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The map label for this gene is 15669822

Identifier: 15669822

GI number: 15669822

Start: 1602206

End: 1604221

Strand: Direct

Name: 15669822

Synonym: MJ1625

Alternate gene names: NA

Gene position: 1602206-1604221 (Clockwise)

Preceding gene: 15669819

Following gene: 15669827

Centisome position: 96.23

GC content: 31.15

Gene sequence:

>2016_bases
ATGAAGAGTGAGATAACTAATGTTGATGTGTGCTGTGTTGTGGATGAATTACAAAACCTCATTAACGGTAGATTAGATAA
AGCGTTTTTGATTGATAATGAGCAAAACAGAGAGTTGATATTAAAAATCCATGTTCCTGAGGGCGGGAGTAGAGAGCTTG
TTATAAGCATTGGTAAATATAAGTATATAACTTTAACAAATTATGAGAGGGAAAAACCAAAACTTCCACCCTCTTTTGCC
ATGTTATTAAGAAAATATTTAAAAAATGCCAAATTAATAAAAATTGAGCAGGTAAATTTTGATAGAGTAGTTATTTTCCA
CTTTGAAACAAGAGATGGGATTTATAAATTGGTTGCTGAGCTGTTTGGGGATGGAAATATCATATTTTTAAATAATGAGG
ATACAATTATAGCTCCGCTTAGGGTTGAGAGATGGAGTACGAGAAATATAGTCCCTAAGGAAAAATACAAATTCCCTCCA
CAAAAGCCACTAAATCCATATAATTTAGAGTTTTCTATCGCCTATGAGGTTTTTAAAGATTATTTCTTGAATAATAAAGG
GGTTGAATGCGTTAGATTAATATCAAGAGTCTTTGGTATTGGAGGACTTTACGCTGAAGAGATTTGTGAAAGAGCTGAAA
TAGACAAGAAAAAGAGAGATTTAAGTGAAGAAGAAATTAAAAAGCTCTTTGAAGCTTCTAAAAATCTATTTGATGAAATT
TTTAACAATAGAAAGCCACAGATTGTTTTAAAGGATAATGAATACTTTGACGTTGTGCCTATTGATTTAAAAAAATACAA
AGGTTTAGAGAAAAAGTACTATAACAGCTTTTTAGAGGCTGTTGATGACTACTTTGCCAAATTTTTAACAAAAGTTGTAG
TTAAAAAAGAAAAATCAAAAATTGAGAAAGAAATTGAGAGACAAGAAAATATATTGAGAAGGCAGTTAGAGACATTGAAG
AAGTATAAAGAAGATGCAGAGAAAAACCAAATTAAAGGGGATTTAATTTATGCAAACTATCAAATTGTTGAAGAATTGCT
GAATGCTATAAGGCAGGCAAGAGAAAAAATGGATTGGGCAAGAATAAAAAAGATAATTAGAGAAAATAAAGAGCATCCAA
TTTTAGGATTGATTGAAAATATAAATGAAAATATTGGAGAGATAATTATTAGATTAAAATCTGAGGTTGATGATAAAGTT
ATAGAAGAAAGAGTTTCTTTAGATATAAGAAAAAATGCATTTGAAAATGCTGAAAGCTACTATGAAAAGGCTAAAAAGTT
GAGAAATAAAATTGAAGGAATAGAAAATGCTATTGAGCTAACTAAAAAGAAGATAGAAGAGCTTAAAAAGAAAGGAGAGG
AAGAGTTGAAAGAAAAAGAATCCATGCAGATGAAGAAAAAAATTAGGAAGGAAAGAAAGTGGTATGAGAAATTTAAATGG
ACTGTTATTAATGGATTCTTAGTTATTGCTGGAAAAGATGCAATAACAAACGAGATTATTATCAAAAAATATACTGATAA
AGATGATATTGTATTCCACGCAGATATCCAAGGGGCTCCATTCACAGTTATAAAAACTCAAGGTAAAGAGGTTGATGAAG
AGACATTGGAAGAGGTTGCTAAATTCTCCGTCTCTCATTCAAGGGCTTGGAAGCTTGGATATGGGGCTATAGATACCTAC
TGGGTTAAGCCAGAGCAGATATCAAAAACAGCTGAGAGTGGGGAATATTTAAAAAGAGGGGCATTTGTAATTAGAGGAGA
GAGGCATTATTATAGAAATACACCTTTAGAATTAGGTGTTGGAGTTATTGAATACGATGGAGATGTAAAAATAACAACAG
CACCTCCAAAAACTTTACAAAAGAGTTTTATTAAGTGGGTTTTATTAAAACCTTCAAATAAGGAGAAGGGAAAGGTTGTT
AAAGAGTTAAAAGAGATATTTAAAGATTACGGAATTGATGATGAAGATATTTTGAGAGTTCTTCCTCCCGGGGGATGCGA
AATAGTTAAAAAATAA

Upstream 100 bases:

>100_bases
ATATTTCCCCTGTCTTAAATACTTTAAAAACTCTTCCCTCTCCATATTATCACAATAATAAAATATCCTAAAGAAAAATA
TAATATTTTCTGGTGAGATT

Downstream 100 bases:

>100_bases
TTATTTATTTTCAACTAACTCAACTATAACTTTTTTTAATGAGTTTCCAAATGGACAGTTTATTTTCTCATTTAAAACCT
GTTTTATTTTGTATTTTTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 671; Mature: 671

Protein sequence:

>671_residues
MKSEITNVDVCCVVDELQNLINGRLDKAFLIDNEQNRELILKIHVPEGGSRELVISIGKYKYITLTNYEREKPKLPPSFA
MLLRKYLKNAKLIKIEQVNFDRVVIFHFETRDGIYKLVAELFGDGNIIFLNNEDTIIAPLRVERWSTRNIVPKEKYKFPP
QKPLNPYNLEFSIAYEVFKDYFLNNKGVECVRLISRVFGIGGLYAEEICERAEIDKKKRDLSEEEIKKLFEASKNLFDEI
FNNRKPQIVLKDNEYFDVVPIDLKKYKGLEKKYYNSFLEAVDDYFAKFLTKVVVKKEKSKIEKEIERQENILRRQLETLK
KYKEDAEKNQIKGDLIYANYQIVEELLNAIRQAREKMDWARIKKIIRENKEHPILGLIENINENIGEIIIRLKSEVDDKV
IEERVSLDIRKNAFENAESYYEKAKKLRNKIEGIENAIELTKKKIEELKKKGEEELKEKESMQMKKKIRKERKWYEKFKW
TVINGFLVIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVAKFSVSHSRAWKLGYGAIDTY
WVKPEQISKTAESGEYLKRGAFVIRGERHYYRNTPLELGVGVIEYDGDVKITTAPPKTLQKSFIKWVLLKPSNKEKGKVV
KELKEIFKDYGIDDEDILRVLPPGGCEIVKK

Sequences:

>Translated_671_residues
MKSEITNVDVCCVVDELQNLINGRLDKAFLIDNEQNRELILKIHVPEGGSRELVISIGKYKYITLTNYEREKPKLPPSFA
MLLRKYLKNAKLIKIEQVNFDRVVIFHFETRDGIYKLVAELFGDGNIIFLNNEDTIIAPLRVERWSTRNIVPKEKYKFPP
QKPLNPYNLEFSIAYEVFKDYFLNNKGVECVRLISRVFGIGGLYAEEICERAEIDKKKRDLSEEEIKKLFEASKNLFDEI
FNNRKPQIVLKDNEYFDVVPIDLKKYKGLEKKYYNSFLEAVDDYFAKFLTKVVVKKEKSKIEKEIERQENILRRQLETLK
KYKEDAEKNQIKGDLIYANYQIVEELLNAIRQAREKMDWARIKKIIRENKEHPILGLIENINENIGEIIIRLKSEVDDKV
IEERVSLDIRKNAFENAESYYEKAKKLRNKIEGIENAIELTKKKIEELKKKGEEELKEKESMQMKKKIRKERKWYEKFKW
TVINGFLVIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVAKFSVSHSRAWKLGYGAIDTY
WVKPEQISKTAESGEYLKRGAFVIRGERHYYRNTPLELGVGVIEYDGDVKITTAPPKTLQKSFIKWVLLKPSNKEKGKVV
KELKEIFKDYGIDDEDILRVLPPGGCEIVKK
>Mature_671_residues
MKSEITNVDVCCVVDELQNLINGRLDKAFLIDNEQNRELILKIHVPEGGSRELVISIGKYKYITLTNYEREKPKLPPSFA
MLLRKYLKNAKLIKIEQVNFDRVVIFHFETRDGIYKLVAELFGDGNIIFLNNEDTIIAPLRVERWSTRNIVPKEKYKFPP
QKPLNPYNLEFSIAYEVFKDYFLNNKGVECVRLISRVFGIGGLYAEEICERAEIDKKKRDLSEEEIKKLFEASKNLFDEI
FNNRKPQIVLKDNEYFDVVPIDLKKYKGLEKKYYNSFLEAVDDYFAKFLTKVVVKKEKSKIEKEIERQENILRRQLETLK
KYKEDAEKNQIKGDLIYANYQIVEELLNAIRQAREKMDWARIKKIIRENKEHPILGLIENINENIGEIIIRLKSEVDDKV
IEERVSLDIRKNAFENAESYYEKAKKLRNKIEGIENAIELTKKKIEELKKKGEEELKEKESMQMKKKIRKERKWYEKFKW
TVINGFLVIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVAKFSVSHSRAWKLGYGAIDTY
WVKPEQISKTAESGEYLKRGAFVIRGERHYYRNTPLELGVGVIEYDGDVKITTAPPKTLQKSFIKWVLLKPSNKEKGKVV
KELKEIFKDYGIDDEDILRVLPPGGCEIVKK

Specific function: Unknown

COG id: COG1293

COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI32130516, Length=683, Percent_Identity=24.597364568082, Blast_Score=179, Evalue=8e-45,
Organism=Caenorhabditis elegans, GI32565397, Length=644, Percent_Identity=27.4844720496894, Blast_Score=216, Evalue=2e-56,
Organism=Saccharomyces cerevisiae, GI6325248, Length=359, Percent_Identity=24.5125348189415, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281362530, Length=364, Percent_Identity=28.5714285714286, Blast_Score=148, Evalue=1e-35,
Organism=Drosophila melanogaster, GI281362528, Length=364, Percent_Identity=28.5714285714286, Blast_Score=148, Evalue=1e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1625_METJA (Q59020)

Other databases:

- EMBL:   L77117
- PIR:   H64502
- RefSeq:   NP_248636.1
- ProteinModelPortal:   Q59020
- GeneID:   1452535
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1625
- NMPDR:   fig|243232.1.peg.1673
- TIGR:   MJ1625
- HOGENOM:   HBG541443
- OMA:   HVKKPNG
- ProtClustDB:   CLSK876647
- BioCyc:   MJAN243232:MJ_1625-MONOMER
- InterPro:   IPR008532
- InterPro:   IPR008616
- InterPro:   IPR010979

Pfam domain/function: PF05670 DUF814; PF05833 FbpA; SSF46946 Ribosomal_H2TH

EC number: NA

Molecular weight: Translated: 78617; Mature: 78617

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEITNVDVCCVVDELQNLINGRLDKAFLIDNEQNRELILKIHVPEGGSRELVISIGKY
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEECCE
KYITLTNYEREKPKLPPSFAMLLRKYLKNAKLIKIEQVNFDRVVIFHFETRDGIYKLVAE
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCHHHHHHHH
LFGDGNIIFLNNEDTIIAPLRVERWSTRNIVPKEKYKFPPQKPLNPYNLEFSIAYEVFKD
HHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEEHHHHHHHH
YFLNNKGVECVRLISRVFGIGGLYAEEICERAEIDKKKRDLSEEEIKKLFEASKNLFDEI
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH
FNNRKPQIVLKDNEYFDVVPIDLKKYKGLEKKYYNSFLEAVDDYFAKFLTKVVVKKEKSK
HCCCCCEEEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKEIERQENILRRQLETLKKYKEDAEKNQIKGDLIYANYQIVEELLNAIRQAREKMDWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCHH
RIKKIIRENKEHPILGLIENINENIGEIIIRLKSEVDDKVIEERVSLDIRKNAFENAESY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKAKKLRNKIEGIENAIELTKKKIEELKKKGEEELKEKESMQMKKKIRKERKWYEKFKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCE
TVINGFLVIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVA
EEEEEEEEEECCCHHCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHH
KFSVSHSRAWKLGYGAIDTYWVKPEQISKTAESGEYLKRGAFVIRGERHYYRNTPLELGV
HHHCCCCCEEEECCCCCEEEECCHHHHHHHHHCCHHHHCCCEEEECCCHHHCCCCHHHCC
GVIEYDGDVKITTAPPKTLQKSFIKWVLLKPSNKEKGKVVKELKEIFKDYGIDDEDILRV
EEEEECCCEEEEECCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHEE
LPPGGCEIVKK
CCCCCCHHCCC
>Mature Secondary Structure
MKSEITNVDVCCVVDELQNLINGRLDKAFLIDNEQNRELILKIHVPEGGSRELVISIGKY
CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEEECCE
KYITLTNYEREKPKLPPSFAMLLRKYLKNAKLIKIEQVNFDRVVIFHFETRDGIYKLVAE
EEEEEECCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEECCCEEEEEEEECCCHHHHHHHH
LFGDGNIIFLNNEDTIIAPLRVERWSTRNIVPKEKYKFPPQKPLNPYNLEFSIAYEVFKD
HHCCCCEEEECCCCCEEEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCEEEEHHHHHHHH
YFLNNKGVECVRLISRVFGIGGLYAEEICERAEIDKKKRDLSEEEIKKLFEASKNLFDEI
HHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHH
FNNRKPQIVLKDNEYFDVVPIDLKKYKGLEKKYYNSFLEAVDDYFAKFLTKVVVKKEKSK
HCCCCCEEEEECCCEEEEEECCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEKEIERQENILRRQLETLKKYKEDAEKNQIKGDLIYANYQIVEELLNAIRQAREKMDWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHCCHH
RIKKIIRENKEHPILGLIENINENIGEIIIRLKSEVDDKVIEERVSLDIRKNAFENAESY
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKAKKLRNKIEGIENAIELTKKKIEELKKKGEEELKEKESMQMKKKIRKERKWYEKFKW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCE
TVINGFLVIAGKDAITNEIIIKKYTDKDDIVFHADIQGAPFTVIKTQGKEVDEETLEEVA
EEEEEEEEEECCCHHCCCEEEEEECCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHH
KFSVSHSRAWKLGYGAIDTYWVKPEQISKTAESGEYLKRGAFVIRGERHYYRNTPLELGV
HHHCCCCCEEEECCCCCEEEECCHHHHHHHHHCCHHHHCCCEEEECCCHHHCCCCHHHCC
GVIEYDGDVKITTAPPKTLQKSFIKWVLLKPSNKEKGKVVKELKEIFKDYGIDDEDILRV
EEEEECCCEEEEECCHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHCCCCHHHHHEE
LPPGGCEIVKK
CCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087