| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669864
Identifier: 15669864
GI number: 15669864
Start: 1651185
End: 1652315
Strand: Reverse
Name: 15669864
Synonym: MJ1668
Alternate gene names: NA
Gene position: 1652315-1651185 (Counterclockwise)
Preceding gene: 15669865
Following gene: 15669863
Centisome position: 99.24
GC content: 26.88
Gene sequence:
>1131_bases ATGAAAATGGTTGTATTGAAACCAAAAATAAACAGTAAATTTCATTTTGGGGAAGGAAGTTTGGAAAGAAACAGTAAAAT TTTTCATTCAAATAGTTTGTTTTCTGCAATAGTGAATAATTACATTAAGCTATATGGAAGGGAAGATTTAGAGAAAAATA TAGAAAAAATAAAGAATATTAGATTATCATCCCTATTGTATAAAATAAAGAACATCTACCTAATTCCAAAACCAGAACAT CCAGAATTTTATAAATTAAAGGGAAATCCTGGAATTAAACCAAAAGACATTAAAAAAATTCAGTTTTTCTCAATAAAGGC ATATAAGGAATTATTAGATAATGAGTTGGATTGGAAGAATAAAATAAAGCATATTGTTGATTATCAGACAATAAATAAGA GCATTGTTATTTCTGAAAAGGAAATTGAAGAAATAAAAAGAATTTTTGGTATAAAAGCAGAGAAACTTAAACATGCAAAA ATTAGCTTAATATCAAAACATTTAGAGCAAAAAGTTGCTATAGATAGGTTAAAAGACATTACATTAGAAAAAGATGACAA AGGGCAACTCTACAACATCGAATTTATAAAACTAAATGAAAATGTTGAGTTCTATTTCTTAATTGATTACAACAATGAAG ATAAAGAATTTATCAAAAAATTAGAGGCATCAATAAAATTAATAGAAGATGAAGGTTTAGGGGGAAAAAGAAGTATTGGA GCAGGATTTTTTGAGAAGGTTGAGATAGTTGATTTACCAGAGGATTTTAATGAAATATTGGATGAAAATTCAAAATACAA CAATCTAGAATATAAAATGCTCTTGGGAGTTGGAATTCCTAATAAAGATGATATAAAAAATATTGAATATTACAAATTAA TTGAAATTGGTGGCTATATATACTCATTGGAATGTTTAACAAAGCCAAAAAGGAATATTTTAGCTTTAACTGAGGGCTCA ATTGTGAAAAATGACTTTATAGGGGATGTTAAAGACATATCCCCTCAAAATGATGATGACGAGCAGAATAAGAATAATGA AAACAACAATAAACTTAATCATAAGGTCTATACCCATGGAAAACCAATATTACTCCCATTTAATCCAAAGAGGGATAACT ATGGAAGTTAA
Upstream 100 bases:
>100_bases GTTAGAAAGTGAATTAGATAAAATTTGGGGAGGGATTAATTTTAACTAACAGTTTTAATTAATTTTAATTTTTAACTAAA CTTTTTTATGGTGGGCAGAG
Downstream 100 bases:
>100_bases ATGTGAATTAATAACTCCAATTTTCATTGGTTGTGGGGAGGAATACAGTCAATTAGATTATTTTATAGAAGATGGATTAG CTCATATAATTGATTTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 376; Mature: 376
Protein sequence:
>376_residues MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS
Sequences:
>Translated_376_residues MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS >Mature_376_residues MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS
Specific function: Unknown
COG id: COG1567
COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1668_METJA (Q59062)
Other databases:
- EMBL: L77117 - PIR: B64508 - RefSeq: NP_248678.1 - ProteinModelPortal: Q59062 - GeneID: 1452577 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1668 - NMPDR: fig|243232.1.peg.1715 - TIGR: MJ1668 - HOGENOM: HBG540944 - OMA: FFSIKAY - ProtClustDB: CLSK796967 - BioCyc: MJAN243232:MJ_1668-MONOMER - InterPro: IPR005510 - TIGRFAMs: TIGR01903
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43851; Mature: 43851
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNI CEEEEEECCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH RLSSLLYKIKNIYLIPKPEHPEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKN HHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCHHH KIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAKISLISKHLEQKVAIDRLKDI HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG CCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCC AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYI CCCHHEEEEEECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCEE YSLECLTKPKRNILALTEGSIVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHG EEEEECCCCCCCEEEEECCCEECCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCCEEEECC KPILLPFNPKRDNYGS CEEEEECCCCCCCCCC >Mature Secondary Structure MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNI CEEEEEECCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH RLSSLLYKIKNIYLIPKPEHPEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKN HHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCHHH KIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAKISLISKHLEQKVAIDRLKDI HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC TLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG CCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCC AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYI CCCHHEEEEEECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCEE YSLECLTKPKRNILALTEGSIVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHG EEEEECCCCCCCEEEEECCCEECCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCCEEEECC KPILLPFNPKRDNYGS CEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087