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The map label for this gene is ybdG

Identifier: 15672114

GI number: 15672114

Start: 135110

End: 135430

Strand: Direct

Name: ybdG

Synonym: L135065

Alternate gene names: NA

Gene position: 135110-135430 (Clockwise)

Preceding gene: 15672113

Following gene: 15672115

Centisome position: 5.71

GC content: 33.02

Gene sequence:

>321_bases
ATGGATTTTTCTAAATATTTCAAGAAAAAGAATGACAGTAAGGTAAAAAATTTTTCAAAGTTAGAAATTTTTGAGAAAGT
CAATGACGAAGAATTGATAGAGGTTTCTGGAGGAAATTTTTCTAGTAATCTTCGACAAAAAAGGGCTATAGCGGGGCTGA
CACAAAAAGAACTTGGGAAACTGCTTTATTCGAGTAAACAAGCTGTCTGTAATTGGGAGCACGGGCGACGTGAACCGAGT
TTAGAAGTTGTTCAAGAGATGGCAAATGTGTTTAAATGTTCAATAGATGATTTGTTAAAAGATAGTGAAAATATAAACTA
A

Upstream 100 bases:

>100_bases
TGTACATGGCGGCTGGAAACATTTTACCTTAAATATAATTAAAGTAGGAGACTAGTTTAAAAAAACTAGTCTTTTGATTA
CTTTTTTGGGAGGAAATCTG

Downstream 100 bases:

>100_bases
AAGTACACAAAAAGAATATTAAAGTAGTATTGACTAAATATTCAGAAAAGTTTAAAATATACTTGTAATTGATTACGAAG
ATACTGAAAATTTGATGAGC

Product: transcription regulator

Products: NA

Alternate protein names: Transcription Regulator; XRE Family Transcriptional Regulator

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNLRQKRAIAGLTQKELGKLLYSSKQAVCNWEHGRREPS
LEVVQEMANVFKCSIDDLLKDSENIN

Sequences:

>Translated_106_residues
MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNLRQKRAIAGLTQKELGKLLYSSKQAVCNWEHGRREPS
LEVVQEMANVFKCSIDDLLKDSENIN
>Mature_106_residues
MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNLRQKRAIAGLTQKELGKLLYSSKQAVCNWEHGRREPS
LEVVQEMANVFKCSIDDLLKDSENIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12206; Mature: 12206

Theoretical pI: Translated: 8.20; Mature: 8.20

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNLRQKRAIAGLTQKELGK
CCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHH
LLYSSKQAVCNWEHGRREPSLEVVQEMANVFKCSIDDLLKDSENIN
HHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCC
>Mature Secondary Structure
MDFSKYFKKKNDSKVKNFSKLEIFEKVNDEELIEVSGGNFSSNLRQKRAIAGLTQKELGK
CCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCHHHHHH
LLYSSKQAVCNWEHGRREPSLEVVQEMANVFKCSIDDLLKDSENIN
HHHHCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA