Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669864

Identifier: 15669864

GI number: 15669864

Start: 1651185

End: 1652315

Strand: Reverse

Name: 15669864

Synonym: MJ1668

Alternate gene names: NA

Gene position: 1652315-1651185 (Counterclockwise)

Preceding gene: 15669865

Following gene: 15669863

Centisome position: 99.24

GC content: 26.88

Gene sequence:

>1131_bases
ATGAAAATGGTTGTATTGAAACCAAAAATAAACAGTAAATTTCATTTTGGGGAAGGAAGTTTGGAAAGAAACAGTAAAAT
TTTTCATTCAAATAGTTTGTTTTCTGCAATAGTGAATAATTACATTAAGCTATATGGAAGGGAAGATTTAGAGAAAAATA
TAGAAAAAATAAAGAATATTAGATTATCATCCCTATTGTATAAAATAAAGAACATCTACCTAATTCCAAAACCAGAACAT
CCAGAATTTTATAAATTAAAGGGAAATCCTGGAATTAAACCAAAAGACATTAAAAAAATTCAGTTTTTCTCAATAAAGGC
ATATAAGGAATTATTAGATAATGAGTTGGATTGGAAGAATAAAATAAAGCATATTGTTGATTATCAGACAATAAATAAGA
GCATTGTTATTTCTGAAAAGGAAATTGAAGAAATAAAAAGAATTTTTGGTATAAAAGCAGAGAAACTTAAACATGCAAAA
ATTAGCTTAATATCAAAACATTTAGAGCAAAAAGTTGCTATAGATAGGTTAAAAGACATTACATTAGAAAAAGATGACAA
AGGGCAACTCTACAACATCGAATTTATAAAACTAAATGAAAATGTTGAGTTCTATTTCTTAATTGATTACAACAATGAAG
ATAAAGAATTTATCAAAAAATTAGAGGCATCAATAAAATTAATAGAAGATGAAGGTTTAGGGGGAAAAAGAAGTATTGGA
GCAGGATTTTTTGAGAAGGTTGAGATAGTTGATTTACCAGAGGATTTTAATGAAATATTGGATGAAAATTCAAAATACAA
CAATCTAGAATATAAAATGCTCTTGGGAGTTGGAATTCCTAATAAAGATGATATAAAAAATATTGAATATTACAAATTAA
TTGAAATTGGTGGCTATATATACTCATTGGAATGTTTAACAAAGCCAAAAAGGAATATTTTAGCTTTAACTGAGGGCTCA
ATTGTGAAAAATGACTTTATAGGGGATGTTAAAGACATATCCCCTCAAAATGATGATGACGAGCAGAATAAGAATAATGA
AAACAACAATAAACTTAATCATAAGGTCTATACCCATGGAAAACCAATATTACTCCCATTTAATCCAAAGAGGGATAACT
ATGGAAGTTAA

Upstream 100 bases:

>100_bases
GTTAGAAAGTGAATTAGATAAAATTTGGGGAGGGATTAATTTTAACTAACAGTTTTAATTAATTTTAATTTTTAACTAAA
CTTTTTTATGGTGGGCAGAG

Downstream 100 bases:

>100_bases
ATGTGAATTAATAACTCCAATTTTCATTGGTTGTGGGGAGGAATACAGTCAATTAGATTATTTTATAGAAGATGGATTAG
CTCATATAATTGATTTGGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 376; Mature: 376

Protein sequence:

>376_residues
MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH
PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK
ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG
AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS
IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS

Sequences:

>Translated_376_residues
MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH
PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK
ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG
AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS
IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS
>Mature_376_residues
MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNIRLSSLLYKIKNIYLIPKPEH
PEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKNKIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAK
ISLISKHLEQKVAIDRLKDITLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG
AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYIYSLECLTKPKRNILALTEGS
IVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHGKPILLPFNPKRDNYGS

Specific function: Unknown

COG id: COG1567

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1668_METJA (Q59062)

Other databases:

- EMBL:   L77117
- PIR:   B64508
- RefSeq:   NP_248678.1
- ProteinModelPortal:   Q59062
- GeneID:   1452577
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1668
- NMPDR:   fig|243232.1.peg.1715
- TIGR:   MJ1668
- HOGENOM:   HBG540944
- OMA:   FFSIKAY
- ProtClustDB:   CLSK796967
- BioCyc:   MJAN243232:MJ_1668-MONOMER
- InterPro:   IPR005510
- TIGRFAMs:   TIGR01903

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43851; Mature: 43851

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNI
CEEEEEECCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RLSSLLYKIKNIYLIPKPEHPEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKN
HHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCHHH
KIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAKISLISKHLEQKVAIDRLKDI
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG
CCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCC
AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYI
CCCHHEEEEEECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCEE
YSLECLTKPKRNILALTEGSIVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHG
EEEEECCCCCCCEEEEECCCEECCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCCEEEECC
KPILLPFNPKRDNYGS
CEEEEECCCCCCCCCC
>Mature Secondary Structure
MKMVVLKPKINSKFHFGEGSLERNSKIFHSNSLFSAIVNNYIKLYGREDLEKNIEKIKNI
CEEEEEECCCCCEEECCCCCCCCCCEEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
RLSSLLYKIKNIYLIPKPEHPEFYKLKGNPGIKPKDIKKIQFFSIKAYKELLDNELDWKN
HHHHHHHHHHCEEEEECCCCCCEEEECCCCCCCCCCCCEEEEEEHHHHHHHHCCCCCHHH
KIKHIVDYQTINKSIVISEKEIEEIKRIFGIKAEKLKHAKISLISKHLEQKVAIDRLKDI
HHHHHHHHHHCCCEEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
TLEKDDKGQLYNIEFIKLNENVEFYFLIDYNNEDKEFIKKLEASIKLIEDEGLGGKRSIG
CCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCHHHHHHHHHHHEEEEECCCCCCCCCCC
AGFFEKVEIVDLPEDFNEILDENSKYNNLEYKMLLGVGIPNKDDIKNIEYYKLIEIGGYI
CCCHHEEEEEECCHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCEE
YSLECLTKPKRNILALTEGSIVKNDFIGDVKDISPQNDDDEQNKNNENNNKLNHKVYTHG
EEEEECCCCCCCEEEEECCCEECCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCCEEEECC
KPILLPFNPKRDNYGS
CEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087