| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669773
Identifier: 15669773
GI number: 15669773
Start: 1552191
End: 1553987
Strand: Direct
Name: 15669773
Synonym: MJ1577
Alternate gene names: NA
Gene position: 1552191-1553987 (Clockwise)
Preceding gene: 15669772
Following gene: 15669774
Centisome position: 93.23
GC content: 30.83
Gene sequence:
>1797_bases ATGAGGGAGGAGAAGGAAATTATCATTGTCTGTCTTCTCATTTTTATTGTGGGAGTTGTTGGAATTTTTTTGACCACATC ATTTAACGGAATGAAATACACTTCTATATATATTAAAGACTATGAGGCAAATTTGTATATTGGGAAGAATTTAACATTAG AAGAAATTTACAGTTATGAGGTCTTAGAAGGTAGGAAGTACAGGATGCTATATAGAGATTGGAAAGCTCCATTGGTCTAT AATGGCAGTTTAAATACCCCTTATGTAAAAGTTTTAAACCTCTCTACCTCATCAAAAGACATGGTTGGATATGTTGTTGA TTATAAAGGAGACATTTTTGTATTTAGTGATGAGGACTGGATAAAAAGAAATATTGAAGAGATTGTAGATAAATATTATA TAAGAAACGAAGTTGGATTCTATAACCCTCTTTACATACGCAATCCCGGAATTTATACAACAAGTTATAAGTTTGTCATA TATCCTCCAATTGAGACCGACAATGTATTTTATCATATAAATTTAAAGCTTGCAGATGAACACCTCCCTTACAAAAATGT TAAAATTAATGTTATAGACGAAAATAACAGTATATTAGATTTGTTCGTCTATCCTTCAACATTCAAGGTTTATAAAACAT ATTTTGGTTATACTATTGAAGGAAGTAGTCCAAAGAATGACCCAATTGAAGTTGAAATGTTGTTAAAACCAAATTCAGTT AATGGATTCACAAGATATGTTTATAATGTAGAGGGAAAAACAATATCTGCCTATAAAAAATATACTTTTGTAAGTAACAT TGTAATGACTTTAAAATATCTCCTAATGGCAATAATTTTGTTATTTCCATTGATAGCTTATATCATATATTTAAAATTTG GAAAGGAGAAGTTTTATGTAGTTCCAGAATATTTAAGCTATGTTCCAAATAAAAATAGAAAACCATGGATTGTTAATCTC ATATTTGCTGGAGATGCCGGATTTTTTGATAAAGAGGGATTTTATGCCACTTTATTGGACTTACATAACAGGGGCTATAT AAAAATAATGAACGGTGGAAAAATAGAGATTTTAAAAACAGATTTAGAAAATTTGGATGTATATGAATCAGATGTTATGA AGTTTTTGATGAAGTATTCAAAAAACAATGTATTTGACCCTGAGTATATAAAATCCCTTGCTCAGAAATATAAATCTTCT AAGGATAAACTTAAGAAGTTAAAAGATGAGTTAGATAAAATTATGGAGTATCCAAGATATTCATCAAAAGTGGTAAATGC TTTCTTAGAAACAAGAGGAAAGAAGATAATTATAGCACTTTTAGTAATATCTATATTACTTGCAGTATTCCTATATTTCA TACCCAAATATTCCCAAACATTTAATGAGGTATTTTACCTCTCAATAGTATTTGTTGTCCAAAATATTATTTTGGCATTA ACCCCTACATCTCTGTTTGGAAGGTGGAAAGCCAATTATTATAAAGAAAAATTGGAGTGGGATGCGTTTAAAAACTTTTT ATCCAACTTAGCGATGATTAAAAAATATTCTCCGGAGGATATATCAATTTGGAAGGATTGGCTTATTTATGGAACAGCTT TAGGAGTTGGAGATAAAGTCGTTGAGGCGATGAAATCGTTAAACCTCTCTGAATTGGTTGCTGACTATGTAATAATTCAC TCAAACTATGATTCAATGAAAACTTCTGTAGATAGTGTATATTCATCAACAACAGGCTCTGGCGGAGGATTTGGAGCAGG AGGAGGCTTTGGTGGCGGGGGAGGAGGAGCGAGATAA
Upstream 100 bases:
>100_bases TTGGATTTAGGAAGATGGATTATCTGCAGTTTGAAGAGGAGATATATGAAAGACCTAAGATTAGCTTTTAATTATTAATT TTAATTTTTAGGGGATTTTT
Downstream 100 bases:
>100_bases TTTTCATAAGTAAATTTTATTAATTTTGAAAGACCTACTATAAAAACAAAAACAAGAGGAGAAATAATGGATAATAATAG AAAAGTTATAATTGTTGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 598; Mature: 598
Protein sequence:
>598_residues MREEKEIIIVCLLIFIVGVVGIFLTTSFNGMKYTSIYIKDYEANLYIGKNLTLEEIYSYEVLEGRKYRMLYRDWKAPLVY NGSLNTPYVKVLNLSTSSKDMVGYVVDYKGDIFVFSDEDWIKRNIEEIVDKYYIRNEVGFYNPLYIRNPGIYTTSYKFVI YPPIETDNVFYHINLKLADEHLPYKNVKINVIDENNSILDLFVYPSTFKVYKTYFGYTIEGSSPKNDPIEVEMLLKPNSV NGFTRYVYNVEGKTISAYKKYTFVSNIVMTLKYLLMAIILLFPLIAYIIYLKFGKEKFYVVPEYLSYVPNKNRKPWIVNL IFAGDAGFFDKEGFYATLLDLHNRGYIKIMNGGKIEILKTDLENLDVYESDVMKFLMKYSKNNVFDPEYIKSLAQKYKSS KDKLKKLKDELDKIMEYPRYSSKVVNAFLETRGKKIIIALLVISILLAVFLYFIPKYSQTFNEVFYLSIVFVVQNIILAL TPTSLFGRWKANYYKEKLEWDAFKNFLSNLAMIKKYSPEDISIWKDWLIYGTALGVGDKVVEAMKSLNLSELVADYVIIH SNYDSMKTSVDSVYSSTTGSGGGFGAGGGFGGGGGGAR
Sequences:
>Translated_598_residues MREEKEIIIVCLLIFIVGVVGIFLTTSFNGMKYTSIYIKDYEANLYIGKNLTLEEIYSYEVLEGRKYRMLYRDWKAPLVY NGSLNTPYVKVLNLSTSSKDMVGYVVDYKGDIFVFSDEDWIKRNIEEIVDKYYIRNEVGFYNPLYIRNPGIYTTSYKFVI YPPIETDNVFYHINLKLADEHLPYKNVKINVIDENNSILDLFVYPSTFKVYKTYFGYTIEGSSPKNDPIEVEMLLKPNSV NGFTRYVYNVEGKTISAYKKYTFVSNIVMTLKYLLMAIILLFPLIAYIIYLKFGKEKFYVVPEYLSYVPNKNRKPWIVNL IFAGDAGFFDKEGFYATLLDLHNRGYIKIMNGGKIEILKTDLENLDVYESDVMKFLMKYSKNNVFDPEYIKSLAQKYKSS KDKLKKLKDELDKIMEYPRYSSKVVNAFLETRGKKIIIALLVISILLAVFLYFIPKYSQTFNEVFYLSIVFVVQNIILAL TPTSLFGRWKANYYKEKLEWDAFKNFLSNLAMIKKYSPEDISIWKDWLIYGTALGVGDKVVEAMKSLNLSELVADYVIIH SNYDSMKTSVDSVYSSTTGSGGGFGAGGGFGGGGGGAR >Mature_598_residues MREEKEIIIVCLLIFIVGVVGIFLTTSFNGMKYTSIYIKDYEANLYIGKNLTLEEIYSYEVLEGRKYRMLYRDWKAPLVY NGSLNTPYVKVLNLSTSSKDMVGYVVDYKGDIFVFSDEDWIKRNIEEIVDKYYIRNEVGFYNPLYIRNPGIYTTSYKFVI YPPIETDNVFYHINLKLADEHLPYKNVKINVIDENNSILDLFVYPSTFKVYKTYFGYTIEGSSPKNDPIEVEMLLKPNSV NGFTRYVYNVEGKTISAYKKYTFVSNIVMTLKYLLMAIILLFPLIAYIIYLKFGKEKFYVVPEYLSYVPNKNRKPWIVNL IFAGDAGFFDKEGFYATLLDLHNRGYIKIMNGGKIEILKTDLENLDVYESDVMKFLMKYSKNNVFDPEYIKSLAQKYKSS KDKLKKLKDELDKIMEYPRYSSKVVNAFLETRGKKIIIALLVISILLAVFLYFIPKYSQTFNEVFYLSIVFVVQNIILAL TPTSLFGRWKANYYKEKLEWDAFKNFLSNLAMIKKYSPEDISIWKDWLIYGTALGVGDKVVEAMKSLNLSELVADYVIIH SNYDSMKTSVDSVYSSTTGSGGGFGAGGGFGGGGGGAR
Specific function: Unknown
COG id: COG4907
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1577_METJA (Q58972)
Other databases:
- EMBL: L77117 - PIR: H64496 - RefSeq: NP_248586.1 - ProteinModelPortal: Q58972 - GeneID: 1452486 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1577 - NMPDR: fig|243232.1.peg.1623 - TIGR: MJ1577 - HOGENOM: HBG541904 - OMA: KEKLEWD - ProtClustDB: CLSK876628 - BioCyc: MJAN243232:MJ_1577-MONOMER - InterPro: IPR018702
Pfam domain/function: PF09972 DUF2207
EC number: NA
Molecular weight: Translated: 68960; Mature: 68960
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xef3dddc)-; HASH(0xef9d120)-; HASH(0xec905e8)-; HASH(0xe8dad70)-;
Cys/Met content:
0.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MREEKEIIIVCLLIFIVGVVGIFLTTSFNGMKYTSIYIKDYEANLYIGKNLTLEEIYSYE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECEEEECCCCCHHHHHHHH VLEGRKYRMLYRDWKAPLVYNGSLNTPYVKVLNLSTSSKDMVGYVVDYKGDIFVFSDEDW HHCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCHH IKRNIEEIVDKYYIRNEVGFYNPLYIRNPGIYTTSYKFVIYPPIETDNVFYHINLKLADE HHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC HLPYKNVKINVIDENNSILDLFVYPSTFKVYKTYFGYTIEGSSPKNDPIEVEMLLKPNSV CCCCCCEEEEEEECCCCEEEEEEECCHHHEEHHHCCEEEECCCCCCCCEEEEEEECCCCC NGFTRYVYNVEGKTISAYKKYTFVSNIVMTLKYLLMAIILLFPLIAYIIYLKFGKEKFYV CCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEE VPEYLSYVPNKNRKPWIVNLIFAGDAGFFDKEGFYATLLDLHNRGYIKIMNGGKIEILKT CHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEC DLENLDVYESDVMKFLMKYSKNNVFDPEYIKSLAQKYKSSKDKLKKLKDELDKIMEYPRY CHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCH SSKVVNAFLETRGKKIIIALLVISILLAVFLYFIPKYSQTFNEVFYLSIVFVVQNIILAL HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE TPTSLFGRWKANYYKEKLEWDAFKNFLSNLAMIKKYSPEDISIWKDWLIYGTALGVGDKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH VEAMKSLNLSELVADYVIIHSNYDSMKTSVDSVYSSTTGSGGGFGAGGGFGGGGGGAR HHHHHCCCHHHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH >Mature Secondary Structure MREEKEIIIVCLLIFIVGVVGIFLTTSFNGMKYTSIYIKDYEANLYIGKNLTLEEIYSYE CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEECEEEECCCCCHHHHHHHH VLEGRKYRMLYRDWKAPLVYNGSLNTPYVKVLNLSTSSKDMVGYVVDYKGDIFVFSDEDW HHCCCEEEEEECCCCCCEEEECCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEECCCHH IKRNIEEIVDKYYIRNEVGFYNPLYIRNPGIYTTSYKFVIYPPIETDNVFYHINLKLADE HHHHHHHHHHHHHHHCCCCCCCCEEEECCCEEEEEEEEEEECCCCCCCEEEEEEEEEECC HLPYKNVKINVIDENNSILDLFVYPSTFKVYKTYFGYTIEGSSPKNDPIEVEMLLKPNSV CCCCCCEEEEEEECCCCEEEEEEECCHHHEEHHHCCEEEECCCCCCCCEEEEEEECCCCC NGFTRYVYNVEGKTISAYKKYTFVSNIVMTLKYLLMAIILLFPLIAYIIYLKFGKEKFYV CCEEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCEEEE VPEYLSYVPNKNRKPWIVNLIFAGDAGFFDKEGFYATLLDLHNRGYIKIMNGGKIEILKT CHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEEEC DLENLDVYESDVMKFLMKYSKNNVFDPEYIKSLAQKYKSSKDKLKKLKDELDKIMEYPRY CHHCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCH SSKVVNAFLETRGKKIIIALLVISILLAVFLYFIPKYSQTFNEVFYLSIVFVVQNIILAL HHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEE TPTSLFGRWKANYYKEKLEWDAFKNFLSNLAMIKKYSPEDISIWKDWLIYGTALGVGDKV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHH VEAMKSLNLSELVADYVIIHSNYDSMKTSVDSVYSSTTGSGGGFGAGGGFGGGGGGAR HHHHHCCCHHHHHHCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087