Definition Lactococcus lactis subsp. lactis Il1403, complete genome.
Accession NC_002662
Length 2,365,589

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The map label for this gene is ykbE

Identifier: 15672970

GI number: 15672970

Start: 1018394

End: 1018945

Strand: Direct

Name: ykbE

Synonym: L18129

Alternate gene names: NA

Gene position: 1018394-1018945 (Clockwise)

Preceding gene: 15672969

Following gene: 15672971

Centisome position: 43.05

GC content: 34.6

Gene sequence:

>552_bases
ATGGTTCAAGAGCCTATGGAAAAAGTAAAAAAGAAGCGTAAAGTTCTAATTATTACGTTTAGCGTTTGTTTCACCGTGAA
TTTATCCTTGGTTGTGCTATTCCAAGGATGGGTGAATCTTGGAAAATATTCTGTTTATTATGCCCAGCATTTGCCTCATA
AGGTAGGGACGAACCGTGTGATGGTTGCGGTATTTAATAATCTGGATGCCATATACATTCCGAATGCTAACTACAATGTT
CCATTTGGAGGAGTGCGAGTGAAAACTAGCGAGGGGGATATTGAATATCGCTTTGAAGGATTAAAAATTAATGATATTTC
GGTTTTCAAGAAAGGAGAATTATCTTTTAGTTTAAAACCTGAGGCAGGTGGTCTCGATTTAATTGACTTTGTAACTCCAT
ATACATACAATTTTAATTCAAAGGGTGAATTTATTTCTGTGACTTATTCTGAAGAAACGACACCTAAGACAATAAAACCT
ACGCTACAATATATCATCATTGTTAAAGAAAAATTGAATGAAATGTACGGTTTTATTGTTTCTCATCGGTAA

Upstream 100 bases:

>100_bases
AATGAAATGTATGGCCCAATTATTTCTCATAGAAAAGTTCCAAAAATAAACCTTCAATTTATCTATAATTTTGTGAATGA
AGGCAAATTCAAATAGGAAA

Downstream 100 bases:

>100_bases
GCACCAAAAATAAATTTGCAGTGGATATATAATTTATTCAATTATTGGAGGTTTAATTCATGAATACAGTAAAAAAAGTT
GCTAAATCAGTTGGTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MVQEPMEKVKKKRKVLIITFSVCFTVNLSLVVLFQGWVNLGKYSVYYAQHLPHKVGTNRVMVAVFNNLDAIYIPNANYNV
PFGGVRVKTSEGDIEYRFEGLKINDISVFKKGELSFSLKPEAGGLDLIDFVTPYTYNFNSKGEFISVTYSEETTPKTIKP
TLQYIIIVKEKLNEMYGFIVSHR

Sequences:

>Translated_183_residues
MVQEPMEKVKKKRKVLIITFSVCFTVNLSLVVLFQGWVNLGKYSVYYAQHLPHKVGTNRVMVAVFNNLDAIYIPNANYNV
PFGGVRVKTSEGDIEYRFEGLKINDISVFKKGELSFSLKPEAGGLDLIDFVTPYTYNFNSKGEFISVTYSEETTPKTIKP
TLQYIIIVKEKLNEMYGFIVSHR
>Mature_183_residues
MVQEPMEKVKKKRKVLIITFSVCFTVNLSLVVLFQGWVNLGKYSVYYAQHLPHKVGTNRVMVAVFNNLDAIYIPNANYNV
PFGGVRVKTSEGDIEYRFEGLKINDISVFKKGELSFSLKPEAGGLDLIDFVTPYTYNFNSKGEFISVTYSEETTPKTIKP
TLQYIIIVKEKLNEMYGFIVSHR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20909; Mature: 20909

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQEPMEKVKKKRKVLIITFSVCFTVNLSLVVLFQGWVNLGKYSVYYAQHLPHKVGTNRV
CCCHHHHHHHHCCEEEEEEEEEEEECCCEEEEEEHHHHCCCCEEEEEEHHCCHHCCCCEE
MVAVFNNLDAIYIPNANYNVPFGGVRVKTSEGDIEYRFEGLKINDISVFKKGELSFSLKP
EEEEECCCCEEEECCCCCCCCCCCEEEEECCCCEEEEEECEEECCEEEEEECCEEEEECC
EAGGLDLIDFVTPYTYNFNSKGEFISVTYSEETTPKTIKPTLQYIIIVKEKLNEMYGFIV
CCCCEEEEHHCCCEEECCCCCCCEEEEEECCCCCCCEECCCEEEEEEEHHHHHHHHHEEE
SHR
ECC
>Mature Secondary Structure
MVQEPMEKVKKKRKVLIITFSVCFTVNLSLVVLFQGWVNLGKYSVYYAQHLPHKVGTNRV
CCCHHHHHHHHCCEEEEEEEEEEEECCCEEEEEEHHHHCCCCEEEEEEHHCCHHCCCCEE
MVAVFNNLDAIYIPNANYNVPFGGVRVKTSEGDIEYRFEGLKINDISVFKKGELSFSLKP
EEEEECCCCEEEECCCCCCCCCCCEEEEECCCCEEEEEECEEECCEEEEEECCEEEEECC
EAGGLDLIDFVTPYTYNFNSKGEFISVTYSEETTPKTIKPTLQYIIIVKEKLNEMYGFIV
CCCCEEEEHHCCCEEECCCCCCCEEEEEECCCCCCCEECCCEEEEEEEHHHHHHHHHEEE
SHR
ECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA