Click here to switch to the map view.

The map label for this gene is yigC

Identifier: 15672827

GI number: 15672827

Start: 863010

End: 863438

Strand: Direct

Name: yigC

Synonym: L862989

Alternate gene names: 15672827

Gene position: 863010-863438 (Clockwise)

Preceding gene: 15672826

Following gene: 15672828

Centisome position: 36.48

GC content: 30.07

Gene sequence:

>429_bases
ATGATAAAAATATACACAGTAGCATCTTGTAGCTCTTGTAAAAAAGCAAAAGAATGGTTGGAGAAACAAAATCTTGCTTA
CCAAGAAATAAATTTGGTTACGAGTCGAATTTGTAAGGAAGATATATTAGAGATTTTAGCATTGACTGAGGAAGGAACTG
GAGATATCATTTCTAGAAGAAGTCAAGCTTATCAACGATTAAATATTGATTTTGAAACGATTAAATTAAATGATTTGATT
CAAATAATTGAAGAAAATCCAACGCTCTTACGTCGACCTTTAATTGTCGATCATAAGCGACTACAAGTTGGTTACAATGA
TGATGAGATTAGAAAATTTTTACCAAGAAAAAAGAGAGAGATTCAAATTAAAGTGGCAACAGAAGCTTCTTATAATTTGG
ATATTGAAGAACAATTTCATGAAGGATAA

Upstream 100 bases:

>100_bases
AATTTTTTCCTCATGATACCCTTTACAAATTGTCTTTTTATGGTAAAATATAATTAAGATATAAATGAGAAAGCCATAAG
AAAAAAATGAGGTGAACACT

Downstream 100 bases:

>100_bases
TTCAGTAGTTAGGCTACTGAATTTTTTCTATATAAAGCAAAATAGTTTATTATTTTAGAGAAAAAAAGTAGAATTAAGCT
AAAGTGTTGTATCATGAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEGTGDIISRRSQAYQRLNIDFETIKLNDLI
QIIEENPTLLRRPLIVDHKRLQVGYNDDEIRKFLPRKKREIQIKVATEASYNLDIEEQFHEG

Sequences:

>Translated_142_residues
MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEGTGDIISRRSQAYQRLNIDFETIKLNDLI
QIIEENPTLLRRPLIVDHKRLQVGYNDDEIRKFLPRKKREIQIKVATEASYNLDIEEQFHEG
>Mature_142_residues
MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEGTGDIISRRSQAYQRLNIDFETIKLNDLI
QIIEENPTLLRRPLIVDHKRLQVGYNDDEIRKFLPRKKREIQIKVATEASYNLDIEEQFHEG

Specific function: Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development-promoting processes and to increase transcription of genes invo

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family. Spx subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 16651; Mature: 16651

Theoretical pI: Translated: 5.85; Mature: 5.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEGTGDIISRR
CEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SQAYQRLNIDFETIKLNDLIQIIEENPTLLRRPLIVDHKRLQVGYNDDEIRKFLPRKKRE
HHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHCCCEECCCEEEECCCHHHHHHHCCCCCCE
IQIKVATEASYNLDIEEQFHEG
EEEEEECCCCCCCCHHHHCCCC
>Mature Secondary Structure
MIKIYTVASCSSCKKAKEWLEKQNLAYQEINLVTSRICKEDILEILALTEEGTGDIISRR
CEEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
SQAYQRLNIDFETIKLNDLIQIIEENPTLLRRPLIVDHKRLQVGYNDDEIRKFLPRKKRE
HHHHHHHCCCEEEEEHHHHHHHHHCCCHHHHCCCEECCCEEEECCCHHHHHHHCCCCCCE
IQIKVATEASYNLDIEEQFHEG
EEEEEECCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA