Click here to switch to the map view.

The map label for this gene is yhcC

Identifier: 15672697

GI number: 15672697

Start: 721971

End: 722189

Strand: Reverse

Name: yhcC

Synonym: L121994

Alternate gene names: 15672697

Gene position: 722189-721971 (Counterclockwise)

Preceding gene: 15672699

Following gene: 15672696

Centisome position: 30.53

GC content: 30.59

Gene sequence:

>219_bases
ATGAACGGTTATCAACAACAATACACTTGTATCAAATGTGGCAATCATAATTTTGAAGAAGATCAACTTCAAGCAACCGG
TGGAAATTTTTCAAAGATTTTTGATGTTCAAAATAAGAAATTTATTACTATTTCTTGTTCTCAATGTGGTTATACAGAAC
TCTACAAAGCACAAACGAGTACGGGAATGAATATTTTAGATTTTTTACTGAACGGTTAG

Upstream 100 bases:

>100_bases
GATTCAAAAGACTAAAAGAATCAACTTTTTTGAGTTATAATGGATTTAAATAATTAAGAAGACAAGCGATTTTTCACTTT
ACTAACGAGGAGGAGTTAAA

Downstream 100 bases:

>100_bases
CTTAGGTAGTCAATAAATTTGAAAATAAGACTTAGGTCTTATTTTTATTTAAGAAAATTAAGTTATAATGTAAAGTACAT
ACTTATAAGAAAAGGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 72; Mature: 72

Protein sequence:

>72_residues
MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITISCSQCGYTELYKAQTSTGMNILDFLLNG

Sequences:

>Translated_72_residues
MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITISCSQCGYTELYKAQTSTGMNILDFLLNG
>Mature_72_residues
MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITISCSQCGYTELYKAQTSTGMNILDFLLNG

Specific function: Unknown

COG id: COG3478

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018652 [H]

Pfam domain/function: PF09855 DUF2082 [H]

EC number: NA

Molecular weight: Translated: 8143; Mature: 8143

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITISCSQCGYTELYKAQTS
CCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCCC
TGMNILDFLLNG
CCCHHHHHHCCC
>Mature Secondary Structure
MNGYQQQYTCIKCGNHNFEEDQLQATGGNFSKIFDVQNKKFITISCSQCGYTELYKAQTS
CCCCCCCEEEEECCCCCCCCCEEEECCCCCEEEEECCCCEEEEEECCCCCCHHHHHCCCC
TGMNILDFLLNG
CCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]