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The map label for this gene is yjjA

Identifier: 15672945

GI number: 15672945

Start: 990778

End: 991695

Strand: Direct

Name: yjjA

Synonym: L190464

Alternate gene names: 15672945

Gene position: 990778-991695 (Clockwise)

Preceding gene: 15672944

Following gene: 15672947

Centisome position: 41.88

GC content: 34.2

Gene sequence:

>918_bases
ATGAGTTTCACAAGTGATGTAAAAAAAGAATTAACAAGTAATTTAGCAACAACTGGAGCACTTTTGGCACTTGTCAGAAT
GAATGGCTCTGTGGGTATTTTTAATGGATTAACTTTATCGATTACGACTGAAAATGCTGGAACTGCTAAATATATTTATC
AAATGTTAAGAGAACTCTACGATGTTCATGCTGAAATTCGTGTTCATCAAAAGACTACGCTCTCTAAAAATCGGGTTTAT
ACGGTTTTTATAACTGAGGGTGCGAGTGAATTATTAGATGAATTAAGTTTAGCAGATTCGTTGATGTTGGATAATGGTGT
GCCAGAATTTGTTAAAAATGATGAATTTATCAAAAAGGACTATTTACGAGGTGCTTTTTTATCGGCAGGCTCTCTCCATA
ATCCTGAAAAAGGTGAGTATCAGTTATCAATTGCTAGTGTATATCAGGAACATGCGGAAGATTTACAAGAAATTTTTCGA
GATTTTGGTTTAAATGCGCGCGTTATTGAAAGGAAAAATCGCTGGATACTCTATTTATCAAAAGCTGAAGAAATAATGGA
TTTCTTGACTTTAATTGGAGCGATGAAAGCAAGATTGAAATTTGAAGAGGCGAAGATTATGCGTGAAATGCGTGGTTTAG
CTAATCGGCAGTCCAATTTTGAAAATGCTAATATTGCTAAATCAGTTATGGCGGCTCAAGAAGCAATTAATGCTATTAAA
TTTCTTAATGAGAGAAAAGAATTAGAACAACTTCCAGAGAATTTAAAGGAAATTGCTCGTGTACGTCTAGAAAATCCTGA
AGCAACAATTAAAGAGTTGGGAGAGTTGCTTGAACCCTCTTTAGGGAAATCTGGAGTAAATCACCGACTTAGAAAACTTG
TTGAACAAGCTAATGAGTTAAGAAAAATTGAGAATTAA

Upstream 100 bases:

>100_bases
AATTTACTGACAGAATGTTTGTCAGTAAATTTTTATAAGAAAAAAGTCTGACAGAAAGAATAGAGCAGGAAAAAATATCC
TGTCCTGTATAGAAAGAATT

Downstream 100 bases:

>100_bases
AAAAACTAGCTAGATATTCTTGCTAGTTTTTTTATACTTTGTCTTATTTCCACCCATTGAGGAAAAAACGAGAAACGATT
TCAGCTTTTTCTATAAGTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSFTSDVKKELTSNLATTGALLALVRMNGSVGIFNGLTLSITTENAGTAKYIYQMLRELYDVHAEIRVHQKTTLSKNRVY
TVFITEGASELLDELSLADSLMLDNGVPEFVKNDEFIKKDYLRGAFLSAGSLHNPEKGEYQLSIASVYQEHAEDLQEIFR
DFGLNARVIERKNRWILYLSKAEEIMDFLTLIGAMKARLKFEEAKIMREMRGLANRQSNFENANIAKSVMAAQEAINAIK
FLNERKELEQLPENLKEIARVRLENPEATIKELGELLEPSLGKSGVNHRLRKLVEQANELRKIEN

Sequences:

>Translated_305_residues
MSFTSDVKKELTSNLATTGALLALVRMNGSVGIFNGLTLSITTENAGTAKYIYQMLRELYDVHAEIRVHQKTTLSKNRVY
TVFITEGASELLDELSLADSLMLDNGVPEFVKNDEFIKKDYLRGAFLSAGSLHNPEKGEYQLSIASVYQEHAEDLQEIFR
DFGLNARVIERKNRWILYLSKAEEIMDFLTLIGAMKARLKFEEAKIMREMRGLANRQSNFENANIAKSVMAAQEAINAIK
FLNERKELEQLPENLKEIARVRLENPEATIKELGELLEPSLGKSGVNHRLRKLVEQANELRKIEN
>Mature_304_residues
SFTSDVKKELTSNLATTGALLALVRMNGSVGIFNGLTLSITTENAGTAKYIYQMLRELYDVHAEIRVHQKTTLSKNRVYT
VFITEGASELLDELSLADSLMLDNGVPEFVKNDEFIKKDYLRGAFLSAGSLHNPEKGEYQLSIASVYQEHAEDLQEIFRD
FGLNARVIERKNRWILYLSKAEEIMDFLTLIGAMKARLKFEEAKIMREMRGLANRQSNFENANIAKSVMAAQEAINAIKF
LNERKELEQLPENLKEIARVRLENPEATIKELGELLEPSLGKSGVNHRLRKLVEQANELRKIEN

Specific function: May be required for sporulation

COG id: COG1481

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the whiA transcriptional regulatory family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): WHIA_LACLA (Q9CGX9)

Other databases:

- EMBL:   AE005176
- PIR:   C86745
- RefSeq:   NP_267119.1
- ProteinModelPortal:   Q9CGX9
- GeneID:   1114594
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L190464
- NMPDR:   fig|272623.1.peg.986
- HOGENOM:   HBG485718
- OMA:   DSFFGIE
- ProtClustDB:   CLSK697522
- BioCyc:   LLAC272623:L190464-MONOMER
- GO:   GO:0006350
- HAMAP:   MF_01420
- InterPro:   IPR004042
- InterPro:   IPR003802
- InterPro:   IPR023054
- InterPro:   IPR018478
- TIGRFAMs:   TIGR00647

Pfam domain/function: PF02650 HTH_WhiA; PF10298 WhiA_N

EC number: NA

Molecular weight: Translated: 34613; Mature: 34482

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: PS50819 INTEIN_ENDONUCLEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFTSDVKKELTSNLATTGALLALVRMNGSVGIFNGLTLSITTENAGTAKYIYQMLRELY
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHH
DVHAEIRVHQKTTLSKNRVYTVFITEGASELLDELSLADSLMLDNGVPEFVKNDEFIKKD
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
YLRGAFLSAGSLHNPEKGEYQLSIASVYQEHAEDLQEIFRDFGLNARVIERKNRWILYLS
HHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC
KAEEIMDFLTLIGAMKARLKFEEAKIMREMRGLANRQSNFENANIAKSVMAAQEAINAIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FLNERKELEQLPENLKEIARVRLENPEATIKELGELLEPSLGKSGVNHRLRKLVEQANEL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RKIEN
HHCCC
>Mature Secondary Structure 
SFTSDVKKELTSNLATTGALLALVRMNGSVGIFNGLTLSITTENAGTAKYIYQMLRELY
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCHHHHHHHHHHHHH
DVHAEIRVHQKTTLSKNRVYTVFITEGASELLDELSLADSLMLDNGVPEFVKNDEFIKKD
HHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCHHHHCCCHHHHHH
YLRGAFLSAGSLHNPEKGEYQLSIASVYQEHAEDLQEIFRDFGLNARVIERKNRWILYLS
HHHHHHHCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEC
KAEEIMDFLTLIGAMKARLKFEEAKIMREMRGLANRQSNFENANIAKSVMAAQEAINAIK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
FLNERKELEQLPENLKEIARVRLENPEATIKELGELLEPSLGKSGVNHRLRKLVEQANEL
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
RKIEN
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471