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The map label for this gene is yjjD

Identifier: 15672948

GI number: 15672948

Start: 993341

End: 994963

Strand: Direct

Name: yjjD

Synonym: L193030

Alternate gene names: NA

Gene position: 993341-994963 (Clockwise)

Preceding gene: 15672947

Following gene: 15672949

Centisome position: 41.99

GC content: 35.43

Gene sequence:

>1623_bases
ATGAAACAACCACTTTATAATACAGGAGTTTTATTTAAGACTTTAATAAAAAGGGATTGGTTTAAGTTAGTTTTCTGGAT
TTTAGGAATGCTTGCTTTTGCTGCTTCAGGGGCAGGGAAAATGGAAGTTGCCTCGAATCCGGCGACGGCTAGTACTCTTT
ATACAATGTTTGTCAAAAATCCAGCAATGGTCGGATTATTTGGACCAACTCCAATAAATAATCCAACTAATTATAGTCTG
GGGCCGATTTTTGGTCAAACCATGACTTTAATTACGGGGCTGACTTTCGCTATCATTTCGATTATTTATGTTGTTAATCG
AAGCAGAAAAGAAGAAGATGATGGGATTACAGAACTTTTTCGGTCTTACTCTATTGGAAAATTGGCAAATACGACTGCTT
TAGTCATGGAACTTTTGCTCTTAAATTTAATAATGGCTGTCTTATTAGCTCTTTCAATAGAGGTCCAAAACGTGGCTGGC
TTGAATCATTTAGAAAGTAATTTTCTATTTGCTTTCACAACAAGCGCTCAGGGTTTCCTTTGGGGAATGTTTGCTTTACT
TTTCGGTCAAATTTTCTCTGAAGCAAGTACAACTAAAGGGATGACATTTGGTTTACTGGGTTTGTTATATATTGTTCGAA
TGCTAACAGATGTAACAAATCTTTCCATAGGTTGGTTCAATCCTCTGTCTTGGTCTTATCTAGCTTTTCCATATGTTAAA
GGTCATGAAAATTGGTTAGCTGTCTTTTTGACTTTTCTCTTAGCTTTTCTAATTTTAGGAATATCCTATATTCTAGAGCT
TAAAAGAGATGTGGGAGTGGGGTATTTTCCCGAAAGAAAGGCGCGACTTCATGGGAAAAAGGGACATTTCGGATTTCCTG
GTCTCGTTTTGAATCTTGAAAAAAAGATGATTATCGGTTGGCTTTTGGCAAGTTTTGTTCTGGGCTTAGTTTATGGTTCA
ATGTTTGGACAAATGGACCAATTTATTTCAAGTAATAAAACCGTTAAGGAGCTTTTTGTTGGGAATGAAACGGCAGCGAG
TGCGATTAGAGGAAACTTCATGGTCACTCTGTTTTCGATATTGTCAATCTTAATCGCAGCGTTTGGTGTAATTTTACTGA
CAAAAATGGTGAGCGAGGAAAGAAAAAATCGTCTGGAAGCTCTTTATGCTTTACCACTTTCACGACTAAAAGTGTATTCC
ACTTATTTACTGATAGCTATTCTGTCAGTAATTTTAGCTCAGTTTTTAGCGCTTTTTGGAATATTTATTGAACAGTTGGG
TAATAAAAATGCTTTGAGCTTCTTAGAAATTATGAAATCTGGCATGATTTGGCTTGTTGCTGTCATATTTGTTTTAGCAA
TACTTAGTCTGTTACTTGGGCTTGTGCCTCGTTTGGCAGAATTAATTTGGGTATATCTTGCTTTCTTACTTTTTATGACT
TATCTTGGAAAATTATTATCTTTGCCAAAATGGCTTGAAAATTTAAGCATTTATAACTATATTCCTAAATTGCCAGTTGA
GAAAATGAATCTTCCTACCGTTTTATTCATATTAATTTTATCTGTCTTCTTAGTTTTACTTGGCTTTGGAGCTTATAGAA
GACGCGATTTAATCACGGGGTAA

Upstream 100 bases:

>100_bases
ATTTTAAACACACTCTTACTTTATGGGGTAAAGAAGCTGGAAGCCACACCACCAACACTTGAAGATCTGTTTATGCGACA
TTATCAATAGGGGGCTTACT

Downstream 100 bases:

>100_bases
AATAAATAAAAAAGCTATCATAATTGATAGCTTTTTTTTTATGAAAATTGATATTTTATAGATTACTTTCAAAAGTGTAA
GAATAGTACTTTCTAAGTAT

Product: ABC transporter permease protein

Products: NA

Alternate protein names: Exporter Of Polyketide Antibiotics; Anibiotic ABC Transporter Efflux Pump; ABC Transporter Membrane-Spanning Protein; ABC Transporter Membrane Protein; ABC Transporter; ABC Transporter Permease Protein; ABC Transporter Permease; Tetronasin Resistance Transmembrane Protein; Exporter Of Polyketide Antibiotics- Like Protein; Abc Transporter Integral Membrane Subunit; ABC-2 Type Transport System Permease Protein; ABC Transporter Transmembrane Subunit; ABC Antibiotics Transporter; ABC Transporter Polyketide Tetronasin Permease; ABC Type Transport System Permease Protein; Tetronasin-Transport Membrane Protein ABC Transporter; TnrB3 Protein; Polyketide Antibiotics Exporter; Amino Acid Permease

Number of amino acids: Translated: 540; Mature: 540

Protein sequence:

>540_residues
MKQPLYNTGVLFKTLIKRDWFKLVFWILGMLAFAASGAGKMEVASNPATASTLYTMFVKNPAMVGLFGPTPINNPTNYSL
GPIFGQTMTLITGLTFAIISIIYVVNRSRKEEDDGITELFRSYSIGKLANTTALVMELLLLNLIMAVLLALSIEVQNVAG
LNHLESNFLFAFTTSAQGFLWGMFALLFGQIFSEASTTKGMTFGLLGLLYIVRMLTDVTNLSIGWFNPLSWSYLAFPYVK
GHENWLAVFLTFLLAFLILGISYILELKRDVGVGYFPERKARLHGKKGHFGFPGLVLNLEKKMIIGWLLASFVLGLVYGS
MFGQMDQFISSNKTVKELFVGNETAASAIRGNFMVTLFSILSILIAAFGVILLTKMVSEERKNRLEALYALPLSRLKVYS
TYLLIAILSVILAQFLALFGIFIEQLGNKNALSFLEIMKSGMIWLVAVIFVLAILSLLLGLVPRLAELIWVYLAFLLFMT
YLGKLLSLPKWLENLSIYNYIPKLPVEKMNLPTVLFILILSVFLVLLGFGAYRRRDLITG

Sequences:

>Translated_540_residues
MKQPLYNTGVLFKTLIKRDWFKLVFWILGMLAFAASGAGKMEVASNPATASTLYTMFVKNPAMVGLFGPTPINNPTNYSL
GPIFGQTMTLITGLTFAIISIIYVVNRSRKEEDDGITELFRSYSIGKLANTTALVMELLLLNLIMAVLLALSIEVQNVAG
LNHLESNFLFAFTTSAQGFLWGMFALLFGQIFSEASTTKGMTFGLLGLLYIVRMLTDVTNLSIGWFNPLSWSYLAFPYVK
GHENWLAVFLTFLLAFLILGISYILELKRDVGVGYFPERKARLHGKKGHFGFPGLVLNLEKKMIIGWLLASFVLGLVYGS
MFGQMDQFISSNKTVKELFVGNETAASAIRGNFMVTLFSILSILIAAFGVILLTKMVSEERKNRLEALYALPLSRLKVYS
TYLLIAILSVILAQFLALFGIFIEQLGNKNALSFLEIMKSGMIWLVAVIFVLAILSLLLGLVPRLAELIWVYLAFLLFMT
YLGKLLSLPKWLENLSIYNYIPKLPVEKMNLPTVLFILILSVFLVLLGFGAYRRRDLITG
>Mature_540_residues
MKQPLYNTGVLFKTLIKRDWFKLVFWILGMLAFAASGAGKMEVASNPATASTLYTMFVKNPAMVGLFGPTPINNPTNYSL
GPIFGQTMTLITGLTFAIISIIYVVNRSRKEEDDGITELFRSYSIGKLANTTALVMELLLLNLIMAVLLALSIEVQNVAG
LNHLESNFLFAFTTSAQGFLWGMFALLFGQIFSEASTTKGMTFGLLGLLYIVRMLTDVTNLSIGWFNPLSWSYLAFPYVK
GHENWLAVFLTFLLAFLILGISYILELKRDVGVGYFPERKARLHGKKGHFGFPGLVLNLEKKMIIGWLLASFVLGLVYGS
MFGQMDQFISSNKTVKELFVGNETAASAIRGNFMVTLFSILSILIAAFGVILLTKMVSEERKNRLEALYALPLSRLKVYS
TYLLIAILSVILAQFLALFGIFIEQLGNKNALSFLEIMKSGMIWLVAVIFVLAILSLLLGLVPRLAELIWVYLAFLLFMT
YLGKLLSLPKWLENLSIYNYIPKLPVEKMNLPTVLFILILSVFLVLLGFGAYRRRDLITG

Specific function: Unknown

COG id: COG3559

COG function: function code M; Putative exporter of polyketide antibiotics

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60284; Mature: 60284

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQPLYNTGVLFKTLIKRDWFKLVFWILGMLAFAASGAGKMEVASNPATASTLYTMFVKN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCC
PAMVGLFGPTPINNPTNYSLGPIFGQTMTLITGLTFAIISIIYVVNRSRKEEDDGITELF
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RSYSIGKLANTTALVMELLLLNLIMAVLLALSIEVQNVAGLNHLESNFLFAFTTSAQGFL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCHHH
WGMFALLFGQIFSEASTTKGMTFGLLGLLYIVRMLTDVTNLSIGWFNPLSWSYLAFPYVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
GHENWLAVFLTFLLAFLILGISYILELKRDVGVGYFPERKARLHGKKGHFGFPGLVLNLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEHH
KKMIIGWLLASFVLGLVYGSMFGQMDQFISSNKTVKELFVGNETAASAIRGNFMVTLFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSILIAAFGVILLTKMVSEERKNRLEALYALPLSRLKVYSTYLLIAILSVILAQFLALFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFIEQLGNKNALSFLEIMKSGMIWLVAVIFVLAILSLLLGLVPRLAELIWVYLAFLLFMT
HHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGKLLSLPKWLENLSIYNYIPKLPVEKMNLPTVLFILILSVFLVLLGFGAYRRRDLITG
HHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCC
>Mature Secondary Structure
MKQPLYNTGVLFKTLIKRDWFKLVFWILGMLAFAASGAGKMEVASNPATASTLYTMFVKN
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHCC
PAMVGLFGPTPINNPTNYSLGPIFGQTMTLITGLTFAIISIIYVVNRSRKEEDDGITELF
CCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH
RSYSIGKLANTTALVMELLLLNLIMAVLLALSIEVQNVAGLNHLESNFLFAFTTSAQGFL
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEEEECCCCHHH
WGMFALLFGQIFSEASTTKGMTFGLLGLLYIVRMLTDVTNLSIGWFNPLSWSYLAFPYVK
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCC
GHENWLAVFLTFLLAFLILGISYILELKRDVGVGYFPERKARLHGKKGHFGFPGLVLNLE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCCCCCCEEEHH
KKMIIGWLLASFVLGLVYGSMFGQMDQFISSNKTVKELFVGNETAASAIRGNFMVTLFSI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH
LSILIAAFGVILLTKMVSEERKNRLEALYALPLSRLKVYSTYLLIAILSVILAQFLALFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFIEQLGNKNALSFLEIMKSGMIWLVAVIFVLAILSLLLGLVPRLAELIWVYLAFLLFMT
HHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YLGKLLSLPKWLENLSIYNYIPKLPVEKMNLPTVLFILILSVFLVLLGFGAYRRRDLITG
HHHHHHHHHHHHHHCHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA