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The map label for this gene is yabA

Identifier: 15671987

GI number: 15671987

Start: 10280

End: 10837

Strand: Reverse

Name: yabA

Synonym: L10283

Alternate gene names: NA

Gene position: 10837-10280 (Counterclockwise)

Preceding gene: 15672007

Following gene: NA

Centisome position: 0.46

GC content: 35.13

Gene sequence:

>558_bases
ATGCTCGGAGAAAATTTACAAAAAGCTCGTCTTGCCCAGAAGCTCACACAAGAAGAAGTTGCAAAAGAACTTTATTTTAG
TAGACAAGCCATTTCACGTTGGGAATCCAATAAAACTGAACCAAATTTTGAAACATTGATTGCCCTAGCCGAATTATATG
AATCAGATTTATCAGCTTTTGCTCAAGGAATTGAACCACAAAAAAGAAAGAAACATATCAACCTCTTTGCTGGTTTTGGC
TTAGTCTTTTTTAACTTCGTTCTTGGTTTCTGGTTGATAATTACTACTGCTTTGATTCTTTTGGCTCTCTATGCTATTAT
ATTAGCTTTATTCCTTGCTCCATTTATTATGATTTTCGCTGTTGCTACTCATAACCCACATATTACTTTTGGGAATGCGA
ATGGAGCAACAGGTTTTGACTGGTGGTACTGGTTAGTTGCGATTATCGCTTGTTCGCTGATGGTTCTTGTTAGCCCTTTG
ATTTGGCGATTTACAAAGTTACTTTACTTTTGGCTTATTAAATACCTCAAATTTAATCTCAAATCGGTTTATAATTAA

Upstream 100 bases:

>100_bases
CCTAAAATACCACCTATGTTCTTGCTTTTAACTTCGCTTTAGTTGATAATGAAATCAGAAACAAATCACTAAATCACCCA
TTTAAATTTAAGGAGAAAAA

Downstream 100 bases:

>100_bases
AAAAAGGGCTCACTTGAGCACCTTTTTTATTTTTTTATTAAAGTCAAAACGACTCATCATCACTTCATGATTGCAGTTTG
TACATCTTATCTTGATATCT

Product: transcription regulator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator

Number of amino acids: Translated: 185; Mature: 185

Protein sequence:

>185_residues
MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFETLIALAELYESDLSAFAQGIEPQKRKKHINLFAGFG
LVFFNFVLGFWLIITTALILLALYAIILALFLAPFIMIFAVATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPL
IWRFTKLLYFWLIKYLKFNLKSVYN

Sequences:

>Translated_185_residues
MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFETLIALAELYESDLSAFAQGIEPQKRKKHINLFAGFG
LVFFNFVLGFWLIITTALILLALYAIILALFLAPFIMIFAVATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPL
IWRFTKLLYFWLIKYLKFNLKSVYN
>Mature_185_residues
MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFETLIALAELYESDLSAFAQGIEPQKRKKHINLFAGFG
LVFFNFVLGFWLIITTALILLALYAIILALFLAPFIMIFAVATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPL
IWRFTKLLYFWLIKYLKFNLKSVYN

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21351; Mature: 21351

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFETLIALAELYESDLSAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AQGIEPQKRKKHINLFAGFGLVFFNFVLGFWLIITTALILLALYAIILALFLAPFIMIFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPLIWRFTKLLYFWLIKYLKFNL
HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVYN
HHHCC
>Mature Secondary Structure
MLGENLQKARLAQKLTQEEVAKELYFSRQAISRWESNKTEPNFETLIALAELYESDLSAF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
AQGIEPQKRKKHINLFAGFGLVFFNFVLGFWLIITTALILLALYAIILALFLAPFIMIFA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VATHNPHITFGNANGATGFDWWYWLVAIIACSLMVLVSPLIWRFTKLLYFWLIKYLKFNL
HHCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVYN
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA