| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is yjeF [C]
Identifier: 15669782
GI number: 15669782
Start: 1559214
End: 1560689
Strand: Direct
Name: yjeF [C]
Synonym: MJ1586
Alternate gene names: 15669782
Gene position: 1559214-1560689 (Clockwise)
Preceding gene: 15669779
Following gene: 15669783
Centisome position: 93.65
GC content: 31.71
Gene sequence:
>1476_bases GTGAGAAGGGATATTAATAATTTCCTATTTGGTGAGAGAATGGAGTTATTTGAAATATTAAAACAAAAAATTAAAGAAAA AGAGGTTATAACACCAAAGGAAATGGCAATTATTGATGATAATGCAGAGTTTTTGGGAATTCAAAAAATATTATTAATGG AGAATGCTGGAAAGGCAGTTTATGAAGAGATTAAGGATATTGATGCTGAGGAATTTATCATTTTCTGTGGAACTGGAAAT AACGGAGGAGATGGGTTTGTTGTAGCAAGACATCTTGGAAAGGGAGATGTTATATTAATAGGAAAAGAGTCAGAGATAAA AACCTACGAGGCAAGAGAAAACTTTAAGATACTAAAAAATTTGGCAGAGTTTGGAAATATAAGGATTAGAGAAATTAAAT GGGCTGAGGAAGTTAATGATATATTTGAAAGGCTAAAAAATAAAAAGGCAGTTATTATAGATGCAATGATTGGAACTGGT GTTAAAGGAGAGCTAAGAGAGCCATTTAAAACCATAGTTGATAAAATAAACGAGTTAAAGCAAATAAACAAAAATATCTT TGTTATAAGTGTAGATGTTGAGACAGGGCATTTAGAAAGCGATTTAACTATAACTTTCCACAAGAGAAAGACTATAAACA AAGACAACGCCATTGTAAAAAAGATTGGCATTCCTAAGGAGGCAGAATACATAGTTGGCTGGGGAGATTTAAAAGCTCTA AGGAAGAGAGATAGCAATAGCCACAAAGGGCAAAATGGAAAAGTTTTGATTATTGGAGGTAGTAAAGATTTTTATGGAGC TCCAATATTGGCTGGTTTGGCAGCATTAAAAATTGTTGATTTGGTGGGGATTTTGTCAGTCGGTAAGGTTATAGATAAAG TAAATCATCCAGAGTTTATTATGTATAGGGTTGAAGGGGATTATTTAAGCTCTCAACATGTTGATTATACTCTAGAAATT GCTAAAAAGTATGATGTTGTTGTTCTTGGTAATGGCTTAGGAGCCAACAATAGAACTAAAGCATTTTTAAATGAGTTCTT AGCAAAATATGATGGAAAAGTGGTTATTGATGCTGATGCAATTAAAGTTATTGATTATAATAACTTTGAATTCTCTGAGA ATTATATTTTCACTCCTCACAAAAGAGAGTTTGAATATATGGGGATTGATTTAGATAACATTGAAAATATAAAATCAACG ATTGTGTTAAAAGGGAAATATGATATAATATTTAATGCCAACAATCTAAAAATAAACAAAACTGGAAATGCTGGTTTGAC AAAGGGAGGAACTGGAGATGTTTTAGCTGGTTTAATTGGGGCTTTATTTGCTGTTAATGAGGCATTTTTATCAGCATGTT GTGGAGCTTTTATAAACGGCTATGCTGGAGATTTGCTGTTAAAAGAGAAAGGTTATTATTATACCCCATTAGATTTGATT GAAAAAATCCCTAATGTCTTAAAAATCTTTCAATGA
Upstream 100 bases:
>100_bases TCTGGAACTGTTAGTGGCACTTTTACATCTCTCTTTTTTAACCTCTTTATCATAAAAATCCCCACAATAAATATATGAAA CTAACTACAAAAATAGTTAT
Downstream 100 bases:
>100_bases AACTATTAAATTATTTATTCAAGGAAAAATATTTAAAGACAAATAATAGGAGGGATTATGAAGGCAGATTTGCACATACA CACAAAATATTCTGGAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MRRDINNFLFGERMELFEILKQKIKEKEVITPKEMAIIDDNAEFLGIQKILLMENAGKAVYEEIKDIDAEEFIIFCGTGN NGGDGFVVARHLGKGDVILIGKESEIKTYEARENFKILKNLAEFGNIRIREIKWAEEVNDIFERLKNKKAVIIDAMIGTG VKGELREPFKTIVDKINELKQINKNIFVISVDVETGHLESDLTITFHKRKTINKDNAIVKKIGIPKEAEYIVGWGDLKAL RKRDSNSHKGQNGKVLIIGGSKDFYGAPILAGLAALKIVDLVGILSVGKVIDKVNHPEFIMYRVEGDYLSSQHVDYTLEI AKKYDVVVLGNGLGANNRTKAFLNEFLAKYDGKVVIDADAIKVIDYNNFEFSENYIFTPHKREFEYMGIDLDNIENIKST IVLKGKYDIIFNANNLKINKTGNAGLTKGGTGDVLAGLIGALFAVNEAFLSACCGAFINGYAGDLLLKEKGYYYTPLDLI EKIPNVLKIFQ
Sequences:
>Translated_491_residues MRRDINNFLFGERMELFEILKQKIKEKEVITPKEMAIIDDNAEFLGIQKILLMENAGKAVYEEIKDIDAEEFIIFCGTGN NGGDGFVVARHLGKGDVILIGKESEIKTYEARENFKILKNLAEFGNIRIREIKWAEEVNDIFERLKNKKAVIIDAMIGTG VKGELREPFKTIVDKINELKQINKNIFVISVDVETGHLESDLTITFHKRKTINKDNAIVKKIGIPKEAEYIVGWGDLKAL RKRDSNSHKGQNGKVLIIGGSKDFYGAPILAGLAALKIVDLVGILSVGKVIDKVNHPEFIMYRVEGDYLSSQHVDYTLEI AKKYDVVVLGNGLGANNRTKAFLNEFLAKYDGKVVIDADAIKVIDYNNFEFSENYIFTPHKREFEYMGIDLDNIENIKST IVLKGKYDIIFNANNLKINKTGNAGLTKGGTGDVLAGLIGALFAVNEAFLSACCGAFINGYAGDLLLKEKGYYYTPLDLI EKIPNVLKIFQ >Mature_491_residues MRRDINNFLFGERMELFEILKQKIKEKEVITPKEMAIIDDNAEFLGIQKILLMENAGKAVYEEIKDIDAEEFIIFCGTGN NGGDGFVVARHLGKGDVILIGKESEIKTYEARENFKILKNLAEFGNIRIREIKWAEEVNDIFERLKNKKAVIIDAMIGTG VKGELREPFKTIVDKINELKQINKNIFVISVDVETGHLESDLTITFHKRKTINKDNAIVKKIGIPKEAEYIVGWGDLKAL RKRDSNSHKGQNGKVLIIGGSKDFYGAPILAGLAALKIVDLVGILSVGKVIDKVNHPEFIMYRVEGDYLSSQHVDYTLEI AKKYDVVVLGNGLGANNRTKAFLNEFLAKYDGKVVIDADAIKVIDYNNFEFSENYIFTPHKREFEYMGIDLDNIENIKST IVLKGKYDIIFNANNLKINKTGNAGLTKGGTGDVLAGLIGALFAVNEAFLSACCGAFINGYAGDLLLKEKGYYYTPLDLI EKIPNVLKIFQ
Specific function: Unknown
COG id: COG0063
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 YjeF N-terminal domain
Homologues:
Organism=Escherichia coli, GI1790609, Length=510, Percent_Identity=29.2156862745098, Blast_Score=155, Evalue=4e-39, Organism=Saccharomyces cerevisiae, GI6324129, Length=159, Percent_Identity=32.7044025157233, Blast_Score=67, Evalue=9e-12, Organism=Saccharomyces cerevisiae, GI6322698, Length=240, Percent_Identity=29.1666666666667, Blast_Score=65, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1586_METJA (Q58981)
Other databases:
- EMBL: L77117 - PIR: A64498 - RefSeq: NP_248595.1 - ProteinModelPortal: Q58981 - SMR: Q58981 - GeneID: 1452495 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1586 - NMPDR: fig|243232.1.peg.1632 - TIGR: MJ1586 - HOGENOM: HBG662407 - OMA: ENDVTVF - ProtClustDB: CLSK876633 - BioCyc: MJAN243232:MJ_1586-MONOMER - InterPro: IPR017953 - InterPro: IPR000631 - InterPro: IPR004443 - TIGRFAMs: TIGR00196 - TIGRFAMs: TIGR00197
Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N; SSF64153 YjeF_N
EC number: NA
Molecular weight: Translated: 54979; Mature: 54979
Theoretical pI: Translated: 6.65; Mature: 6.65
Prosite motif: PS01049 YJEF_C_1; PS01050 YJEF_C_2; PS51383 YJEF_C_3; PS51385 YJEF_N
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRDINNFLFGERMELFEILKQKIKEKEVITPKEMAIIDDNAEFLGIQKILLMENAGKAV CCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHEEEEEEECCCHHH YEEIKDIDAEEFIIFCGTGNNGGDGFVVARHLGKGDVILIGKESEIKTYEARENFKILKN HHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH LAEFGNIRIREIKWAEEVNDIFERLKNKKAVIIDAMIGTGVKGELREPFKTIVDKINELK HHHHCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QINKNIFVISVDVETGHLESDLTITFHKRKTINKDNAIVKKIGIPKEAEYIVGWGDLKAL HHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECHHHHHH RKRDSNSHKGQNGKVLIIGGSKDFYGAPILAGLAALKIVDLVGILSVGKVIDKVNHPEFI HHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE MYRVEGDYLSSQHVDYTLEIAKKYDVVVLGNGLGANNRTKAFLNEFLAKYDGKVVIDADA EEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCE IKVIDYNNFEFSENYIFTPHKREFEYMGIDLDNIENIKSTIVLKGKYDIIFNANNLKINK EEEEECCCCEECCCEEECCCCCCCEEECCCHHHHHCCCEEEEEEEEEEEEEECCCEEEEC TGNAGLTKGGTGDVLAGLIGALFAVNEAFLSACCGAFINGYAGDLLLKEKGYYYTPLDLI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCHHHH EKIPNVLKIFQ HHCHHHHHHCC >Mature Secondary Structure MRRDINNFLFGERMELFEILKQKIKEKEVITPKEMAIIDDNAEFLGIQKILLMENAGKAV CCCCCCHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEHEEEEEEECCCHHH YEEIKDIDAEEFIIFCGTGNNGGDGFVVARHLGKGDVILIGKESEIKTYEARENFKILKN HHHHHCCCCCCEEEEEECCCCCCCCEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHH LAEFGNIRIREIKWAEEVNDIFERLKNKKAVIIDAMIGTGVKGELREPFKTIVDKINELK HHHHCCEEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHH QINKNIFVISVDVETGHLESDLTITFHKRKTINKDNAIVKKIGIPKEAEYIVGWGDLKAL HHCCCEEEEEEEEECCCCCCCEEEEEECCCCCCCCCCCCEECCCCCCCCEEEECHHHHHH RKRDSNSHKGQNGKVLIIGGSKDFYGAPILAGLAALKIVDLVGILSVGKVIDKVNHPEFI HHCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE MYRVEGDYLSSQHVDYTLEIAKKYDVVVLGNGLGANNRTKAFLNEFLAKYDGKVVIDADA EEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCEEEEECCE IKVIDYNNFEFSENYIFTPHKREFEYMGIDLDNIENIKSTIVLKGKYDIIFNANNLKINK EEEEECCCCEECCCEEECCCCCCCEEECCCHHHHHCCCEEEEEEEEEEEEEECCCEEEEC TGNAGLTKGGTGDVLAGLIGALFAVNEAFLSACCGAFINGYAGDLLLKEKGYYYTPLDLI CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEECCHHHH EKIPNVLKIFQ HHCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087