Click here to switch to the map view.

The map label for this gene is yjaF

Identifier: 15672865

GI number: 15672865

Start: 906609

End: 906941

Strand: Direct

Name: yjaF

Synonym: L106356

Alternate gene names: 15672865

Gene position: 906609-906941 (Clockwise)

Preceding gene: 15672864

Following gene: 15672866

Centisome position: 38.32

GC content: 38.44

Gene sequence:

>333_bases
ATGGCAGATAAATACACAGAAGAGCAAGTGAATGAAATCAAGGACAAAATTCTCTCTGCCCTTGAAAACGTCATTGACCC
AGAGCTTGGGATTGATATTATCAACCTCGGATTAGTTTATGAAATTAGCTTTGAAGATAACGGATTTACAGAAATTAAAA
TGACATTGACAACAATGGGTTGCCCTTTGGCGGACCTTTTGACTGAACAAATTCATGATGCTTTGAAAGAAGTGCCAGAA
GTTGGTGAAATCAAGGTGAACTTGGTTTGGTATCCAGCATGGACAGTTGATAAAATGAGTCGTTATGCCCGTATTGCTTT
GGGAATTCGATAA

Upstream 100 bases:

>100_bases
ATAAAGCTGTAAAAAGAATTTGACAATTTGGATTTGTCCTAGAAAGCACATTCGTTCAACTTTTAAAGTTTTGCTTTTTA
TGACAGCCTAAGGAGATAAA

Downstream 100 bases:

>100_bases
ATATAATAAAAAACTCCTTAGTCAGCATTGACTAGGGAGTTTTTTATTTATTAACGAAATTCATTATTCAATTATAAGCT
TTTTGTCTGTATATTTTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISFEDNGFTEIKMTLTTMGCPLADLLTEQIHDALKEVPE
VGEIKVNLVWYPAWTVDKMSRYARIALGIR

Sequences:

>Translated_110_residues
MADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISFEDNGFTEIKMTLTTMGCPLADLLTEQIHDALKEVPE
VGEIKVNLVWYPAWTVDKMSRYARIALGIR
>Mature_109_residues
ADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISFEDNGFTEIKMTLTTMGCPLADLLTEQIHDALKEVPEV
GEIKVNLVWYPAWTVDKMSRYARIALGIR

Specific function: Unknown

COG id: COG2151

COG function: function code R; Predicted metal-sulfur cluster biosynthetic enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MIP18 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002744 [H]

Pfam domain/function: PF01883 DUF59 [H]

EC number: NA

Molecular weight: Translated: 12472; Mature: 12340

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISFEDNGFTEIKMTLTTMG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEECC
CPLADLLTEQIHDALKEVPEVGEIKVNLVWYPAWTVDKMSRYARIALGIR
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ADKYTEEQVNEIKDKILSALENVIDPELGIDIINLGLVYEISFEDNGFTEIKMTLTTMG
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEECCCCCEEEEEEEEECC
CPLADLLTEQIHDALKEVPEVGEIKVNLVWYPAWTVDKMSRYARIALGIR
CCHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353931; 9025291; 9384377 [H]