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The map label for this gene is ybaG

Identifier: 15672087

GI number: 15672087

Start: 106055

End: 107011

Strand: Direct

Name: ybaG

Synonym: L106031

Alternate gene names: 15672087

Gene position: 106055-107011 (Clockwise)

Preceding gene: 15672086

Following gene: 15672088

Centisome position: 4.48

GC content: 37.62

Gene sequence:

>957_bases
ATGAAAAAACGTGCACAACGTAACAAAAAACGAATTCGCTGGGCTTCGGTCCTCACAGTTTTCGTTCTTTTAATTGGAAT
AATTGCAATTGCTTTTGCTGGGGTTCATTTGTTAAGTCCTAAAACAAATACAAGCCCAAAAAGCAGTCAAACTTCAAGTC
AAGAAAAAGCTAAAAGCACTGCCTCATCTAGTGCTTCTCAACCAAAAGAAACAAAATGGCTGGCTGGAACAAATGAAAAT
CAACTGCCCATTTTGATGTTTCATTATGTCACTTCAAGGGCTGATCAGCTCCCACAAGATAGTAATAACATCAATATTGT
AACCTTTGAAAATGAATTAAAAGCGCTGAAAGAAAAAGGCTACACAACGGTTAGTGGCTCAGATGCCGAAAAAATTCTAA
CGACCAAAGAAAAACCAAGTGATAAAATGGTTTGGCTTACTTTTGATGATGGTTCAGTCACAATGTACACTGAAATTTTT
CCTTTATTGAAAAAATACAATATGCACGCCACGAATTTTATTATCACAGGTTATGTGAATAAAGGCCAAGGCGGAATTTT
GACCTGGGAACAAATCAAGGAAATGAAAGCAAGTGGACTTGTTGATTTTGGCAGTCATACGGTCAGCCATCCTGATTTAG
GAAAGCTCACTTTGGAAGCTCAACGAACAGAACTTGAACAATCAAAAGCAGATTTAGATAAAAACCTCGAGCAAAAAACA
GATATCATCTGTTATCCAGCAGGGGGTTATAACCAGAATACCTTGAATTTAGCCAACGAGTTAGGCTATAAGTTTGGTTT
GCTTGACCCGGGCCGTAATGGTGCTATTGCAATAGCAGCCAAAGAAAGTGATGGTCTATTAACGCTACCACGCTTTAGAA
TGATGAGTTCTACCACAACTGAGCAAATGCTACAAATGATTCAACCCTCAACCGATTATAATGAAAAAAATAAATAA

Upstream 100 bases:

>100_bases
CGAATTTTAAGAGCAGAAACGGCTCCATTATATGCCCTCTCAAGTATTTCAGCTTATTTTGAATTATTATAAATAAAGAA
AAATTTTTAGGAAATCGATT

Downstream 100 bases:

>100_bases
ACTCCGAATAATCGGAGTTTTATCTTTAGTTTTGCAATAGTCATCCTTTTGCTTAACCTACAAATGTGATAGAATAGATT
AAATTAAGTGAAATAAACCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 318

Protein sequence:

>318_residues
MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNTSPKSSQTSSQEKAKSTASSSASQPKETKWLAGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKEKGYTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIF
PLLKKYNMHATNFIITGYVNKGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTLEAQRTELEQSKADLDKNLEQKT
DIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAIAIAAKESDGLLTLPRFRMMSSTTTEQMLQMIQPSTDYNEKNK

Sequences:

>Translated_318_residues
MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNTSPKSSQTSSQEKAKSTASSSASQPKETKWLAGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKEKGYTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIF
PLLKKYNMHATNFIITGYVNKGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTLEAQRTELEQSKADLDKNLEQKT
DIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAIAIAAKESDGLLTLPRFRMMSSTTTEQMLQMIQPSTDYNEKNK
>Mature_318_residues
MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNTSPKSSQTSSQEKAKSTASSSASQPKETKWLAGTNEN
QLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKEKGYTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIF
PLLKKYNMHATNFIITGYVNKGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTLEAQRTELEQSKADLDKNLEQKT
DIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAIAIAAKESDGLLTLPRFRMMSSTTTEQMLQMIQPSTDYNEKNK

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

Organism=Escherichia coli, GI1786322, Length=248, Percent_Identity=24.5967741935484, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 35365; Mature: 35365

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNTSPKSSQTSSQEKAKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH
ASSSASQPKETKWLAGTNENQLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKEKG
HHCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHCC
YTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIFPLLKKYNMHATNFIITGYVN
CEEECCCCHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEEEEEE
KGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTLEAQRTELEQSKADLDKNLEQKT
CCCCCEEEHHHHHHHHHCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCHHHCC
DIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAIAIAAKESDGLLTLPRFRMMSSTTT
CEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCEEECCHHHHHHCCCH
EQMLQMIQPSTDYNEKNK
HHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MKKRAQRNKKRIRWASVLTVFVLLIGIIAIAFAGVHLLSPKTNTSPKSSQTSSQEKAKST
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHHHH
ASSSASQPKETKWLAGTNENQLPILMFHYVTSRADQLPQDSNNINIVTFENELKALKEKG
HHCCCCCCCCCEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCCEEEEEECHHHHHHHHCC
YTTVSGSDAEKILTTKEKPSDKMVWLTFDDGSVTMYTEIFPLLKKYNMHATNFIITGYVN
CEEECCCCHHHHHCCCCCCCCCEEEEEECCCCEEHHHHHHHHHHHCCCCCCEEEEEEEEE
KGQGGILTWEQIKEMKASGLVDFGSHTVSHPDLGKLTLEAQRTELEQSKADLDKNLEQKT
CCCCCEEEHHHHHHHHHCCCEECCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHCHHHCC
DIICYPAGGYNQNTLNLANELGYKFGLLDPGRNGAIAIAAKESDGLLTLPRFRMMSSTTT
CEEEECCCCCCCCHHHHHHHCCCEEECCCCCCCCEEEEEEECCCCEEECCHHHHHHCCCH
EQMLQMIQPSTDYNEKNK
HHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]