| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is tagH
Identifier: 15672897
GI number: 15672897
Start: 937689
End: 939089
Strand: Direct
Name: tagH
Synonym: L137446
Alternate gene names: 15672897
Gene position: 937689-939089 (Clockwise)
Preceding gene: 15672896
Following gene: 15672898
Centisome position: 39.64
GC content: 33.62
Gene sequence:
>1401_bases ATGAACACCAATAAAGTAAAGATAAAAGCTGAATATCTAACTAAAAAATTTGAATTGCTTCCAGCAAAAAGTAGTAAAAA TAAAGCCAAATCATTAATAGGATCTAATAGTAAAAACGAAAAAGACTTCTGGGCTTTAAGAAATATAAGTTTTGAGATTC GAGATGGTGAGTGTGTAGGAGTAATTGGATTAAATGGTGCAGGGAAATCTACACTTTCCAATATCATTAGTGGTCAAATT GCTCAGACTACTGGACGGGTGGAAATAAATGGTGATGTATCTATTATTGCAGCTAGTGCAGGGATGCAAAATAACCTTTC TGGTCGTGAAAATATTCGTCTTAAGGCGTTGATGGTTGGGCTGACTAATAAAGAAATTAAGTCAAAAATGGATGACATCA TCGAATTTTCAGAACTAGGACCATTCATTGATCAACCTGTGAAAACATACTCATCAGGGATGAAAGCTAAGTTAGGCTTT TCCATTATGGTTCACCAAAATCCAGATATTATGATTATAGATGAAGGGTTATCTGTTGGAGATAAAACCTTTGTAGATAA ATCTCAAAAGAAAATGTTTGAATTTCGAGATGAAGGAAAAACAATTCTTCTCGTATCTCACGATATGCGCACAATAAAAG AATGGTGTGATCGAGTAATTTGGTTAAATTATGGGGAAGTTAAGGCTTACGGAAGACCAGAAGAAGTCATTCCTGAATAT GAAAAATTTGTTCAATGGTTCAAAAAACTTCCTAAAAAAGAACAAGAAAAATTTAAAACTGATCAAAGGCAAGCACAACT TGATTATTCTGTTGAAGAGTTAAAAGCGGAGATTGTGAGCCAAAATCCTTCTAAAAGTAGAAGAGTTCAAAGAGAAGTAA CAGAAGAATTAAAAAATAAGAAAGACAATCATAAATTATCACTTATGTCTAAAGTTATTGTTTGGCTTTGCCTTCTTGCA TTTATATGGATTACCCTTGTTTCTTTAAGCAATGCAACTTTGGCAGAGTCTTTGAGACATCCTAAAACATTTTTTACTGA ACGTCTTTTCAAATCAGATACCAGAAATATGACTTCAACAACAAAAAAAGAAGCTGTAGTTAAAACTTCTTCAAGTCCAA AGAAAAAAGTATCTCAAGCTAAAAAGACTACAAAAGTTTCATCTACTCAGAAGAATACGAGTTCATCAAGCTCAACATCA AATCAAAATACGTATATCGTCCAAGCGGGAGATTCATTAAGTATTATTGCCGAAAATCATGGGTATTCTGTTGAGGAAAT TCAACAAGTAAATCCAGGAGTAGACTTTAGCGTCATTCATCCAGGACAAGAAATAAATCTACCAGAACCAACAACAAGCG CAAACTCAACAACAGAACAATCAGACGGGGCCAATCAATAA
Upstream 100 bases:
>100_bases AAGAGCTCGAACAAATTTCAAAAATAGAATCACTAGAAAGAAAAATAGATTTACTTGTCAATAAAATAGAAACCTTAGAA GGAAATAATAGAAAAAATAA
Downstream 100 bases:
>100_bases TGAAAGATGCGATTCTTTACATCAAAGAACAAATTAAATATTTCCGAATAGCAGTCAATCTATCAAAATATAGTACAAAG AGTACCTCAATGCAAAACCG
Product: teichoic acid ABC transporter ATP binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 466; Mature: 466
Protein sequence:
>466_residues MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFWALRNISFEIRDGECVGVIGLNGAGKSTLSNIISGQI AQTTGRVEINGDVSIIAASAGMQNNLSGRENIRLKALMVGLTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGF SIMVHQNPDIMIIDEGLSVGDKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDRVIWLNYGEVKAYGRPEEVIPEY EKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKAEIVSQNPSKSRRVQREVTEELKNKKDNHKLSLMSKVIVWLCLLA FIWITLVSLSNATLAESLRHPKTFFTERLFKSDTRNMTSTTKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKNTSSSSSTS NQNTYIVQAGDSLSIIAENHGYSVEEIQQVNPGVDFSVIHPGQEINLPEPTTSANSTTEQSDGANQ
Sequences:
>Translated_466_residues MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFWALRNISFEIRDGECVGVIGLNGAGKSTLSNIISGQI AQTTGRVEINGDVSIIAASAGMQNNLSGRENIRLKALMVGLTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGF SIMVHQNPDIMIIDEGLSVGDKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDRVIWLNYGEVKAYGRPEEVIPEY EKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKAEIVSQNPSKSRRVQREVTEELKNKKDNHKLSLMSKVIVWLCLLA FIWITLVSLSNATLAESLRHPKTFFTERLFKSDTRNMTSTTKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKNTSSSSSTS NQNTYIVQAGDSLSIIAENHGYSVEEIQQVNPGVDFSVIHPGQEINLPEPTTSANSTTEQSDGANQ >Mature_466_residues MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFWALRNISFEIRDGECVGVIGLNGAGKSTLSNIISGQI AQTTGRVEINGDVSIIAASAGMQNNLSGRENIRLKALMVGLTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGF SIMVHQNPDIMIIDEGLSVGDKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDRVIWLNYGEVKAYGRPEEVIPEY EKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKAEIVSQNPSKSRRVQREVTEELKNKKDNHKLSLMSKVIVWLCLLA FIWITLVSLSNATLAESLRHPKTFFTERLFKSDTRNMTSTTKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKNTSSSSSTS NQNTYIVQAGDSLSIIAENHGYSVEEIQQVNPGVDFSVIHPGQEINLPEPTTSANSTTEQSDGANQ
Specific function: Part of the ABC transporter complex TagGH involved in teichoic acids export. Responsible for energy coupling to the transport system
COG id: COG1134
COG function: function code GM; ABC-type polysaccharide/polyol phosphate transport system, ATPase component
Gene ontology:
Cell location: Cell membrane; Peripheral membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 LysM repeat
Homologues:
Organism=Homo sapiens, GI31657092, Length=223, Percent_Identity=30.9417040358744, Blast_Score=96, Evalue=8e-20, Organism=Homo sapiens, GI6005701, Length=257, Percent_Identity=27.2373540856031, Blast_Score=93, Evalue=5e-19, Organism=Homo sapiens, GI27477115, Length=200, Percent_Identity=29, Blast_Score=89, Evalue=8e-18, Organism=Homo sapiens, GI116734710, Length=213, Percent_Identity=25.8215962441315, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI153792144, Length=206, Percent_Identity=29.126213592233, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI27436953, Length=198, Percent_Identity=28.2828282828283, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI27262624, Length=292, Percent_Identity=25.6849315068493, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI27262626, Length=292, Percent_Identity=25.6849315068493, Blast_Score=82, Evalue=8e-16, Organism=Homo sapiens, GI105990541, Length=204, Percent_Identity=27.4509803921569, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI30795238, Length=214, Percent_Identity=26.1682242990654, Blast_Score=79, Evalue=7e-15, Organism=Homo sapiens, GI27881501, Length=214, Percent_Identity=26.1682242990654, Blast_Score=79, Evalue=1e-14, Organism=Homo sapiens, GI47078218, Length=199, Percent_Identity=25.6281407035176, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI45446740, Length=199, Percent_Identity=25.6281407035176, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI150417984, Length=207, Percent_Identity=25.1207729468599, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI89111135, Length=252, Percent_Identity=26.1904761904762, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI21536376, Length=203, Percent_Identity=26.1083743842365, Blast_Score=70, Evalue=4e-12, Organism=Escherichia coli, GI48994943, Length=207, Percent_Identity=25.1207729468599, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786398, Length=249, Percent_Identity=27.710843373494, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI1789032, Length=252, Percent_Identity=23.015873015873, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI87081782, Length=217, Percent_Identity=24.8847926267281, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1790467, Length=220, Percent_Identity=25, Blast_Score=74, Evalue=2e-14, Organism=Escherichia coli, GI1788761, Length=207, Percent_Identity=27.0531400966184, Blast_Score=73, Evalue=4e-14, Organism=Escherichia coli, GI87081791, Length=230, Percent_Identity=21.7391304347826, Blast_Score=71, Evalue=1e-13, Organism=Escherichia coli, GI1790739, Length=219, Percent_Identity=25.1141552511416, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1788210, Length=220, Percent_Identity=30.9090909090909, Blast_Score=69, Evalue=5e-13, Organism=Escherichia coli, GI1789751, Length=249, Percent_Identity=23.2931726907631, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI87081709, Length=201, Percent_Identity=23.8805970149254, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1787547, Length=212, Percent_Identity=26.8867924528302, Blast_Score=69, Evalue=7e-13, Organism=Escherichia coli, GI1790190, Length=210, Percent_Identity=26.1904761904762, Blast_Score=68, Evalue=1e-12, Organism=Escherichia coli, GI1787029, Length=232, Percent_Identity=25, Blast_Score=66, Evalue=4e-12, Organism=Escherichia coli, GI1787105, Length=199, Percent_Identity=24.1206030150754, Blast_Score=62, Evalue=5e-11, Organism=Escherichia coli, GI1789672, Length=209, Percent_Identity=23.444976076555, Blast_Score=62, Evalue=6e-11, Organism=Escherichia coli, GI1787370, Length=212, Percent_Identity=23.1132075471698, Blast_Score=62, Evalue=7e-11, Organism=Escherichia coli, GI1786345, Length=225, Percent_Identity=23.5555555555556, Blast_Score=62, Evalue=8e-11, Organism=Caenorhabditis elegans, GI115533608, Length=261, Percent_Identity=24.1379310344828, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI17565586, Length=308, Percent_Identity=23.3766233766234, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71983523, Length=224, Percent_Identity=28.125, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983510, Length=224, Percent_Identity=28.125, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI71983516, Length=224, Percent_Identity=27.6785714285714, Blast_Score=83, Evalue=2e-16, Organism=Caenorhabditis elegans, GI17510237, Length=232, Percent_Identity=28.0172413793103, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17569081, Length=211, Percent_Identity=29.3838862559242, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI25146777, Length=227, Percent_Identity=24.6696035242291, Blast_Score=68, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71992070, Length=282, Percent_Identity=25.177304964539, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI71992066, Length=282, Percent_Identity=25.177304964539, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI86564969, Length=282, Percent_Identity=25.177304964539, Blast_Score=65, Evalue=6e-11, Organism=Caenorhabditis elegans, GI25146765, Length=282, Percent_Identity=25.177304964539, Blast_Score=65, Evalue=7e-11, Organism=Saccharomyces cerevisiae, GI6321720, Length=216, Percent_Identity=29.6296296296296, Blast_Score=68, Evalue=3e-12, Organism=Drosophila melanogaster, GI28573571, Length=243, Percent_Identity=26.7489711934156, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI28573573, Length=207, Percent_Identity=27.536231884058, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI221500365, Length=198, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI116007184, Length=198, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24643674, Length=218, Percent_Identity=26.1467889908257, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI221512771, Length=229, Percent_Identity=25.3275109170306, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI24666092, Length=240, Percent_Identity=25.4166666666667, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI45550390, Length=201, Percent_Identity=27.8606965174129, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI161077321, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24648314, Length=199, Percent_Identity=25.1256281407035, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): TAGH_LACLA (Q9CH26)
Other databases:
- EMBL: AE005176 - PIR: C86739 - RefSeq: NP_267071.1 - ProteinModelPortal: Q9CH26 - GeneID: 1114545 - GenomeReviews: AE005176_GR - KEGG: lla:L137446 - NMPDR: fig|272623.1.peg.937 - HOGENOM: HBG758042 - OMA: LGPFIDQ - ProtClustDB: CLSK697492 - BioCyc: LLAC272623:L137446-MONOMER - BRENDA: 3.6.3.40 - HAMAP: MF_01715 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR015860 - InterPro: IPR003593 - InterPro: IPR018392 - InterPro: IPR002482 - SMART: SM00382 - SMART: SM00257
Pfam domain/function: PF00005 ABC_tran; PF01476 LysM
EC number: =3.6.3.40
Molecular weight: Translated: 52210; Mature: 52210
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: PS00211 ABC_TRANSPORTER_1; PS50893 ABC_TRANSPORTER_2; PS51251 TAGH
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFWALRNISFEIRDGECVG CCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHEEEECCEEEEECCCEEE VIGLNGAGKSTLSNIISGQIAQTTGRVEINGDVSIIAASAGMQNNLSGRENIRLKALMVG EEEECCCCHHHHHHHHCCCHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEE LTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGFSIMVHQNPDIMIIDEGLSVG CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECEEEEEECCCCEEEEECCCCCC DKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDRVIWLNYGEVKAYGRPEEVIPEY CHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEECCCCEEECCCCHHHHHHH EKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKAEIVSQNPSKSRRVQREVTEELKNK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC KDNHKLSLMSKVIVWLCLLAFIWITLVSLSNATLAESLRHPKTFFTERLFKSDTRNMTST CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHH TKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKNTSSSSSTSNQNTYIVQAGDSLSIIAENH HHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCC GYSVEEIQQVNPGVDFSVIHPGQEINLPEPTTSANSTTEQSDGANQ CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNTNKVKIKAEYLTKKFELLPAKSSKNKAKSLIGSNSKNEKDFWALRNISFEIRDGECVG CCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCHHEEEECCEEEEECCCEEE VIGLNGAGKSTLSNIISGQIAQTTGRVEINGDVSIIAASAGMQNNLSGRENIRLKALMVG EEEECCCCHHHHHHHHCCCHHHCCCEEEECCCEEEEEECCCCCCCCCCCCCEEEEEEEEE LTNKEIKSKMDDIIEFSELGPFIDQPVKTYSSGMKAKLGFSIMVHQNPDIMIIDEGLSVG CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEECEEEEEECCCCEEEEECCCCCC DKTFVDKSQKKMFEFRDEGKTILLVSHDMRTIKEWCDRVIWLNYGEVKAYGRPEEVIPEY CHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHCCEEEECCCCEEECCCCHHHHHHH EKFVQWFKKLPKKEQEKFKTDQRQAQLDYSVEELKAEIVSQNPSKSRRVQREVTEELKNK HHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCC KDNHKLSLMSKVIVWLCLLAFIWITLVSLSNATLAESLRHPKTFFTERLFKSDTRNMTST CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHCCCCHHHH TKKEAVVKTSSSPKKKVSQAKKTTKVSSTQKNTSSSSSTSNQNTYIVQAGDSLSIIAENH HHHHHEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCC GYSVEEIQQVNPGVDFSVIHPGQEINLPEPTTSANSTTEQSDGANQ CCCHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11337471