEWQEEGWATLSNTETVLYDDIVKWFMEMRDKGFKIKSVH FDKKFGREFFMMMKKQKFKMVDAPQQFWKKSEGFRRIEFKAKNKELYYVNNMAYEYCVANVKAIEKTDDAIQFEKVMPNQ RIDLFDASVFASRGMLEEKEQKSKKDAWGIGN >Mature_592_residues MVEVDNFETAIQWSKDVISGNTLANIEQKQAAQRFLDDLESDKWDFKHHQFDFVIGLIEGTIVHVQGENKEGKSFKDTPM YLQPWQKFVCVNLFGFFEKGTNIRRFNEALIFLPRKQGKTAFAASLTWAKNIVDRASGSKTYIVANSLKQTQESFGFLTY NVEKIRNDVKKMRIRDNNQEHSVHVDFGDGYCDIFAIANQDDKLDSLNGNALILDEIHSWKKAGAKKYILMKNSQKAYRN KLLMGISTAGDIANGFLAQRVTTLKKVLSGTIKDKAYDSYFIFLCTAEQDEKGNIINPVTREITTIDDPEVLASVTPSLD VTVTLDDLITEARQALLEPQLKAEFLNKSLNIFTNSMDAYFDIDEFRFSNKQHSWTMEELSKLPITWYGGADLSKMHDLT ASALYGNYEYKGKSIDIVITHAFFPKSRAIEKAQEDDIPLFEWQEEGWATLSNTETVLYDDIVKWFMEMRDKGFKIKSVH FDKKFGREFFMMMKKQKFKMVDAPQQFWKKSEGFRRIEFKAKNKELYYVNNMAYEYCVANVKAIEKTDDAIQFEKVMPNQ RIDLFDASVFASRGMLEEKEQKSKKDAWGIGN
Specific function: Unknown
COG id: COG4626
COG function: function code R; Phage terminase-like protein, large subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68285; Mature: 68285
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEVDNFETAIQWSKDVISGNTLANIEQKQAAQRFLDDLESDKWDFKHHQFDFVIGLIEG CCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC TIVHVQGENKEGKSFKDTPMYLQPWQKFVCVNLFGFFEKGTNIRRFNEALIFLPRKQGKT EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCE AFAASLTWAKNIVDRASGSKTYIVANSLKQTQESFGFLTYNVEKIRNDVKKMRIRDNNQE EHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCC HSVHVDFGDGYCDIFAIANQDDKLDSLNGNALILDEIHSWKKAGAKKYILMKNSQKAYRN CEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCHHHHHH KLLMGISTAGDIANGFLAQRVTTLKKVLSGTIKDKAYDSYFIFLCTAEQDEKGNIINPVT HEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCH REITTIDDPEVLASVTPSLDVTVTLDDLITEARQALLEPQLKAEFLNKSLNIFTNSMDAY HHHCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHCCCHHEEECCCCCE FDIDEFRFSNKQHSWTMEELSKLPITWYGGADLSKMHDLTASALYGNYEYKGKSIDIVIT EEHHHHHCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEE HAFFPKSRAIEKAQEDDIPLFEWQEEGWATLSNTETVLYDDIVKWFMEMRDKGFKIKSVH EEECCCHHHHHHHCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE FDKKFGREFFMMMKKQKFKMVDAPQQFWKKSEGFRRIEFKAKNKELYYVNNMAYEYCVAN CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCEEEEECCCHHHHHHHH VKAIEKTDDAIQFEKVMPNQRIDLFDASVFASRGMLEEKEQKSKKDAWGIGN HHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MVEVDNFETAIQWSKDVISGNTLANIEQKQAAQRFLDDLESDKWDFKHHQFDFVIGLIEG CCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEEECC TIVHVQGENKEGKSFKDTPMYLQPWQKFVCVNLFGFFEKGTNIRRFNEALIFLPRKQGKT EEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCEEEEEECCCCCE AFAASLTWAKNIVDRASGSKTYIVANSLKQTQESFGFLTYNVEKIRNDVKKMRIRDNNQE EHHHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHCCEEEEEHHHHHHHHHHHHHCCCCCC HSVHVDFGDGYCDIFAIANQDDKLDSLNGNALILDEIHSWKKAGAKKYILMKNSQKAYRN CEEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEHHHHHHHHCCCCEEEEEECCHHHHHH KLLMGISTAGDIANGFLAQRVTTLKKVLSGTIKDKAYDSYFIFLCTAEQDEKGNIINPVT HEEEEECCCCHHHHHHHHHHHHHHHHHHCCHHCCCCCCCEEEEEEECCCCCCCCCCCCCH REITTIDDPEVLASVTPSLDVTVTLDDLITEARQALLEPQLKAEFLNKSLNIFTNSMDAY HHHCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHHCHHHHHHHHCCCHHEEECCCCCE FDIDEFRFSNKQHSWTMEELSKLPITWYGGADLSKMHDLTASALYGNYEYKGKSIDIVIT EEHHHHHCCCCCCCCCHHHHHCCCEEEECCCCHHHHHHHHHHHHCCCEEECCCEEEEEEE HAFFPKSRAIEKAQEDDIPLFEWQEEGWATLSNTETVLYDDIVKWFMEMRDKGFKIKSVH EEECCCHHHHHHHCCCCCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEE FDKKFGREFFMMMKKQKFKMVDAPQQFWKKSEGFRRIEFKAKNKELYYVNNMAYEYCVAN CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCEEEEEEECCCEEEEECCCHHHHHHHH VKAIEKTDDAIQFEKVMPNQRIDLFDASVFASRGMLEEKEQKSKKDAWGIGN HHHHHCCCHHHHHHHHCCCCCEEHHHHHHHHHCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA