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The map label for this gene is flpD [H]

Identifier: 15669893

GI number: 15669893

Start: 1131591

End: 1131995

Strand: Direct

Name: flpD [H]

Synonym: MJ1190a

Alternate gene names: 15669893

Gene position: 1131591-1131995 (Clockwise)

Preceding gene: 15669377

Following gene: 15669379

Centisome position: 67.96

GC content: 44.2

Gene sequence:

>405_bases
ATGGATCCAGTAATAATTGCATTTTGTTGCTATCAGTGAGGATATGGGGCTGCTGACTTGGCAGGGACAAGTAGAATGCA
ATACCCTGCAACCGTAAGAATCGTAAGGCTCCCTTGTACCGGTAAATTCGATATTACCTACGCTTTAAGGGCTTTCCAAA
AGGGAGCCGATGCGGTTATGGTTGTAGGGTGAAAGAAAGGAGAGTGTGCCTACGAAACAGGTAACTTAAAGGCTGAGGAG
AGGGTTAGGTTCGCTAAACAATTATTAGATGAATTAGGAATTGGCGGAGACAGAATTGACATGTTTTTCATGTCTGCCGC
TGAGGCAGATAAATTCGTCTCCGCCGTTAATGAAATGACTGCAAGAGTTGAAAAACTCGGACCTAACCCTCTCAAAGCTC
AGTAA

Upstream 100 bases:

>100_bases
CTGATGGAGAGGGTAAGTGCCCTCATCCAAATTAAATTATAAATTTAATTCTCATGTTGTTATCGAGTTTATAAAATTAA
TAATATATAGGGGGATTAGT

Downstream 100 bases:

>100_bases
AGCCGGAGATTAAAGGGATGAGTTCTCTCGGGAACCCGTCAAGGGACCGAGAGAACAACCGCCCCATAAGTAAGGGGTTC
TCCGGCATTGCAAAACTAAT

Product: coenzyme F420-reducing hydrogenase subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 134; Mature: 134

Protein sequence:

>134_residues
MDPVIIAFCCYQXGYGAADLAGTSRMQYPATVRIVRLPCTGKFDITYALRAFQKGADAVMVVGXKKGECAYETGNLKAEE
RVRFAKQLLDELGIGGDRIDMFFMSAAEADKFVSAVNEMTARVEKLGPNPLKAQ

Sequences:

>Translated_134_residues
MDPVIIAFCCYQ*GYGAADLAGTSRMQYPATVRIVRLPCTGKFDITYALRAFQKGADAVMVVG*KKGECAYETGNLKAEE
RVRFAKQLLDELGIGGDRIDMFFMSAAEADKFVSAVNEMTARVEKLGPNPLKAQ
>Mature_134_residues
MDPVIIAFCCYQ*GYGAADLAGTSRMQYPATVRIVRLPCTGKFDITYALRAFQKGADAVMVVG*KKGECAYETGNLKAEE
RVRFAKQLLDELGIGGDRIDMFFMSAAEADKFVSAVNEMTARVEKLGPNPLKAQ

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 14374; Mature: 14374

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVIIAFCCYQGYGAADLAGTSRMQYPATVRIVRLPCTGKFDITYALRAFQKGADAVMV
CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
VGKKGECAYETGNLKAEERVRFAKQLLDELGIGGDRIDMFFMSAAEADKFVSAVNEMTAR
EECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEKLGPNPLKAQ
HHHCCCCCCCCC
>Mature Secondary Structure
MDPVIIAFCCYQGYGAADLAGTSRMQYPATVRIVRLPCTGKFDITYALRAFQKGADAVMV
CCCEEEEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCCEEEE
VGKKGECAYETGNLKAEERVRFAKQLLDELGIGGDRIDMFFMSAAEADKFVSAVNEMTAR
EECCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VEKLGPNPLKAQ
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]