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The map label for this gene is hslB

Identifier: 15672862

GI number: 15672862

Start: 902908

End: 903255

Strand: Direct

Name: hslB

Synonym: L102634

Alternate gene names: 15672862

Gene position: 902908-903255 (Clockwise)

Preceding gene: 15672861

Following gene: 15672864

Centisome position: 38.17

GC content: 36.78

Gene sequence:

>348_bases
ATGGCGTCGAAACAGGAGTTAATTGATTATGTAGCAGACCGTACAGAACTTTCAAAAGTAAATGCAGCAAAGGCAATCAA
TGCCTTTGTCGAGGCAATCACTTACTATATTTCTGAAGGGACTCCCGTACATATTTCAAATTTTGGGACTTTTGAGGTTC
GTAAACGTGCAGCCAGAGTCAGTCATGATGTTCATTCAAGAGAAAAAATTTTAGTAGGCGAACAAAATATTCCGGTATTT
AGAGCTGGAAAAGCTTTAAAATTGGCTACGAAACAAGAACTATCTGATGAAGATATGGTGATTGAAACATTGAGCAATAT
GATTTTGGAAGTTCAGCAACATGATTAA

Upstream 100 bases:

>100_bases
TAGGATTTTTTATGAAGATTTATATGATGACAAAAGAATTCACTAGAGTTAGTGAAGAAAAGGATGATAGGGGAATGTAG
AAAATAGGAGGAATGAGTTA

Downstream 100 bases:

>100_bases
CACCTGTTAATGGCTGTTATTTTCCAAATAGAATGATAAAAAACGATTCTTCTAAAAGAACCGTTTTTTTTTTAATTTAT
GAGCTCAACTAATAGATTAG

Product: HU-like DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVHISNFGTFEVRKRAARVSHDVHSREKILVGEQNIPVF
RAGKALKLATKQELSDEDMVIETLSNMILEVQQHD

Sequences:

>Translated_115_residues
MASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVHISNFGTFEVRKRAARVSHDVHSREKILVGEQNIPVF
RAGKALKLATKQELSDEDMVIETLSNMILEVQQHD
>Mature_114_residues
ASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVHISNFGTFEVRKRAARVSHDVHSREKILVGEQNIPVFR
AGKALKLATKQELSDEDMVIETLSNMILEVQQHD

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions [H]

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family [H]

Homologues:

Organism=Escherichia coli, GI1786644, Length=85, Percent_Identity=38.8235294117647, Blast_Score=72, Evalue=7e-15,
Organism=Escherichia coli, GI1790433, Length=89, Percent_Identity=40.4494382022472, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: 860 Molecules/Cell In: Growth-Phase, Minimal Media (Based on E. coli). 2040 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000119
- InterPro:   IPR020816
- InterPro:   IPR010992 [H]

Pfam domain/function: PF00216 Bac_DNA_binding [H]

EC number: NA

Molecular weight: Translated: 12916; Mature: 12785

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVHISNFGTFEVRKRAARV
CCCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
SHDVHSREKILVGEQNIPVFRAGKALKLATKQELSDEDMVIETLSNMILEVQQHD
HHHHCCCCEEEECCCCCCEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ASKQELIDYVADRTELSKVNAAKAINAFVEAITYYISEGTPVHISNFGTFEVRKRAARV
CCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHH
SHDVHSREKILVGEQNIPVFRAGKALKLATKQELSDEDMVIETLSNMILEVQQHD
HHHHCCCCEEEECCCCCCEEECCCEEEHHHHHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]