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The map label for this gene is ybfB

Identifier: 15672138

GI number: 15672138

Start: 159402

End: 160193

Strand: Direct

Name: ybfB

Synonym: L159400

Alternate gene names: NA

Gene position: 159402-160193 (Clockwise)

Preceding gene: 15672135

Following gene: 15672139

Centisome position: 6.74

GC content: 38.51

Gene sequence:

>792_bases
ATGAATAAGAAACAAATAAAAACACTAACAAGCGTCATTGTAGTCATTATTGCACTGGCTGTAGGATATTTTGGTTCGGG
ACGTCTGCATTTGGGACAAGGAAATAATTCGGCTACTGATAATAGTAGCCAAGTTTCCACAAAATCACTGGCAAGTTCGG
TTAAACAAGCTCCTTTAACTTTTAAAAATCAAAGACAAATGGTCATGGCCAATACTGATGCTTTAGGTCGTGCGGTTGAT
TCACATATTCAATTGAAAGATTCTCAAGAACCTAAAGTCAAACGTGAACCCTTGACCTATAATCCGGTTGGTTGGCATAA
TTATAATTTTTATTATAAAAAATCAGATGGTTCGATTGGTAAAATGTGGCTAATGGCTCGTGGCCATTTGGTGGGCTATC
AATTTTCAGGTCTAAATAATGAAGCAAGAAATTTAGTGCCAGAAACGGCTTGGTTCAATGGTGGAAATTTCACTGGAACG
AATGATGGAAATACAGCCAGCATGCTTTATTACGAAAATCGTTTGGACAGTTGGCTTGCAAATCATCCCAATTATTATTT
AGATTACCAAGTGACCCCTCTCTACGAAGGAAATGAACTTTTGCCTCGACAAATTCGTTTGGCTTATGTTGGAATTGATA
AAAATGGTCAAACCTTGTCTATCAAACTCGGTGGTGGTCGTGAAAAGTCAGGAAATGGTGGAGCAACTGTCGTTGTTCTT
GACAATGTCGCTCCAAATGCAAAAATTAATTATGCTGACGGGACCGCAGTTAACACAGTCAGCCCTAAATAG

Upstream 100 bases:

>100_bases
AATATTAAGGGAAGTGGTGTGGTTTAAAAGCTTCTTTAAAATGATTATAAAAGTTTTTCAGAATTGTAAAATCCTTGAAA
TTTTTTGCTATAATTAAGCT

Downstream 100 bases:

>100_bases
TTACTGACAGACTGTTCTGTCAGTAAAATAAAGCTCTGTCAGTAAAAAAATGCTTGAAAAATCAGTCAAAAGACTGAGAA
TTCGGGCTTTTTTTCTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Deoxyribonuclease; Prophage Lp1 Protein; DNA/RNA Non-Specific Endonuclease; Membrane Nuclease; StreptodoRNAse; StreptodoRNAse A Type SdzA; Prophage Nuclease

Number of amino acids: Translated: 263; Mature: 263

Protein sequence:

>263_residues
MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQVSTKSLASSVKQAPLTFKNQRQMVMANTDALGRAVD
SHIQLKDSQEPKVKREPLTYNPVGWHNYNFYYKKSDGSIGKMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGT
NDGNTASMLYYENRLDSWLANHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQTLSIKLGGGREKSGNGGATVVVL
DNVAPNAKINYADGTAVNTVSPK

Sequences:

>Translated_263_residues
MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQVSTKSLASSVKQAPLTFKNQRQMVMANTDALGRAVD
SHIQLKDSQEPKVKREPLTYNPVGWHNYNFYYKKSDGSIGKMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGT
NDGNTASMLYYENRLDSWLANHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQTLSIKLGGGREKSGNGGATVVVL
DNVAPNAKINYADGTAVNTVSPK
>Mature_263_residues
MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQVSTKSLASSVKQAPLTFKNQRQMVMANTDALGRAVD
SHIQLKDSQEPKVKREPLTYNPVGWHNYNFYYKKSDGSIGKMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGT
NDGNTASMLYYENRLDSWLANHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQTLSIKLGGGREKSGNGGATVVVL
DNVAPNAKINYADGTAVNTVSPK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28855; Mature: 28855

Theoretical pI: Translated: 9.87; Mature: 9.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQVSTKSLASSVKQAPLT
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
FKNQRQMVMANTDALGRAVDSHIQLKDSQEPKVKREPLTYNPVGWHNYNFYYKKSDGSIG
ECCCCEEEEECCHHHHHHHHCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEE
KMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGTNDGNTASMLYYENRLDSWLA
EEEEEECCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEHHHHHHHHH
NHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQTLSIKLGGGREKSGNGGATVVVL
CCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
DNVAPNAKINYADGTAVNTVSPK
CCCCCCCEEEECCCCEEECCCCC
>Mature Secondary Structure
MNKKQIKTLTSVIVVIIALAVGYFGSGRLHLGQGNNSATDNSSQVSTKSLASSVKQAPLT
CCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCE
FKNQRQMVMANTDALGRAVDSHIQLKDSQEPKVKREPLTYNPVGWHNYNFYYKKSDGSIG
ECCCCEEEEECCHHHHHHHHCEEEECCCCCCCCCCCCCEECCCCCCCCEEEEEECCCCEE
KMWLMARGHLVGYQFSGLNNEARNLVPETAWFNGGNFTGTNDGNTASMLYYENRLDSWLA
EEEEEECCEEEEEEECCCCCHHHHCCCCCEEECCCCCCCCCCCCEEEEEEEHHHHHHHHH
NHPNYYLDYQVTPLYEGNELLPRQIRLAYVGIDKNGQTLSIKLGGGREKSGNGGATVVVL
CCCCEEEEEEEEEEECCCCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEEE
DNVAPNAKINYADGTAVNTVSPK
CCCCCCCEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA