| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yibE
Identifier: 15672789
GI number: 15672789
Start: 816609
End: 817790
Strand: Direct
Name: yibE
Synonym: L16606
Alternate gene names: NA
Gene position: 816609-817790 (Clockwise)
Preceding gene: 15672788
Following gene: 15672790
Centisome position: 34.52
GC content: 34.09
Gene sequence:
>1182_bases TTGATTTGTCATAAAAAAATAGGACTAAAATTCATTGTTTTAGTCGATGAAAAAAGGAAAGTTATGAATATAAAATGGAT ATTCAAGAAAATGCTACTTCCCATAATCTTTGCTATTGTTGCATTTTTTCTTGTGAGTCATGACCAATTTTTGTACGAGG CGCCAGTTGGCAAAATTACGGTTGCCAAAACGGTAAGTAGTCACGAAGTGAGTGATGATTTTCAAAATAAAGACCGTCAA GTCACGCAAGAATTGTCAATAAAAGTCCTCAATACAAAAGGAGCAGAGCCTGGCAATTTAAATTTAAAAAACACAACAAC TCTCTCTCAAACAACAGGAAAAATTTATCGTGTTGGTCAGCAAGTAATTTTAAAGAAAATATCGGGAAATTATCAAATTG TGACCTTAAAAAGGGATGCACTAATTGTTGGACTACTCGTTTTATTTATTGGTTTTGTCATTAGTTTTGAACGATTTAGA GCTTCAATTTTTCTTTTCTTATCTCTGGTCTTAAACCTTCTTTACTTTGTGATTGTCATCGCCCTTAACGTTGAATTTAA TCCACCTGTCATTTTGCTATTTGGGATTCTGTCAGTAATTTTTGCAGCTTCCTCCCTTTTATTTGTCTTGGGACCCACAA AACAGATGCTCTATACTTTTATAACTACCGTATTAACCACTGCTTTAACTTTTTCAATTGTTTTATTCGTTCTAAAAATG ACAGGGAATTCGGGTATTCATTTTGAATACTTGGACTATGTCACCCAAAATCCATCAGAGTTTTTCTTTGTTGGGACAAT GATTTCAGTTTTAGGGGCAATCATGGATGGTACAGGTGATATTGTTGCAGGGCTTTTTGGTATGGCTAGACAAAATAAAT TGAACAAAATAAATATGGTCAGAAAAGATTACATTAAATCAGGAATTTCAATTGGGCAAGAGCTCATTGGAACTTTGACA AATGTTTTGTTCATGATTTTCATGGCGGAAACTTTGCCGATGACGCTTTTATTATTGAGAAATGGAAATTCTTGGTCTTA TATTGCAACGGTTGGTCTTAATCTTGGGTTATTACAAACAATTATTTCGGCCATTGGAATCGTGTTAGCTGTGCCAATTA CCGCTGTTTTCACAAGTTTTGCTTTGACTAGAAGTCATCAAGGAAAGGAGAGTTCTTTATGA
Upstream 100 bases:
>100_bases GTCTAAAGAAGCTTTAGCAACTTTGCATGATACGATAGAACATTCTGATAAAGTCAGTGATTTAAAAGCCTAATAAAAAA GACGGCAGTTTTGTCGTCTT
Downstream 100 bases:
>100_bases ATGCACTCTTGATCCTATTAATTTTACTGATTGTGTTGATGCTTATCGTTGCCAAAAAAGATGGCTTACGAAATTTAATT GGTTTGACCTTTAATTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: YibE/F Family Protein; Integral Membrane Protein; Lipoprotein; YibE/F Superfamily Transporter; YibE/F-Like Protein
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFLVSHDQFLYEAPVGKITVAKTVSSHEVSDDFQNKDRQ VTQELSIKVLNTKGAEPGNLNLKNTTTLSQTTGKIYRVGQQVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFR ASIFLFLSLVLNLLYFVIVIALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLYTFITTVLTTALTFSIVLFVLKM TGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMDGTGDIVAGLFGMARQNKLNKINMVRKDYIKSGISIGQELIGTLT NVLFMIFMAETLPMTLLLLRNGNSWSYIATVGLNLGLLQTIISAIGIVLAVPITAVFTSFALTRSHQGKESSL
Sequences:
>Translated_393_residues MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFLVSHDQFLYEAPVGKITVAKTVSSHEVSDDFQNKDRQ VTQELSIKVLNTKGAEPGNLNLKNTTTLSQTTGKIYRVGQQVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFR ASIFLFLSLVLNLLYFVIVIALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLYTFITTVLTTALTFSIVLFVLKM TGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMDGTGDIVAGLFGMARQNKLNKINMVRKDYIKSGISIGQELIGTLT NVLFMIFMAETLPMTLLLLRNGNSWSYIATVGLNLGLLQTIISAIGIVLAVPITAVFTSFALTRSHQGKESSL >Mature_393_residues MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFLVSHDQFLYEAPVGKITVAKTVSSHEVSDDFQNKDRQ VTQELSIKVLNTKGAEPGNLNLKNTTTLSQTTGKIYRVGQQVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFR ASIFLFLSLVLNLLYFVIVIALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLYTFITTVLTTALTFSIVLFVLKM TGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMDGTGDIVAGLFGMARQNKLNKINMVRKDYIKSGISIGQELIGTLT NVLFMIFMAETLPMTLLLLRNGNSWSYIATVGLNLGLLQTIISAIGIVLAVPITAVFTSFALTRSHQGKESSL
Specific function: Unknown
COG id: COG5438
COG function: function code S; Predicted multitransmembrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43618; Mature: 43618
Theoretical pI: Translated: 10.26; Mature: 10.26
Prosite motif: PS00079 MULTICOPPER_OXIDASE1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFLVSHDQFLYEAPVGKIT CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEE VAKTVSSHEVSDDFQNKDRQVTQELSIKVLNTKGAEPGNLNLKNTTTLSQTTGKIYRVGQ EEECCCHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH QVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFRASIFLFLSLVLNLLYFVIVI HHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLYTFITTVLTTALTFSIVLFVLKM HHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMDGTGDIVAGLFGMARQNKLNKINMV CCCCCCEEHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH RKDYIKSGISIGQELIGTLTNVLFMIFMAETLPMTLLLLRNGNSWSYIATVGLNLGLLQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCHHHHHH IISAIGIVLAVPITAVFTSFALTRSHQGKESSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MICHKKIGLKFIVLVDEKRKVMNIKWIFKKMLLPIIFAIVAFFLVSHDQFLYEAPVGKIT CCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHEECCCCCEE VAKTVSSHEVSDDFQNKDRQVTQELSIKVLNTKGAEPGNLNLKNTTTLSQTTGKIYRVGQ EEECCCHHCCCHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHH QVILKKISGNYQIVTLKRDALIVGLLVLFIGFVISFERFRASIFLFLSLVLNLLYFVIVI HHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALNVEFNPPVILLFGILSVIFAASSLLFVLGPTKQMLYTFITTVLTTALTFSIVLFVLKM HHCCCCCCCHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH TGNSGIHFEYLDYVTQNPSEFFFVGTMISVLGAIMDGTGDIVAGLFGMARQNKLNKINMV CCCCCCEEHHHHHHHCCCCCEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHH RKDYIKSGISIGQELIGTLTNVLFMIFMAETLPMTLLLLRNGNSWSYIATVGLNLGLLQT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCEEEEEEECCCHHHHHH IISAIGIVLAVPITAVFTSFALTRSHQGKESSL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA