Click here to switch to the map view.

The map label for this gene is yhcI

Identifier: 15672703

GI number: 15672703

Start: 727161

End: 727628

Strand: Direct

Name: yhcI

Synonym: L127182

Alternate gene names: 15672703

Gene position: 727161-727628 (Clockwise)

Preceding gene: 15672702

Following gene: 30024007

Centisome position: 30.74

GC content: 41.67

Gene sequence:

>468_bases
ATGAATTTTACAGAAGAAGAAAAAGAATTTTTTATGAAGGAAGCACTCAAAGAAGCGCAGAAAGCAGCTGAAAATGAGGA
AGTTCCGATTGGAGTTGTCATTGTCAAAGACGGCGAAATTATTGCGCGTGATTTCAATAGGCGAGAGCTTGATGGTCGGG
CGACACATCATGCTGAAGTTTGTGCGATTGAAGCGGCAAATCAGGCAGTGGGAAATTGGCGACTTCTTGATTGCGCCCTC
TTTGTTACCATTGAACCTTGTGTCATGTGTGCCGGAGCAATTGGGTTAGCGCGGATTCCACAAGTTTACTTTGGAGCGAC
AAATCCTAAATTTGGAGGAACGGTCAGTCTTTATCAGATTTTAGAAGACAAGCGACTGAATCATCGAGTCCAAGTAGAAT
CGGGGATTTTAGAAGACGAGTGTGCAAAAATCATGCAAGATTTCTTTAAAAATAGACGAAAAAAATAA

Upstream 100 bases:

>100_bases
TATTTGTTTAGATAATACAATTGTCAATGGGACATTAGAACAATTTGAAGCAGTTCCAGTCAAAATATATTGTCTTGAAC
AAGAGAAATTTTTAGGATAA

Downstream 100 bases:

>100_bases
ATTGTGTTATAATAGTTTTCGGAGCAATAAGTTTCTTACGAAGCGTGTCAGGACCTGACGGTAGCAGCACTAAGTATGGA
GCTTATGTGCTCTTTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK

Sequences:

>Translated_155_residues
MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK
>Mature_155_residues
MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEVCAIEAANQAVGNWRLLDCAL
FVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQILEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=161, Percent_Identity=32.9192546583851, Blast_Score=88, Evalue=3e-18,
Organism=Escherichia coli, GI145693172, Length=155, Percent_Identity=41.9354838709677, Blast_Score=136, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17541138, Length=143, Percent_Identity=33.5664335664336, Blast_Score=86, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17554608, Length=99, Percent_Identity=41.4141414141414, Blast_Score=77, Evalue=3e-15,
Organism=Saccharomyces cerevisiae, GI6322425, Length=151, Percent_Identity=28.476821192053, Blast_Score=67, Evalue=1e-12,
Organism=Drosophila melanogaster, GI21355527, Length=149, Percent_Identity=33.5570469798658, Blast_Score=87, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 17503; Mature: 17503

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
CAIEAANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQI
EEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHH
LEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK
HHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNFTEEEKEFFMKEALKEAQKAAENEEVPIGVVIVKDGEIIARDFNRRELDGRATHHAEV
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCHHH
CAIEAANQAVGNWRLLDCALFVTIEPCVMCAGAIGLARIPQVYFGATNPKFGGTVSLYQI
EEEHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCCCCCHHHHHHH
LEDKRLNHRVQVESGILEDECAKIMQDFFKNRRKK
HHHHHCCCEEEHHCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]