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The map label for this gene is yjcA

Identifier: 15672881

GI number: 15672881

Start: 919808

End: 921349

Strand: Direct

Name: yjcA

Synonym: L119564

Alternate gene names: 15672881

Gene position: 919808-921349 (Clockwise)

Preceding gene: 15672880

Following gene: 15672882

Centisome position: 38.88

GC content: 33.46

Gene sequence:

>1542_bases
ATGTCAAATATTGAATTTAAAGACTTAACCTTTGGCTACGGGGATAATCTGATTTTCAATCATGCCCAAATAAATATTGA
TGACCGTTGGAAATTAGGATTAGTAGGGCGAAATGGCCGTGGAAAATCAACCCTTTTAAACTTACTACAAGGTAAAATAA
CTACTGACAGCTCGATAACTACTGACAAAAACTTTGTTTACTTCCCCCAATTACTGACAGAAGAAGATTTTAATGATAAA
GATAAATCTAAAAAACAAAATACTGCTGATAAATATTCTGTAGAAAGTCTGTCAGTAAAAATTACTGACAGAAATTCACA
ATTAACTTATTATGTGCTAAATGAATTAGCCGAATTTGAACAATGGAAATTAGAACGTGAATTATCTTTATTGAAAGTTG
ATTTAGAAATTCTTTGGCGTCCTTTTGGAAGTTTATCAGGTGGGGAACAAACCAAGTGTCTCTTGGCAATTTTATTTTTA
GATGAGGACAATTTTCCACTAATTGATGAACCAACAAATCAATTGGATCTGGAAAGTAGAAAAATAGTTGCTGACTATCT
TCAAAAGAAATCAGGATTTATCGTTGTATCACATGACCGAAATTTTCTTGACGAAGTCTGTGACCACACCTTGGCAATTG
AACGTCAGCAAATAGTTCTCTATCAGGGAAATTTCTCAACCTATGAACGAGAGAAACAGTTGCGTGATGACTTTGAACTT
GCTGAAGACGAAAAATTACGTAAAGATATTTCAAGGCTGAAAAAGACTTCGTTAGAAAAAAGAGATTGGTCTAATCAACG
AGAAAATGTTGCCGGAGCAACCTTTGTGGATAAAAAAGTTGCCAAAAAACAGAATCAACGAGCAAAATCAATTGAAAAAC
GAATGGGACAGGAAGTTGAGAATAAAGAGAAATTACTCAAAAATATCGAAAAAACTGAACCTCTTATCATGAATTTTCAA
CCTTCACATCATAAAAGACTGATTCAGTTTGAAAATTTTTCTCTTGGATTTACCGAAAAATTACTTTTCCAGCCGATTGA
TTTTTCTTTGAAAGTGGGAGAGATTGCAGCAATTGTCGGACCAAATGGTCAAGGGAAATCAAGTATTTTTAAATATTTAT
CGGGTGATTTTTCTGGTGAGCACAGTGGATTTGTTCAATTTCCTCAGGGAATAAGGCTATCATTTGTCCGTCAGATTTAT
GATAATCGTGGTTATCTGAAAGACTTTGCTACCGAATATCAATTAAATTATGAATTATTTTTAGCTAATCTCAGAAAACT
GGGGATGGAGTGCAAGCAATTTAGCCAAAAGATAGAAACGATGAGTCAAGGGCAACAAAAAAAGGTTGAATTAGCTCGTA
GTTTATCACAAGAAGCAGAGCTTTATCTCTGGGATGAGCCGCTTAATTATCTTGATGTGTTTAATCGTGAACAAATAATT
CAACTTCTAGAAACTTATCATCCAACAATGCTTCTGGTCGAACATGATCAAGCTTTTGTTGAAAAAATTTCTAATCAAAT
TATTAACCTAAAAGATACATAA

Upstream 100 bases:

>100_bases
AAAAGCGGGAATTTGAGATTTATGAACATTCAGAGGAACTCACTCTGAGTTTTCTACTCAAATTAGATTTCTTAATTCTC
ACAAATGAGAGGAGAATTAA

Downstream 100 bases:

>100_bases
ATTTAAAAAATAAAAGTAGAGTGATTTTACTCTACTTTTTTAGAATACTTTTATATAATAGAAAATATGAATAAAGCAAA
GCGCACAATTTTGTTTTTAT

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 512

Protein sequence:

>513_residues
MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSITTDKNFVYFPQLLTEEDFNDK
DKSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFEQWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFL
DEDNFPLIDEPTNQLDLESRKIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFEL
AEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVENKEKLLKNIEKTEPLIMNFQ
PSHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVGPNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIY
DNRGYLKDFATEYQLNYELFLANLRKLGMECKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQII
QLLETYHPTMLLVEHDQAFVEKISNQIINLKDT

Sequences:

>Translated_513_residues
MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSITTDKNFVYFPQLLTEEDFNDK
DKSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFEQWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFL
DEDNFPLIDEPTNQLDLESRKIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFEL
AEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVENKEKLLKNIEKTEPLIMNFQ
PSHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVGPNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIY
DNRGYLKDFATEYQLNYELFLANLRKLGMECKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQII
QLLETYHPTMLLVEHDQAFVEKISNQIINLKDT
>Mature_512_residues
SNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSITTDKNFVYFPQLLTEEDFNDKD
KSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFEQWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFLD
EDNFPLIDEPTNQLDLESRKIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFELA
EDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVENKEKLLKNIEKTEPLIMNFQP
SHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVGPNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIYD
NRGYLKDFATEYQLNYELFLANLRKLGMECKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQIIQ
LLETYHPTMLLVEHDQAFVEKISNQIINLKDT

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=533, Percent_Identity=22.8893058161351, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI10947135, Length=536, Percent_Identity=24.4402985074627, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI69354671, Length=536, Percent_Identity=24.4402985074627, Blast_Score=119, Evalue=8e-27,
Organism=Homo sapiens, GI27881506, Length=522, Percent_Identity=21.455938697318, Blast_Score=102, Evalue=7e-22,
Organism=Homo sapiens, GI10947137, Length=522, Percent_Identity=21.455938697318, Blast_Score=101, Evalue=1e-21,
Organism=Escherichia coli, GI1789751, Length=537, Percent_Identity=26.4432029795158, Blast_Score=156, Evalue=4e-39,
Organism=Escherichia coli, GI2367384, Length=516, Percent_Identity=25.5813953488372, Blast_Score=142, Evalue=4e-35,
Organism=Escherichia coli, GI1787041, Length=552, Percent_Identity=24.2753623188406, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1787182, Length=547, Percent_Identity=25.4113345521024, Blast_Score=124, Evalue=1e-29,
Organism=Escherichia coli, GI1786563, Length=189, Percent_Identity=26.984126984127, Blast_Score=66, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17559834, Length=521, Percent_Identity=22.6487523992322, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17555318, Length=527, Percent_Identity=23.719165085389, Blast_Score=113, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17553372, Length=555, Percent_Identity=23.2432432432432, Blast_Score=111, Evalue=1e-24,
Organism=Saccharomyces cerevisiae, GI6321121, Length=551, Percent_Identity=25.7713248638838, Blast_Score=119, Evalue=1e-27,
Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=20.6049149338374, Blast_Score=107, Evalue=4e-24,
Organism=Saccharomyces cerevisiae, GI6324314, Length=181, Percent_Identity=29.2817679558011, Blast_Score=86, Evalue=2e-17,
Organism=Saccharomyces cerevisiae, GI6325030, Length=228, Percent_Identity=28.0701754385965, Blast_Score=83, Evalue=1e-16,
Organism=Saccharomyces cerevisiae, GI6323278, Length=181, Percent_Identity=28.7292817679558, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24666836, Length=531, Percent_Identity=25.8003766478343, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24641342, Length=543, Percent_Identity=25.7826887661142, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24642252, Length=512, Percent_Identity=24.4140625, Blast_Score=116, Evalue=4e-26,
Organism=Drosophila melanogaster, GI18859989, Length=512, Percent_Identity=24.4140625, Blast_Score=116, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 59740; Mature: 59608

Theoretical pI: Translated: 5.62; Mature: 5.62

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSIT
CCCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
TDKNFVYFPQLLTEEDFNDKDKSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFE
CCCCEEECCHHHCCCCCCCCHHHHHHCCCHHEEEEEEEEEEECCCCCCHHHHHHHHHHHH
QWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFLDEDNFPLIDEPTNQLDLESR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHH
KIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFEL
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHH
AEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVE
CHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
NKEKLLKNIEKTEPLIMNFQPSHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVG
HHHHHHHHHHHCCCEEEECCCCHHHHEEEECCCCCCCHHHHHHCCCCCEEEECCEEEEEC
PNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIYDNRGYLKDFATEYQLNYELF
CCCCCHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHEEHHHHH
LANLRKLGMECKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQII
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHHHH
QLLETYHPTMLLVEHDQAFVEKISNQIINLKDT
HHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SNIEFKDLTFGYGDNLIFNHAQINIDDRWKLGLVGRNGRGKSTLLNLLQGKITTDSSIT
CCCCCEEEEECCCCCEEEEEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCCCCCCC
TDKNFVYFPQLLTEEDFNDKDKSKKQNTADKYSVESLSVKITDRNSQLTYYVLNELAEFE
CCCCEEECCHHHCCCCCCCCHHHHHHCCCHHEEEEEEEEEEECCCCCCHHHHHHHHHHHH
QWKLERELSLLKVDLEILWRPFGSLSGGEQTKCLLAILFLDEDNFPLIDEPTNQLDLESR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCHHH
KIVADYLQKKSGFIVVSHDRNFLDEVCDHTLAIERQQIVLYQGNFSTYEREKQLRDDFEL
HHHHHHHHCCCCEEEEECCCHHHHHHHHHHHEEECCEEEEEECCCCHHHHHHHHHHHHHH
AEDEKLRKDISRLKKTSLEKRDWSNQRENVAGATFVDKKVAKKQNQRAKSIEKRMGQEVE
CHHHHHHHHHHHHHHHCCHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHH
NKEKLLKNIEKTEPLIMNFQPSHHKRLIQFENFSLGFTEKLLFQPIDFSLKVGEIAAIVG
HHHHHHHHHHHCCCEEEECCCCHHHHEEEECCCCCCCHHHHHHCCCCCEEEECCEEEEEC
PNGQGKSSIFKYLSGDFSGEHSGFVQFPQGIRLSFVRQIYDNRGYLKDFATEYQLNYELF
CCCCCHHHHHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHEEHHHHH
LANLRKLGMECKQFSQKIETMSQGQQKKVELARSLSQEAELYLWDEPLNYLDVFNREQII
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHCCHHHHH
QLLETYHPTMLLVEHDQAFVEKISNQIINLKDT
HHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]