| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669703
Identifier: 15669703
GI number: 15669703
Start: 1482019
End: 1482480
Strand: Direct
Name: 15669703
Synonym: MJ1509
Alternate gene names: NA
Gene position: 1482019-1482480 (Clockwise)
Preceding gene: 15669702
Following gene: 15669705
Centisome position: 89.01
GC content: 30.95
Gene sequence:
>462_bases ATGGCAGAAATGATAATTCCATACCCACAGCTTAAAAAGATAATGAAAACAACTTGTGAAATCGATTTGTATAAAACAGA GGCAGAGGACATAATGGATGTTGTTGAGAAGAAATTAGCAGATTTATTTGAAGTAGCACACAGAAATGCAAAGGAAGAGA ATGCAAAAATCATAAAGATGAGGCACATCCCATTAACAAAAGGATTTTTAAACTCAATGGAGTTATTTAGAAGCGTTATT GAAGAGGAAAACATAGTAGCTGAAACAATTAAAAAGTATGTTATGAAAAAAATACCTGGAGACTTACCTTTGGATGACAT AGTTGTTGATAACCTTCCATTAATAACAGGAACAATATTTATTGTAGTTGGTAGAGTAATTAAAGCGTTACATGAAGATA TTGAGAGAATAAGAAAAGAGCATATTGAAGAAGCTAAGAAAGTATTAGACTACACATTATAA
Upstream 100 bases:
>100_bases AATATGGGAACTATAAAGGAAACCTTTATATATAAGTTTCGCAGAGGTATGTTATGAGAACATAAAATAAAAATTTTAAA AATTAAAAAGAGGGGATAGA
Downstream 100 bases:
>100_bases TCGCTATTTTTCATTTTTTATTTTTTCAGTTCATCCAATCTATTTGCCCATCTCATTAAAATTTCTCTTGCTCTTTTAAG TTTAGAGTTGCTGTAGTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MAEMIIPYPQLKKIMKTTCEIDLYKTEAEDIMDVVEKKLADLFEVAHRNAKEENAKIIKMRHIPLTKGFLNSMELFRSVI EEENIVAETIKKYVMKKIPGDLPLDDIVVDNLPLITGTIFIVVGRVIKALHEDIERIRKEHIEEAKKVLDYTL
Sequences:
>Translated_153_residues MAEMIIPYPQLKKIMKTTCEIDLYKTEAEDIMDVVEKKLADLFEVAHRNAKEENAKIIKMRHIPLTKGFLNSMELFRSVI EEENIVAETIKKYVMKKIPGDLPLDDIVVDNLPLITGTIFIVVGRVIKALHEDIERIRKEHIEEAKKVLDYTL >Mature_152_residues AEMIIPYPQLKKIMKTTCEIDLYKTEAEDIMDVVEKKLADLFEVAHRNAKEENAKIIKMRHIPLTKGFLNSMELFRSVIE EENIVAETIKKYVMKKIPGDLPLDDIVVDNLPLITGTIFIVVGRVIKALHEDIERIRKEHIEEAKKVLDYTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1509_METJA (Q58904)
Other databases:
- EMBL: L77117 - PIR: D64488 - RefSeq: NP_248516.1 - ProteinModelPortal: Q58904 - SMR: Q58904 - GeneID: 1452416 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1509 - NMPDR: fig|243232.1.peg.1553 - TIGR: MJ1509 - HOGENOM: HBG243883 - OMA: IKMRHIP - ProtClustDB: CLSK254464 - BioCyc: MJAN243232:MJ_1509-MONOMER - InterPro: IPR015207 - InterPro: IPR009072
Pfam domain/function: PF09123 DUF1931; SSF47113 Histone-fold
EC number: NA
Molecular weight: Translated: 17718; Mature: 17587
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEMIIPYPQLKKIMKTTCEIDLYKTEAEDIMDVVEKKLADLFEVAHRNAKEENAKIIKM CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RHIPLTKGFLNSMELFRSVIEEENIVAETIKKYVMKKIPGDLPLDDIVVDNLPLITGTIF CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH IVVGRVIKALHEDIERIRKEHIEEAKKVLDYTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AEMIIPYPQLKKIMKTTCEIDLYKTEAEDIMDVVEKKLADLFEVAHRNAKEENAKIIKM CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH RHIPLTKGFLNSMELFRSVIEEENIVAETIKKYVMKKIPGDLPLDDIVVDNLPLITGTIF CCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHH IVVGRVIKALHEDIERIRKEHIEEAKKVLDYTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087