| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669785
Identifier: 15669785
GI number: 15669785
Start: 1561651
End: 1562376
Strand: Direct
Name: 15669785
Synonym: MJ1589
Alternate gene names: NA
Gene position: 1561651-1562376 (Clockwise)
Preceding gene: 15669784
Following gene: 15669786
Centisome position: 93.79
GC content: 27.27
Gene sequence:
>726_bases ATGATGATGGCATTGCAGATATTTATAAAGATACTTCCAATAATGTTTTTTGGAATTCTTTTAGCAAATCTTATGTGTCA TTTAAATATCTTATACAAACTTCAAAAATATATAAAAAATAAATACTTCCCAATAATTGCTGTCTTTTTTGTTAGTTCAA CATCAGGTAGCTTTTTATTAAAAAATTTATTAAAAAAAGGTGAAATTTCAGAAGAAAATCTTTTGCCAATTTACTTTTTA GGGATGTTTGTATTTGGAATCCACATAATTTTATTTTATGCTATACCAATGGCTACAAGTTTGGGTTGGTATGTTGGAGG CATCTATGTGCTAATAAAATTTTTGGTAACATGCAATTATTTGATTATAAGTGTTTTAATGCTTAAAAAAAGGAAATACA ATATTGATATTGAATTTAAATCTAAGTCAGAAGGTTTATATGGAGCTATAAGAGATACGTTTAAGCAGTATTTTAGAGTT TTAACATCATTTGTCCCATCTGTTTTGATAATAACTTATCTTATTGAGCATGGTTTATTGGATATTGTTGAGGATTTTGC TGGTTCTTTATTAAATGCTTTAAATTTATCTCCTACTATTTTAGTTATAGTGCTTACAGGGTTAGCTACAATTTCAGGGG CTATAGGTATTGCATCTGGACTTTTAGATGAAAATATACTGTCTCCAAATGAAGTTCTCTTTTCTTTATTTCTCGCAGGT TTTTAA
Upstream 100 bases:
>100_bases AGTTTCCGGATTTTTAGGTAATTATTACCTTAAAAAGAAAGCAAAGGAAAAAATGAAAGAAGTTTAATAGTTTTTTGCAA AAAACTATTAGTTTGAGAAC
Downstream 100 bases:
>100_bases ATAGAGTTGTTCTTTATTTGAGAAAGTATTTACCAATACAGCTCTCAATATTTGGAAAAATCGGGGCAAAGTTAGCTACT TTACATTTAATTGTTTATGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MMMALQIFIKILPIMFFGILLANLMCHLNILYKLQKYIKNKYFPIIAVFFVSSTSGSFLLKNLLKKGEISEENLLPIYFL GMFVFGIHIILFYAIPMATSLGWYVGGIYVLIKFLVTCNYLIISVLMLKKRKYNIDIEFKSKSEGLYGAIRDTFKQYFRV LTSFVPSVLIITYLIEHGLLDIVEDFAGSLLNALNLSPTILVIVLTGLATISGAIGIASGLLDENILSPNEVLFSLFLAG F
Sequences:
>Translated_241_residues MMMALQIFIKILPIMFFGILLANLMCHLNILYKLQKYIKNKYFPIIAVFFVSSTSGSFLLKNLLKKGEISEENLLPIYFL GMFVFGIHIILFYAIPMATSLGWYVGGIYVLIKFLVTCNYLIISVLMLKKRKYNIDIEFKSKSEGLYGAIRDTFKQYFRV LTSFVPSVLIITYLIEHGLLDIVEDFAGSLLNALNLSPTILVIVLTGLATISGAIGIASGLLDENILSPNEVLFSLFLAG F >Mature_241_residues MMMALQIFIKILPIMFFGILLANLMCHLNILYKLQKYIKNKYFPIIAVFFVSSTSGSFLLKNLLKKGEISEENLLPIYFL GMFVFGIHIILFYAIPMATSLGWYVGGIYVLIKFLVTCNYLIISVLMLKKRKYNIDIEFKSKSEGLYGAIRDTFKQYFRV LTSFVPSVLIITYLIEHGLLDIVEDFAGSLLNALNLSPTILVIVLTGLATISGAIGIASGLLDENILSPNEVLFSLFLAG F
Specific function: Unknown
COG id: COG3366
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0871, MJ0880 and MJ1556
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1589_METJA (Q58984)
Other databases:
- EMBL: L77117 - PIR: D64498 - RefSeq: NP_248598.1 - ProteinModelPortal: Q58984 - GeneID: 1452498 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1589 - NMPDR: fig|243232.1.peg.1635 - TIGR: MJ1589 - OMA: ITYLIEH - ProtClustDB: CLSK2517757 - BioCyc: MJAN243232:MJ_1589-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27083; Mature: 27083
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe2421e4)-; HASH(0xef9d024)-; HASH(0xe84e93c)-; HASH(0xe757fc4)-; HASH(0xec5e014)-; HASH(0xefdf484)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMMALQIFIKILPIMFFGILLANLMCHLNILYKLQKYIKNKYFPIIAVFFVSSTSGSFLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH KNLLKKGEISEENLLPIYFLGMFVFGIHIILFYAIPMATSLGWYVGGIYVLIKFLVTCNY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIISVLMLKKRKYNIDIEFKSKSEGLYGAIRDTFKQYFRVLTSFVPSVLIITYLIEHGLL HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVEDFAGSLLNALNLSPTILVIVLTGLATISGAIGIASGLLDENILSPNEVLFSLFLAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC F H >Mature Secondary Structure MMMALQIFIKILPIMFFGILLANLMCHLNILYKLQKYIKNKYFPIIAVFFVSSTSGSFLL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHH KNLLKKGEISEENLLPIYFLGMFVFGIHIILFYAIPMATSLGWYVGGIYVLIKFLVTCNY HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIISVLMLKKRKYNIDIEFKSKSEGLYGAIRDTFKQYFRVLTSFVPSVLIITYLIEHGLL HHHHHHHHHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DIVEDFAGSLLNALNLSPTILVIVLTGLATISGAIGIASGLLDENILSPNEVLFSLFLAG HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC F H
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087