| Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
|---|---|
| Accession | NC_002662 |
| Length | 2,365,589 |
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The map label for this gene is yhgB
Identifier: 15672736
GI number: 15672736
Start: 760781
End: 761296
Strand: Direct
Name: yhgB
Synonym: L160697
Alternate gene names: 15672736
Gene position: 760781-761296 (Clockwise)
Preceding gene: 15672735
Following gene: 15672737
Centisome position: 32.16
GC content: 31.59
Gene sequence:
>516_bases TTGACAATCAATCAAAGAACTATTTTTTCAGGTTGTTCTTTCAAAAACACAACCTTTGAATTTACTGACAATACGATCAG TGAATTTACAGATTGCCTTTTTGAAAAATGTGATTTTTCCAATTTAAACTTCAATAAAATTGGCATTTATCGCTCAATCT TTAAATCCTGCAAATTGCTAGGAACTGATTTTACTGAAAGTCACTTACAAGACCTTCAGTTTACAGAAAATCTAATGACT TATGCAAATTTTTCAGGTTCTACCTTAAAGTCAGTCCGCTTTTTAGAAAATGAAGCTAAAGAAACCTTCTTTACTGCCTG TAATTTTAAGAATGTGGAGCTTTTAAAAAATCAATTAGAAGCAGCAAATTTTTGGGAAACAGCACTTGCAGGAATTGATT TTTCTACGAATCAATTTGAACGCATGGAAGTTACACCTCAACTCGCTAAAAATATGAAGATAAGTCTTAGTCAAGCCCCA TTTTTTACTAGCCTGTTTGGCATTGAAATTATCTAA
Upstream 100 bases:
>100_bases GAAAATCTTAGAACCGAAACTTCCAGCCACCTATCAAGTAGCCACAAGTCAAGATTTTATTGATGGAGAAATTTATCAAG CAGAATTTATAGATAAAACT
Downstream 100 bases:
>100_bases AATGAACCTCGAAACCCAAATCTAAAATTATATAGTCTATGGATTACAAACTTCTTCACTATTATAATTTTTTATCCAAT AAGTAAACAAAGAAAGAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNFNKIGIYRSIFKSCKLLGTDFTESHLQDLQFTENLMT YANFSGSTLKSVRFLENEAKETFFTACNFKNVELLKNQLEAANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAP FFTSLFGIEII
Sequences:
>Translated_171_residues MTINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNFNKIGIYRSIFKSCKLLGTDFTESHLQDLQFTENLMT YANFSGSTLKSVRFLENEAKETFFTACNFKNVELLKNQLEAANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAP FFTSLFGIEII >Mature_170_residues TINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNFNKIGIYRSIFKSCKLLGTDFTESHLQDLQFTENLMTY ANFSGSTLKSVRFLENEAKETFFTACNFKNVELLKNQLEAANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAPF FTSLFGIEII
Specific function: Unknown
COG id: COG1357
COG function: function code S; Uncharacterized low-complexity proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 3 pentapeptide repeat domains [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001646 - InterPro: IPR012334 [H]
Pfam domain/function: PF00805 Pentapeptide [H]
EC number: NA
Molecular weight: Translated: 19655; Mature: 19524
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNFNKIGIYRSIFKSCKLL CCCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC GTDFTESHLQDLQFTENLMTYANFSGSTLKSVRFLENEAKETFFTACNFKNVELLKNQLE CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAPFFTSLFGIEII HHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCEEEEECCCCHHHHHHCEECC >Mature Secondary Structure TINQRTIFSGCSFKNTTFEFTDNTISEFTDCLFEKCDFSNLNFNKIGIYRSIFKSCKLL CCCCCEEECCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHC GTDFTESHLQDLQFTENLMTYANFSGSTLKSVRFLENEAKETFFTACNFKNVELLKNQLE CCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH AANFWETALAGIDFSTNQFERMEVTPQLAKNMKISLSQAPFFTSLFGIEII HHHHHHHHHHCCCCCCCCHHHHCCCHHHHCCEEEEECCCCHHHHHHCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9353932; 9384377 [H]