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The map label for this gene is ybaB

Identifier: 15672082

GI number: 15672082

Start: 101709

End: 103262

Strand: Direct

Name: ybaB

Synonym: L101706

Alternate gene names: 15672082

Gene position: 101709-103262 (Clockwise)

Preceding gene: 15672081

Following gene: 15672083

Centisome position: 4.3

GC content: 37.84

Gene sequence:

>1554_bases
ATGAGTATTTTAAATGTAAAAAATCTATCCCACGGTTTTGGTGACCGCGCAATTTTTGAAGATGTAAGTTTCCGTTTGCT
AAAAGGCGAGCACATCGGATTTGTTGGGGCAAATGGTGAGGGTAAATCAACTTTCATGAATATTATCACAGGAACTCTGG
TTCCTGATGAGGGAAAAGTAATCTGGTCGAAAAAACACCGGGTTGGCTATATGGATCAACACGCTGTGCTTGGAAAAGGT
AAAACGACACGTGAAGCATTGGCTGAGGCTTTTCAATATCTTTTTGATATAGAAGCGCAAATCAATGATACTTACATGAA
AATGGCAGAAATGTCAGAAGATGAGATGAATGCTGCGCTTGAGAATGTAGGAGAACTTCAAGAAGAATTGGATAATAGTG
ACTTTTATCTCATTGATGCCAAAGTTGAAGAAACAGCACGAGGTCTTGGTTTAACTCCTCTTTTGGATAAAGATGTAGCC
GAGCTTTCTGGAGGGCAAAGAACAAAAATTTTACTTGGTAAACTTTTGCTTGAAAAACCAGATATCTTGCTTTTGGATGA
ACCAACAAACTATTTGGATGAAGAACATATTTTATGGTTGAAAAATTACCTTAAAAACTATGAAAATGCATTTATTTTGA
TTTCGCATGATGTGCCCTTTATGGATGAAGTGGTCAATATCATTTATCATGTGCATGGTCTAGGGATTACCCGCTATTCA
ATGGGGTATGCGGAATTTGAACGTGTCTTTGAAGAGAAAAAGGCACAGCTTGAATCTTTGCATAATGCGCAGGTCGCTGA
GCAAGCTAAACTTAAAGATTTCATTGCCCGTAAAAAAGCGAATGTGGCAACGTCTGGGCAAGCAAAAGCGCGTGAGAAAA
AATTGGCGAAAATGGAAATTGTTGAGACTATTTCTGAAAAGCCAAAACCTCATTTTGATTTTAAATTTAGTCGAAAACCA
AGTCGTCTCGTTTTTGAGGCAAAAGATTTAGTTATTGGTTACAATGAACCTTTGTCGTCAGAAATTAATTTAAAAGTAGA
ATCTGGACAAAAAATTGCCTTTATTGGTTCCAATGGGATTGGGAAATCGACTTTGCTCAAGAGTTTAATGGGCTTGATTC
CAAGTCTTGATGGGGAAGTTGAAAAAGGAAATTTCCAAGATATTGCTTACTATGAGCAAGAAATCAAAAATCCTTCGCAA
AAAACGGTACTTGATGATTTATGGGATGAGTATCCAAGTTGGAATCAAGCAGAACTCCGCGGGGCACTTGCTCGGGTGGG
CTTGACGGCCAAACAAATTGAATCACGTGTTTATGTTCTTTCAGGTGGAGAACAAGCAAAATTACGTTTTGCTAAACTAA
TGAATACCGAATCAAATATTCTCATCTTGGATGAACCAACCAATCATTTGGACGTGGACGCTAAAGAAGAACTCAAGCGT
GCACTTATTGAATATCCGGGAACTGTTTTGATGGTTTCACATGAACCAGAATTTTATGAAGGTCTAGTTTCTGATGTCAT
TAACTGTGAAGAATGGACAACTCGTATTTTGTAA

Upstream 100 bases:

>100_bases
ATAAAGAAGCTTTTGAAAATGGCATTGCTGATTTATCTGAAACAGACTTTTATAAGTATCCAAGATATTAAGAAATTTAG
AAAGATTTAAGAAATAAAAA

Downstream 100 bases:

>100_bases
TTACTGATTAATTCTTATGCTAGTTCATCTCTAATTTTTCTTAAAAATTGGTAGTTGACCTGCAGTTATACTAGCTTGCA
CAAACACAAGAAATGGTTTG

Product: ABC transporter ATP binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 517; Mature: 516

Protein sequence:

>517_residues
MSILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKSTFMNIITGTLVPDEGKVIWSKKHRVGYMDQHAVLGKG
KTTREALAEAFQYLFDIEAQINDTYMKMAEMSEDEMNAALENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVA
ELSGGQRTKILLGKLLLEKPDILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDVPFMDEVVNIIYHVHGLGITRYS
MGYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIARKKANVATSGQAKAREKKLAKMEIVETISEKPKPHFDFKFSRKP
SRLVFEAKDLVIGYNEPLSSEINLKVESGQKIAFIGSNGIGKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYEQEIKNPSQ
KTVLDDLWDEYPSWNQAELRGALARVGLTAKQIESRVYVLSGGEQAKLRFAKLMNTESNILILDEPTNHLDVDAKEELKR
ALIEYPGTVLMVSHEPEFYEGLVSDVINCEEWTTRIL

Sequences:

>Translated_517_residues
MSILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKSTFMNIITGTLVPDEGKVIWSKKHRVGYMDQHAVLGKG
KTTREALAEAFQYLFDIEAQINDTYMKMAEMSEDEMNAALENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVA
ELSGGQRTKILLGKLLLEKPDILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDVPFMDEVVNIIYHVHGLGITRYS
MGYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIARKKANVATSGQAKAREKKLAKMEIVETISEKPKPHFDFKFSRKP
SRLVFEAKDLVIGYNEPLSSEINLKVESGQKIAFIGSNGIGKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYEQEIKNPSQ
KTVLDDLWDEYPSWNQAELRGALARVGLTAKQIESRVYVLSGGEQAKLRFAKLMNTESNILILDEPTNHLDVDAKEELKR
ALIEYPGTVLMVSHEPEFYEGLVSDVINCEEWTTRIL
>Mature_516_residues
SILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKSTFMNIITGTLVPDEGKVIWSKKHRVGYMDQHAVLGKGK
TTREALAEAFQYLFDIEAQINDTYMKMAEMSEDEMNAALENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVAE
LSGGQRTKILLGKLLLEKPDILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDVPFMDEVVNIIYHVHGLGITRYSM
GYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIARKKANVATSGQAKAREKKLAKMEIVETISEKPKPHFDFKFSRKPS
RLVFEAKDLVIGYNEPLSSEINLKVESGQKIAFIGSNGIGKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYEQEIKNPSQK
TVLDDLWDEYPSWNQAELRGALARVGLTAKQIESRVYVLSGGEQAKLRFAKLMNTESNILILDEPTNHLDVDAKEELKRA
LIEYPGTVLMVSHEPEFYEGLVSDVINCEEWTTRIL

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI148612853, Length=518, Percent_Identity=28.3783783783784, Blast_Score=197, Evalue=3e-50,
Organism=Homo sapiens, GI27881506, Length=525, Percent_Identity=28.1904761904762, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI10947137, Length=525, Percent_Identity=28.1904761904762, Blast_Score=183, Evalue=4e-46,
Organism=Homo sapiens, GI10947135, Length=524, Percent_Identity=27.8625954198473, Blast_Score=170, Evalue=2e-42,
Organism=Homo sapiens, GI69354671, Length=524, Percent_Identity=27.8625954198473, Blast_Score=170, Evalue=3e-42,
Organism=Escherichia coli, GI1787041, Length=513, Percent_Identity=33.3333333333333, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1789751, Length=511, Percent_Identity=29.5499021526419, Blast_Score=226, Evalue=4e-60,
Organism=Escherichia coli, GI2367384, Length=517, Percent_Identity=29.2069632495164, Blast_Score=210, Evalue=2e-55,
Organism=Escherichia coli, GI1787182, Length=516, Percent_Identity=29.4573643410853, Blast_Score=201, Evalue=7e-53,
Organism=Escherichia coli, GI1788165, Length=288, Percent_Identity=25.3472222222222, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1789891, Length=252, Percent_Identity=25.7936507936508, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI48994943, Length=235, Percent_Identity=30.6382978723404, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994883, Length=234, Percent_Identity=28.6324786324786, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI87081782, Length=226, Percent_Identity=26.5486725663717, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1787758, Length=170, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI87081709, Length=221, Percent_Identity=22.6244343891403, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=233, Percent_Identity=26.1802575107296, Blast_Score=66, Evalue=6e-12,
Organism=Escherichia coli, GI1789593, Length=233, Percent_Identity=24.4635193133047, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI1788225, Length=231, Percent_Identity=22.9437229437229, Blast_Score=64, Evalue=2e-11,
Organism=Escherichia coli, GI1790190, Length=203, Percent_Identity=27.5862068965517, Blast_Score=63, Evalue=4e-11,
Organism=Escherichia coli, GI1787112, Length=225, Percent_Identity=28.8888888888889, Blast_Score=63, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=518, Percent_Identity=27.992277992278, Blast_Score=205, Evalue=4e-53,
Organism=Caenorhabditis elegans, GI17553372, Length=501, Percent_Identity=30.938123752495, Blast_Score=194, Evalue=8e-50,
Organism=Caenorhabditis elegans, GI17559834, Length=530, Percent_Identity=26.9811320754717, Blast_Score=175, Evalue=6e-44,
Organism=Caenorhabditis elegans, GI115534520, Length=237, Percent_Identity=24.8945147679325, Blast_Score=69, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6321121, Length=528, Percent_Identity=29.7348484848485, Blast_Score=206, Evalue=9e-54,
Organism=Saccharomyces cerevisiae, GI6320874, Length=526, Percent_Identity=28.8973384030418, Blast_Score=192, Evalue=1e-49,
Organism=Saccharomyces cerevisiae, GI6324314, Length=410, Percent_Identity=26.0975609756098, Blast_Score=109, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6325030, Length=400, Percent_Identity=29, Blast_Score=109, Evalue=9e-25,
Organism=Saccharomyces cerevisiae, GI6323278, Length=419, Percent_Identity=25.7756563245823, Blast_Score=105, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666836, Length=524, Percent_Identity=28.4351145038168, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24642252, Length=523, Percent_Identity=28.1070745697897, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI18859989, Length=523, Percent_Identity=28.1070745697897, Blast_Score=195, Evalue=6e-50,
Organism=Drosophila melanogaster, GI24641342, Length=527, Percent_Identity=25.9962049335863, Blast_Score=167, Evalue=1e-41,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 58361; Mature: 58230

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKSTFMNIITGTLVPDEGKV
CCCEECCCCCCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
IWSKKHRVGYMDQHAVLGKGKTTREALAEAFQYLFDIEAQINDTYMKMAEMSEDEMNAAL
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVAELSGGQRTKILLGKLLLEKP
HHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCC
DILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDVPFMDEVVNIIYHVHGLGITRYS
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
MGYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIARKKANVATSGQAKAREKKLAKMEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
VETISEKPKPHFDFKFSRKPSRLVFEAKDLVIGYNEPLSSEINLKVESGQKIAFIGSNGI
HHHHHHCCCCCCCEEECCCCCCEEEEECCEEEECCCCCCCCEEEEEECCCEEEEEECCCC
GKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYEQEIKNPSQKTVLDDLWDEYPSWNQAELR
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
GALARVGLTAKQIESRVYVLSGGEQAKLRFAKLMNTESNILILDEPTNHLDVDAKEELKR
HHHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
ALIEYPGTVLMVSHEPEFYEGLVSDVINCEEWTTRIL
HHHHCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure 
SILNVKNLSHGFGDRAIFEDVSFRLLKGEHIGFVGANGEGKSTFMNIITGTLVPDEGKV
CCEECCCCCCCCCCHHHHHHHHHEEECCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCE
IWSKKHRVGYMDQHAVLGKGKTTREALAEAFQYLFDIEAQINDTYMKMAEMSEDEMNAAL
EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
ENVGELQEELDNSDFYLIDAKVEETARGLGLTPLLDKDVAELSGGQRTKILLGKLLLEKP
HHHHHHHHHHCCCCEEEEECCHHHHHCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCC
DILLLDEPTNYLDEEHILWLKNYLKNYENAFILISHDVPFMDEVVNIIYHVHGLGITRYS
CEEEEECCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
MGYAEFERVFEEKKAQLESLHNAQVAEQAKLKDFIARKKANVATSGQAKAREKKLAKMEI
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
VETISEKPKPHFDFKFSRKPSRLVFEAKDLVIGYNEPLSSEINLKVESGQKIAFIGSNGI
HHHHHHCCCCCCCEEECCCCCCEEEEECCEEEECCCCCCCCEEEEEECCCEEEEEECCCC
GKSTLLKSLMGLIPSLDGEVEKGNFQDIAYYEQEIKNPSQKTVLDDLWDEYPSWNQAELR
CHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHH
GALARVGLTAKQIESRVYVLSGGEQAKLRFAKLMNTESNILILDEPTNHLDVDAKEELKR
HHHHHHCCCHHHHCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHH
ALIEYPGTVLMVSHEPEFYEGLVSDVINCEEWTTRIL
HHHHCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9272861; 9384377 [H]