Click here to switch to the map view.

The map label for this gene is rmaH

Identifier: 15672890

GI number: 15672890

Start: 932070

End: 932534

Strand: Direct

Name: rmaH

Synonym: L131803

Alternate gene names: NA

Gene position: 932070-932534 (Clockwise)

Preceding gene: 15672889

Following gene: 15672891

Centisome position: 39.4

GC content: 36.77

Gene sequence:

>465_bases
ATGGATTCCAATAAGGCAGCGGAGGTTTTCCTCACAACTGTTATCAAAAGAGGAAAAGCAGAGATGATGCACCGCTTTAA
TACCTACTCCCAAGGGGAGCATTTGGTATTGGGCTATCTTTATAAGGAAGCTGGTAAGCAAATTGTTCCAAGTAAGATTG
CAAAATTTACGCATACAAGTACTGCAAGAATTGCGACAATCTTGAATAATCTTGAGAGTAAAAATTTAGTTACCCGTGAG
ATTTCAAGAACAGACCGTCGAAAAATTTTAGTAGCCATTACTGATAAAGGACGTCATGTTGCGGAAGAAATTCGAGTAGA
AGCTTGCTCAAATTTAGCACGCGTTTTTGAAGAAATGGGTGAAGAACGAACAGAAAGTTTCATTGAAAATTTCAAATTAT
TTTTAGAAATTGGAATGAAGCTAGCTAAAGAAGACAAAGAAAAAGAGGAGGAAAAAAATGCCTGA

Upstream 100 bases:

>100_bases
AAAAAAATAAAAACTAAAAATTTTTATTCTTGACAAAAGATAGTGAACGGATTATAATAGTTAACGTCGTTAGTAAATAT
TACCGTTAGGAGGAGTGAAA

Downstream 100 bases:

>100_bases
TACATACGAAAAAGATTACCATTTAGATATACATGGTAAACATTATAGCCGAATCGGAATGCTTATTTTGATTCTGGTTG
GTACATTTGGAGCCATGTTG

Product: transcription regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEAGKQIVPSKIAKFTHTSTARIATILNNLESKNLVTRE
ISRTDRRKILVAITDKGRHVAEEIRVEACSNLARVFEEMGEERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA

Sequences:

>Translated_154_residues
MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEAGKQIVPSKIAKFTHTSTARIATILNNLESKNLVTRE
ISRTDRRKILVAITDKGRHVAEEIRVEACSNLARVFEEMGEERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA
>Mature_154_residues
MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEAGKQIVPSKIAKFTHTSTARIATILNNLESKNLVTRE
ISRTDRRKILVAITDKGRHVAEEIRVEACSNLARVFEEMGEERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17680; Mature: 17680

Theoretical pI: Translated: 9.03; Mature: 9.03

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEAGKQIVPSKIAKFTHTS
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCH
TARIATILNNLESKNLVTREISRTDRRKILVAITDKGRHVAEEIRVEACSNLARVFEEMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDSNKAAEVFLTTVIKRGKAEMMHRFNTYSQGEHLVLGYLYKEAGKQIVPSKIAKFTHTS
CCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCH
TARIATILNNLESKNLVTREISRTDRRKILVAITDKGRHVAEEIRVEACSNLARVFEEMG
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
EERTESFIENFKLFLEIGMKLAKEDKEKEEEKNA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA