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The map label for this gene is rmaA

Identifier: 15672724

GI number: 15672724

Start: 749729

End: 750205

Strand: Reverse

Name: rmaA

Synonym: L0248

Alternate gene names: 15672724

Gene position: 750205-749729 (Counterclockwise)

Preceding gene: 30024009

Following gene: 15672723

Centisome position: 31.71

GC content: 31.24

Gene sequence:

>477_bases
ATGGAAGACAATCAATATGAATATCAAGGAATCCAATTTATTGGGAAGCTTTCTTCTGAAATTTATAGAAGAGGTTATAT
TTATTTCACAAAACGCTTAGTGCCTTTTGACATCAATTATATTCAATTGCTTTGTTTGATTTCTTTATATATCAAAGACA
ATCAAAGCCAAGAGCAAATTACTGATGATTTAAGTATCGATAAATCTAGTGTTCATCGAGCAATTAAAGGCCTGATTGAA
AAAGAATACGTTAGCAGAGTCCGCGATGAAAAAGATAAACGCGTTTATCGTGTCTCATTGACTCAAAAAGCAAGAGACAT
CCAAACTCAAATTGAAGAAATGACAAAAGAGAGAGAAAACTTGCTATCAGAGGGAATTGATCCCCAAGAAAAAGCAATTG
CATTTAAAGTATTGAATCAAATGACTCAAAATGCAAATCAAATTTATGAAGAGGAAAAGAAGAAAAATGACAAATAA

Upstream 100 bases:

>100_bases
ATGGTTCAATAGACTTCATTATAAAAGTATTTTTATTTTACACGGAAATTAGTTGACAAGACAACTAATTTGAGATATAT
TATATTCGATGGAGGAATTT

Downstream 100 bases:

>100_bases
TTTAAAAAGAGCGGTTGTATTAGGCGGTGGCGGACATTTTGGTATCGCTTGGGAACTCGGATATCTTAGAGGTCTAGAAG
AAGCTGGGCTGCCCATTAGA

Product: MarR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Marr-Family Transcriptional Regulator; Transcriptional Regulator TrmB

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLLCLISLYIKDNQSQEQITDDLSIDKSSVHRAIKGLIE
KEYVSRVRDEKDKRVYRVSLTQKARDIQTQIEEMTKERENLLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK

Sequences:

>Translated_158_residues
MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLLCLISLYIKDNQSQEQITDDLSIDKSSVHRAIKGLIE
KEYVSRVRDEKDKRVYRVSLTQKARDIQTQIEEMTKERENLLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK
>Mature_158_residues
MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLLCLISLYIKDNQSQEQITDDLSIDKSSVHRAIKGLIE
KEYVSRVRDEKDKRVYRVSLTQKARDIQTQIEEMTKERENLLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK

Specific function: Transcription Factor That Activates Expression Of Genes Such As Molecular Chaperones (Grol, Gros, Dnak, Grpe, And Cbpa), Proteins Involved In Acid Resistance (Hdea, Hdeb, And Gada), The Starvation Lipoprotein Slp, Virulence Protein Hlye/Clya. Represses Ex

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18812; Mature: 18812

Theoretical pI: Translated: 6.04; Mature: 6.04

Prosite motif: PS01117 HTH_MARR_1 ; PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLLCLISLYIKDNQSQEQI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH
TDDLSIDKSSVHRAIKGLIEKEYVSRVRDEKDKRVYRVSLTQKARDIQTQIEEMTKEREN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MEDNQYEYQGIQFIGKLSSEIYRRGYIYFTKRLVPFDINYIQLLCLISLYIKDNQSQEQI
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHH
TDDLSIDKSSVHRAIKGLIEKEYVSRVRDEKDKRVYRVSLTQKARDIQTQIEEMTKEREN
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LLSEGIDPQEKAIAFKVLNQMTQNANQIYEEEKKKNDK
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA