| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669720
Identifier: 15669720
GI number: 15669720
Start: 1501697
End: 1504498
Strand: Direct
Name: 15669720
Synonym: MJ1525
Alternate gene names: NA
Gene position: 1501697-1504498 (Clockwise)
Preceding gene: 15669719
Following gene: 15669724
Centisome position: 90.19
GC content: 33.15
Gene sequence:
>2802_bases ATGTATATAAAGGTGAAACTTATGAGTAATGCATTAGAAAAAATAAACAATTTTTTCAAAGAGAAAAGCTGGATAAAGGT ATTTTTAATTATTTTGATGTTGATGTTTGTAAGTTTTCAGTTGAGGGCTCAAACAGCGGATATGAAATTTGCCCAAGATA ACGAATTTTTAAAAGATATGTTTTCAGATGAACATGGAAGGATGTATCTTTTAGCGTTAGACCCTTACTACTACTTAAGA TTAAGTGAAAATCTCTACAATAACGGACACTGTGGGGATACAATAAAAGTTGTTGATGGAAAAGAAACACCTTATGATTT ATATCAATACGCTCCTCCAGGACATCCACTGCCTTGGGAACCACCAGTTATCTGTTTAGCAACATTAGCTATCTACTATA TATGGCATTCTATTGATTTGACTGTAACCATTATGAATGCTGCCTTCTGGGTTCCAGCAGTGTTGGGGATGTTGTTGGGA ATACCAATTTATTTCGTGGTTAGGAGAGTTACAAATAGTAACATTGGAGGGATAGCTGGGGCTATAGCCCTAATATCGGC TCCTGGTTTATTATACAAAACATGTGCTGGATTTGCAGACACACCAATATTTGAAGTTCTACCAATACTCTTTATAGTTT GGTTTATTCTTGAGTCAATACACAGCCAGGAAAAAACTGCATTATTTAAAAAGGATTTAAAGAATCCTATTTCTTTATTC GTAATCGCTGCATTAATAATCGAGTTAATAATTGGAGCTTACTTAAATATCGCTTCAGGAGAAAGTGTAGTTATCGCTTC AATATTATTTTATACAGTATCTTTAGCATTTATTTTAGCAGGTTTAATAATAGCAGGAATTAAAAAATTGAAAGGTAATG AATTAGAGTTTGAATTATTTGCTTTATTGGCTGTAATATTAACAGCTGTGTCTCCAAAAATGTGGGGAGCTTGGTGGTAT GGATTCGATGTAATAACCGCTTTCTTAGTAATATATATCATCGCCTTAGCATTATTAAAATCACAGGTAAAAATAAAAGA GTTTATTAATATTGGAAACCTTAAAAACATTGTCTATCTATCCATATTTTACATATTTGGGTCATTTGTATTATTGGTAG CAATATATGGTATGGGGATAGCAATTTCACCAATTACTTCACCTCTGGGTTATAACCAAATACTTTCAACTTACACTCAA ACAACTGGTTGGCCTAACGTTTATACAACCGTTGCAGAGCTTGCAAAACCAAGCTCATGGAGTGAGATATTTACAAATGC CATTGGTTCAGATACAATAGCAATTGTTGGAATACTTGGGATACTTTTATCATTCTTATCTTTAAGATATGAAAAAGTTA AGTTGGATATAAAATATTCTATATTATTGGCTATTTGGTTAGCAGTAACTTTATATGCAGCAACAAAAGGAATTAGGTTT GCAGCTTTAGCAACTCCTCCATTGGCAATTGGTTTAGGGATATTTGTTGGGCAGTTAGAGAGATTCTTAAAAATGAAAAG CGATATTGCAATATTTGGTATTGGCATCCCTGCTGGAATATTTGGATTATTAATACTTTCAAAATACTCTGCAAAAATCT CTCAAATACTATTACCAACGACTTATGTTCCTATAATTGCCTATGGATTTTTAATTGTCTTAGCCCTATTAGCTATCTAC AAAATATCTGATATAATCTCAACATTAAATGACAAAAAAGAAACAATAATAAAAGTTTCTACATTACTACTTTGCATTGG AGTCGTTATACCTCCATTATCTGCCGTAGTTCCATTTTCTGTTGCCCCAACCTTCAACAACGGATGGAAAGAAGGTTTAG ATTGGATAAAGGCAAATACTCCAAACAACTCAGTTATAACCTGCTGGTGGGATAACGGGCACATCTACACTTATGAGGCA AGAAGAATGGTAACATTTGATGGAGGTAGTCAAAACTCTCCAAGAGCTTACTGGGTAGGAAGAGCTTTTGCGACATCAAA CGAAAATCTATCTATCGGAATAATTAGGATGTTAGCAACAAGTGGAGATGAAGCATTTAAAAAAGGCAGTGTTCTAATGA ACTTCACTCACAACAATGTCTCAAAGACAGTTAAGATATTGAATGAAATATTGCCAGTAGATAGAAGTAAAGCTTATGAT ATATTAACTAAAAAATACGGGTTGAGTGATAAAAAAGCAAAATTAGTTCTAAATGCAACCCATCCAGAACATCCAAATCC AGATTATTTAATAACATACAACAGAATGACAGATATTGCCCCAGTTTGGAGTATGTTTGGATTCTGGAATTTCTCTCTAC CACCAAACACTCCAAATGACAAGAGGGAAAAAGGAGCGTTCTTTAAAGGAACTGCCTACTATTTAGGAAATGGAACAATC TTAGCAAATGTAAATGTCTATACATATAGTTATGTCACATTAATAAATAGTACTAACATTTCAACAGCAATTGTTCAAAA AATAAATGGACAAGCAAAAATCATTGGAACATTTAAGATACACAAGTTGTATATTAAAACACCTTTGGGAGTTAAGGAAC TTGTATTAAATAAAGATGGACAGTTATCAGAGTTTATTAGAATAGAAGCAGATGGAAGAGGGTATGCCTGGTTAGCAACA AGAAACTTAGAAGATAGTATCTACGCTAAATTACACTTCTTAGATGGTTATGGATTAAAGCATATAAAGCTGGTTAAAGC TACAATAGACCCAACAGACTTTGGCATTCAGCCAGGATTTAAGATTTATAAGGTAGATTATGGAACTGATTATCTAAAAT AA
Upstream 100 bases:
>100_bases ATTATTGAATGTGTTGATATTGAAGAAAATATAAATAGGGTTTTACCTAAGTTATATGAAGTTATAAAAAATAACGGATT GATAATAATAACTGACTGTC
Downstream 100 bases:
>100_bases ACTTTTTAAACTTTGATGAGTTAATAAATATCGAACAGCTCTCCCAAGGTTATTCTTTTATCTGTCTTGACTAACTCTGG AATTTTTCCTTTAATTCCTA
Product: putative transmembrane oligosaccharyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 933; Mature: 933
Protein sequence:
>933_residues MYIKVKLMSNALEKINNFFKEKSWIKVFLIILMLMFVSFQLRAQTADMKFAQDNEFLKDMFSDEHGRMYLLALDPYYYLR LSENLYNNGHCGDTIKVVDGKETPYDLYQYAPPGHPLPWEPPVICLATLAIYYIWHSIDLTVTIMNAAFWVPAVLGMLLG IPIYFVVRRVTNSNIGGIAGAIALISAPGLLYKTCAGFADTPIFEVLPILFIVWFILESIHSQEKTALFKKDLKNPISLF VIAALIIELIIGAYLNIASGESVVIASILFYTVSLAFILAGLIIAGIKKLKGNELEFELFALLAVILTAVSPKMWGAWWY GFDVITAFLVIYIIALALLKSQVKIKEFINIGNLKNIVYLSIFYIFGSFVLLVAIYGMGIAISPITSPLGYNQILSTYTQ TTGWPNVYTTVAELAKPSSWSEIFTNAIGSDTIAIVGILGILLSFLSLRYEKVKLDIKYSILLAIWLAVTLYAATKGIRF AALATPPLAIGLGIFVGQLERFLKMKSDIAIFGIGIPAGIFGLLILSKYSAKISQILLPTTYVPIIAYGFLIVLALLAIY KISDIISTLNDKKETIIKVSTLLLCIGVVIPPLSAVVPFSVAPTFNNGWKEGLDWIKANTPNNSVITCWWDNGHIYTYEA RRMVTFDGGSQNSPRAYWVGRAFATSNENLSIGIIRMLATSGDEAFKKGSVLMNFTHNNVSKTVKILNEILPVDRSKAYD ILTKKYGLSDKKAKLVLNATHPEHPNPDYLITYNRMTDIAPVWSMFGFWNFSLPPNTPNDKREKGAFFKGTAYYLGNGTI LANVNVYTYSYVTLINSTNISTAIVQKINGQAKIIGTFKIHKLYIKTPLGVKELVLNKDGQLSEFIRIEADGRGYAWLAT RNLEDSIYAKLHFLDGYGLKHIKLVKATIDPTDFGIQPGFKIYKVDYGTDYLK
Sequences:
>Translated_933_residues MYIKVKLMSNALEKINNFFKEKSWIKVFLIILMLMFVSFQLRAQTADMKFAQDNEFLKDMFSDEHGRMYLLALDPYYYLR LSENLYNNGHCGDTIKVVDGKETPYDLYQYAPPGHPLPWEPPVICLATLAIYYIWHSIDLTVTIMNAAFWVPAVLGMLLG IPIYFVVRRVTNSNIGGIAGAIALISAPGLLYKTCAGFADTPIFEVLPILFIVWFILESIHSQEKTALFKKDLKNPISLF VIAALIIELIIGAYLNIASGESVVIASILFYTVSLAFILAGLIIAGIKKLKGNELEFELFALLAVILTAVSPKMWGAWWY GFDVITAFLVIYIIALALLKSQVKIKEFINIGNLKNIVYLSIFYIFGSFVLLVAIYGMGIAISPITSPLGYNQILSTYTQ TTGWPNVYTTVAELAKPSSWSEIFTNAIGSDTIAIVGILGILLSFLSLRYEKVKLDIKYSILLAIWLAVTLYAATKGIRF AALATPPLAIGLGIFVGQLERFLKMKSDIAIFGIGIPAGIFGLLILSKYSAKISQILLPTTYVPIIAYGFLIVLALLAIY KISDIISTLNDKKETIIKVSTLLLCIGVVIPPLSAVVPFSVAPTFNNGWKEGLDWIKANTPNNSVITCWWDNGHIYTYEA RRMVTFDGGSQNSPRAYWVGRAFATSNENLSIGIIRMLATSGDEAFKKGSVLMNFTHNNVSKTVKILNEILPVDRSKAYD ILTKKYGLSDKKAKLVLNATHPEHPNPDYLITYNRMTDIAPVWSMFGFWNFSLPPNTPNDKREKGAFFKGTAYYLGNGTI LANVNVYTYSYVTLINSTNISTAIVQKINGQAKIIGTFKIHKLYIKTPLGVKELVLNKDGQLSEFIRIEADGRGYAWLAT RNLEDSIYAKLHFLDGYGLKHIKLVKATIDPTDFGIQPGFKIYKVDYGTDYLK >Mature_933_residues MYIKVKLMSNALEKINNFFKEKSWIKVFLIILMLMFVSFQLRAQTADMKFAQDNEFLKDMFSDEHGRMYLLALDPYYYLR LSENLYNNGHCGDTIKVVDGKETPYDLYQYAPPGHPLPWEPPVICLATLAIYYIWHSIDLTVTIMNAAFWVPAVLGMLLG IPIYFVVRRVTNSNIGGIAGAIALISAPGLLYKTCAGFADTPIFEVLPILFIVWFILESIHSQEKTALFKKDLKNPISLF VIAALIIELIIGAYLNIASGESVVIASILFYTVSLAFILAGLIIAGIKKLKGNELEFELFALLAVILTAVSPKMWGAWWY GFDVITAFLVIYIIALALLKSQVKIKEFINIGNLKNIVYLSIFYIFGSFVLLVAIYGMGIAISPITSPLGYNQILSTYTQ TTGWPNVYTTVAELAKPSSWSEIFTNAIGSDTIAIVGILGILLSFLSLRYEKVKLDIKYSILLAIWLAVTLYAATKGIRF AALATPPLAIGLGIFVGQLERFLKMKSDIAIFGIGIPAGIFGLLILSKYSAKISQILLPTTYVPIIAYGFLIVLALLAIY KISDIISTLNDKKETIIKVSTLLLCIGVVIPPLSAVVPFSVAPTFNNGWKEGLDWIKANTPNNSVITCWWDNGHIYTYEA RRMVTFDGGSQNSPRAYWVGRAFATSNENLSIGIIRMLATSGDEAFKKGSVLMNFTHNNVSKTVKILNEILPVDRSKAYD ILTKKYGLSDKKAKLVLNATHPEHPNPDYLITYNRMTDIAPVWSMFGFWNFSLPPNTPNDKREKGAFFKGTAYYLGNGTI LANVNVYTYSYVTLINSTNISTAIVQKINGQAKIIGTFKIHKLYIKTPLGVKELVLNKDGQLSEFIRIEADGRGYAWLAT RNLEDSIYAKLHFLDGYGLKHIKLVKATIDPTDFGIQPGFKIYKVDYGTDYLK
Specific function: Unknown
COG id: COG1287
COG function: function code R; Uncharacterized membrane protein, required for N-linked glycosylation
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the STT3 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1525_METJA (Q58920)
Other databases:
- EMBL: L77117 - PIR: D64490 - RefSeq: NP_248533.1 - ProteinModelPortal: Q58920 - SMR: Q58920 - GeneID: 1452433 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1525 - NMPDR: fig|243232.1.peg.1570 - TIGR: MJ1525 - HOGENOM: HBG541040 - OMA: FDGGSQN - ProtClustDB: CLSK876610 - BioCyc: MJAN243232:MJ_1525-MONOMER - InterPro: IPR003674
Pfam domain/function: PF02516 STT3
EC number: NA
Molecular weight: Translated: 103966; Mature: 103966
Theoretical pI: Translated: 9.45; Mature: 9.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc43ab78)-; HASH(0xdf71224)-; HASH(0xe76111c)-; HASH(0xd41ef7c)-; HASH(0xbabf908)-; HASH(0xe8fee18)-; HASH(0xea60ff8)-; HASH(0xb89f2e4)-; HASH(0xe4b7b34)-; HASH(0xe96a310)-; HASH(0xe9cbc74)-; HASH(0xe9300c8)-; HASH(0xeafbf28)-; HASH(0xc6465dc)-; HASH(0xe908830)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYIKVKLMSNALEKINNFFKEKSWIKVFLIILMLMFVSFQLRAQTADMKFAQDNEFLKDM CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FSDEHGRMYLLALDPYYYLRLSENLYNNGHCGDTIKVVDGKETPYDLYQYAPPGHPLPWE HCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC PPVICLATLAIYYIWHSIDLTVTIMNAAFWVPAVLGMLLGIPIYFVVRRVTNSNIGGIAG CHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AIALISAPGLLYKTCAGFADTPIFEVLPILFIVWFILESIHSQEKTALFKKDLKNPISLF HHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHH VIAALIIELIIGAYLNIASGESVVIASILFYTVSLAFILAGLIIAGIKKLKGNELEFELF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ALLAVILTAVSPKMWGAWWYGFDVITAFLVIYIIALALLKSQVKIKEFINIGNLKNIVYL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SIFYIFGSFVLLVAIYGMGIAISPITSPLGYNQILSTYTQTTGWPNVYTTVAELAKPSSW HHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH SEIFTNAIGSDTIAIVGILGILLSFLSLRYEKVKLDIKYSILLAIWLAVTLYAATKGIRF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCEE AALATPPLAIGLGIFVGQLERFLKMKSDIAIFGIGIPAGIFGLLILSKYSAKISQILLPT EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCH TYVPIIAYGFLIVLALLAIYKISDIISTLNDKKETIIKVSTLLLCIGVVIPPLSAVVPFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCE VAPTFNNGWKEGLDWIKANTPNNSVITCWWDNGHIYTYEARRMVTFDGGSQNSPRAYWVG ECCCCCCCHHHHHHHEECCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCCEEEEE RAFATSNENLSIGIIRMLATSGDEAFKKGSVLMNFTHNNVSKTVKILNEILPVDRSKAYD EEEECCCCCCEEEEEEEHHCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHH ILTKKYGLSDKKAKLVLNATHPEHPNPDYLITYNRMTDIAPVWSMFGFWNFSLPPNTPND HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCEECCCCCCCCCC KREKGAFFKGTAYYLGNGTILANVNVYTYSYVTLINSTNISTAIVQKINGQAKIIGTFKI HHHCCCEEECEEEEEECCEEEEEEEEEEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEEE HKLYIKTPLGVKELVLNKDGQLSEFIRIEADGRGYAWLATRNLEDSIYAKLHFLDGYGLK EEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCC HIKLVKATIDPTDFGIQPGFKIYKVDYGTDYLK EEEEEEEECCCCCCCCCCCCEEEEEECCCCCCH >Mature Secondary Structure MYIKVKLMSNALEKINNFFKEKSWIKVFLIILMLMFVSFQLRAQTADMKFAQDNEFLKDM CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH FSDEHGRMYLLALDPYYYLRLSENLYNNGHCGDTIKVVDGKETPYDLYQYAPPGHPLPWE HCCCCCCEEEEEECCEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHCCCCCCCCCCC PPVICLATLAIYYIWHSIDLTVTIMNAAFWVPAVLGMLLGIPIYFVVRRVTNSNIGGIAG CHHHHHHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH AIALISAPGLLYKTCAGFADTPIFEVLPILFIVWFILESIHSQEKTALFKKDLKNPISLF HHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHH VIAALIIELIIGAYLNIASGESVVIASILFYTVSLAFILAGLIIAGIKKLKGNELEFELF HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH ALLAVILTAVSPKMWGAWWYGFDVITAFLVIYIIALALLKSQVKIKEFINIGNLKNIVYL HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SIFYIFGSFVLLVAIYGMGIAISPITSPLGYNQILSTYTQTTGWPNVYTTVAELAKPSSW HHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCCH SEIFTNAIGSDTIAIVGILGILLSFLSLRYEKVKLDIKYSILLAIWLAVTLYAATKGIRF HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHHHHCCCEE AALATPPLAIGLGIFVGQLERFLKMKSDIAIFGIGIPAGIFGLLILSKYSAKISQILLPT EEECCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCH TYVPIIAYGFLIVLALLAIYKISDIISTLNDKKETIIKVSTLLLCIGVVIPPLSAVVPFS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHCCCE VAPTFNNGWKEGLDWIKANTPNNSVITCWWDNGHIYTYEARRMVTFDGGSQNSPRAYWVG ECCCCCCCHHHHHHHEECCCCCCCEEEEEECCCEEEEEEEEEEEEECCCCCCCCCEEEEE RAFATSNENLSIGIIRMLATSGDEAFKKGSVLMNFTHNNVSKTVKILNEILPVDRSKAYD EEEECCCCCCEEEEEEEHHCCCHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCCCHHHH ILTKKYGLSDKKAKLVLNATHPEHPNPDYLITYNRMTDIAPVWSMFGFWNFSLPPNTPND HHHHHCCCCCCCEEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHCCEECCCCCCCCCC KREKGAFFKGTAYYLGNGTILANVNVYTYSYVTLINSTNISTAIVQKINGQAKIIGTFKI HHHCCCEEECEEEEEECCEEEEEEEEEEEEEEEEEECCCCHHHHHHHCCCCEEEEEEEEE HKLYIKTPLGVKELVLNKDGQLSEFIRIEADGRGYAWLATRNLEDSIYAKLHFLDGYGLK EEEEEECCCCHHHHHHCCCCCCCEEEEEEECCCCEEEEEECCCCCCCEEEEEEECCCCCC HIKLVKATIDPTDFGIQPGFKIYKVDYGTDYLK EEEEEEEECCCCCCCCCCCCEEEEEECCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087