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The map label for this gene is deoD

Identifier: 15672913

GI number: 15672913

Start: 956820

End: 957524

Strand: Direct

Name: deoD

Synonym: L156559

Alternate gene names: 15672913

Gene position: 956820-957524 (Clockwise)

Preceding gene: 15672912

Following gene: 15672914

Centisome position: 40.45

GC content: 38.44

Gene sequence:

>705_bases
ATGCCAACACCACATATCGAAGCTCAAAAAGGCGAAATCGCAGATAAAATTCTCTTACCAGGAGATCCACTTCGCGCAAA
ATTTATCGCAGAAAACTTCCTTGAAGATGCTGTGCAATTTAACCAAGTTCGCGGAATGCTTGGCTTTACTGGAACTTACA
AGGGCCATCGTGTTTCTGTTATGGGAACAGGAATGGGAATTCCTTCAATCTCAATCTATGCTAATGAATTAATTACAGAA
TACGGTGTAAAAAGATTAATTCGTGTTGGGACTGCTGGTTCTGTAAATGAAGATGTTCATATTCGTGACCTTGTCATTGG
GCAAGCAGCTGCGACAACTTCAGCGATTATTCGTAATGATTTCCCTGATTTTGATTTCCCCCAAATTGCTGATTTTGATT
TGCTTGATAAAGCTTATCATATTGCAAAAGACCTTGGAATTACAACTCACGTTGGAAATATTCTCAGCTCTGATTTGTTC
TACGGTGGACCAGATGCAGTTAAAGTTGGAAAACTTGGTGTGAAGGCTGTTGAAATGGAAGCTGCTGGCCTTTATTATCT
TGGGGCAAAATATAAAGTTCAAACTTTGGGAATTATGACAATTTCTGACCATATTTTGACTGGAGAATCAACAACTTCTG
AAGAGCGTCAATTGACTTTCACAGATATGATGAAAGTTGGATTGGAAACTTTGATTTCTGAATAA

Upstream 100 bases:

>100_bases
CTCAAAGGTTTGAAACGCTGGAAAAATTAAGTTCTTAACTTACTGATGGAAACTCTGTCAGTAAATTTGATAATTATATT
AAAAGAAAAGGAAATTAAAA

Downstream 100 bases:

>100_bases
TTAGTTAAAGTTCTGTCCGCAAATTGTAAAATGAAGTTAGCCACCTTGAGTCAAGCAAAAAACATCTGAATCTCTTATAC
TAGAAGTTCGACCAAATAGT

Product: purine nucleoside phosphorylase

Products: NA

Alternate protein names: PNP

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MPTPHIEAQKGEIADKILLPGDPLRAKFIAENFLEDAVQFNQVRGMLGFTGTYKGHRVSVMGTGMGIPSISIYANELITE
YGVKRLIRVGTAGSVNEDVHIRDLVIGQAAATTSAIIRNDFPDFDFPQIADFDLLDKAYHIAKDLGITTHVGNILSSDLF
YGGPDAVKVGKLGVKAVEMEAAGLYYLGAKYKVQTLGIMTISDHILTGESTTSEERQLTFTDMMKVGLETLISE

Sequences:

>Translated_234_residues
MPTPHIEAQKGEIADKILLPGDPLRAKFIAENFLEDAVQFNQVRGMLGFTGTYKGHRVSVMGTGMGIPSISIYANELITE
YGVKRLIRVGTAGSVNEDVHIRDLVIGQAAATTSAIIRNDFPDFDFPQIADFDLLDKAYHIAKDLGITTHVGNILSSDLF
YGGPDAVKVGKLGVKAVEMEAAGLYYLGAKYKVQTLGIMTISDHILTGESTTSEERQLTFTDMMKVGLETLISE
>Mature_233_residues
PTPHIEAQKGEIADKILLPGDPLRAKFIAENFLEDAVQFNQVRGMLGFTGTYKGHRVSVMGTGMGIPSISIYANELITEY
GVKRLIRVGTAGSVNEDVHIRDLVIGQAAATTSAIIRNDFPDFDFPQIADFDLLDKAYHIAKDLGITTHVGNILSSDLFY
GGPDAVKVGKLGVKAVEMEAAGLYYLGAKYKVQTLGIMTISDHILTGESTTSEERQLTFTDMMKVGLETLISE

Specific function: Cleavage Of Guanosine Or Inosine To Respective Bases And Sugar-1-Phosphate Molecules. [C]

COG id: COG0813

COG function: function code F; Purine-nucleoside phosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PNP/UDP phosphorylase family

Homologues:

Organism=Escherichia coli, GI1790844, Length=235, Percent_Identity=56.5957446808511, Blast_Score=265, Evalue=2e-72,
Organism=Escherichia coli, GI1790265, Length=153, Percent_Identity=33.3333333333333, Blast_Score=85, Evalue=4e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DEOD_LACLA (Q9CH10)

Other databases:

- EMBL:   AE005176
- PIR:   C86741
- RefSeq:   NP_267087.1
- ProteinModelPortal:   Q9CH10
- SMR:   Q9CH10
- GeneID:   1114561
- GenomeReviews:   AE005176_GR
- KEGG:   lla:L156559
- NMPDR:   fig|272623.1.peg.953
- HOGENOM:   HBG617197
- OMA:   SFETHAF
- ProtClustDB:   PRK05819
- BioCyc:   LLAC272623:L156559-MONOMER
- BRENDA:   2.4.2.1
- HAMAP:   MF_01627
- InterPro:   IPR004402
- InterPro:   IPR018017
- InterPro:   IPR018016
- InterPro:   IPR000845
- PANTHER:   PTHR21234
- TIGRFAMs:   TIGR00107

Pfam domain/function: PF01048 PNP_UDP_1

EC number: =2.4.2.1

Molecular weight: Translated: 25428; Mature: 25296

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS01232 PNP_UDP_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTPHIEAQKGEIADKILLPGDPLRAKFIAENFLEDAVQFNQVRGMLGFTGTYKGHRVSV
CCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGTGMGIPSISIYANELITEYGVKRLIRVGTAGSVNEDVHIRDLVIGQAAATTSAIIRND
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCHHHHHHHHHHCC
FPDFDFPQIADFDLLDKAYHIAKDLGITTHVGNILSSDLFYGGPDAVKVGKLGVKAVEME
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEE
AAGLYYLGAKYKVQTLGIMTISDHILTGESTTSEERQLTFTDMMKVGLETLISE
CCCEEEECCCEEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PTPHIEAQKGEIADKILLPGDPLRAKFIAENFLEDAVQFNQVRGMLGFTGTYKGHRVSV
CCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEE
MGTGMGIPSISIYANELITEYGVKRLIRVGTAGSVNEDVHIRDLVIGQAAATTSAIIRND
EECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEHEEECCHHHHHHHHHHCC
FPDFDFPQIADFDLLDKAYHIAKDLGITTHVGNILSSDLFYGGPDAVKVGKLGVKAVEME
CCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEE
AAGLYYLGAKYKVQTLGIMTISDHILTGESTTSEERQLTFTDMMKVGLETLISE
CCCEEEECCCEEEEEEEEEEECCEEECCCCCCCCHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471