| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669697
Identifier: 15669697
GI number: 15669697
Start: 1474579
End: 1474977
Strand: Reverse
Name: 15669697
Synonym: MJ1503
Alternate gene names: NA
Gene position: 1474977-1474579 (Counterclockwise)
Preceding gene: 15669698
Following gene: 15669696
Centisome position: 88.59
GC content: 30.08
Gene sequence:
>399_bases ATGAGTAAACTTTTATTAAAAACTCCATGCACAACCTGGACGTTTGATAGTTTAATGGCATGTGTTTTTGGTATAAAAGT TTCTGATGTCAAAGTTTATTTTGATATTTTAAAAAACGGCCCTTCAAAAATAAACGACATTGCTGAGAGAATTAATAGGG ATAGAAGTACAGTTCAGAGAGCAGTTCAAAATTTAATGAATGCTGGTTTAGTAAAGAGAAAGCAGGTAAATATAAAAGAT GGAGGGTATTATTATGTTTATGAGGCAATTCCATTTGAAGAAACGAAAAAGATTATAAAAAAGACTATGGAAGAGTGGTG CAACAATATGAAAAAATGGGTAGAAGAATTAGAATTCGAGGATGTTGTTAAAGAATATTTAGAGAATATTGAGGAATAA
Upstream 100 bases:
>100_bases AATTTAATAATATAGACTGCGAAAGTCCTATTAAAAGATAATCTTTAAATATAATGATATAATTAGTTAATGCCAATGCC ACAACCATGAAGGTGATAAT
Downstream 100 bases:
>100_bases CTCCAAAAAGATGATTATTATGAAGCTAATATTCTTAGGAACTGGAGCGGCAGTTCCATCAAAAAATAGAAATCATATTG GAATAGCATTCAAATTTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 132; Mature: 131
Protein sequence:
>132_residues MSKLLLKTPCTTWTFDSLMACVFGIKVSDVKVYFDILKNGPSKINDIAERINRDRSTVQRAVQNLMNAGLVKRKQVNIKD GGYYYVYEAIPFEETKKIIKKTMEEWCNNMKKWVEELEFEDVVKEYLENIEE
Sequences:
>Translated_132_residues MSKLLLKTPCTTWTFDSLMACVFGIKVSDVKVYFDILKNGPSKINDIAERINRDRSTVQRAVQNLMNAGLVKRKQVNIKD GGYYYVYEAIPFEETKKIIKKTMEEWCNNMKKWVEELEFEDVVKEYLENIEE >Mature_131_residues SKLLLKTPCTTWTFDSLMACVFGIKVSDVKVYFDILKNGPSKINDIAERINRDRSTVQRAVQNLMNAGLVKRKQVNIKDG GYYYVYEAIPFEETKKIIKKTMEEWCNNMKKWVEELEFEDVVKEYLENIEE
Specific function: Unknown
COG id: COG3355
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1503_METJA (Q58898)
Other databases:
- EMBL: L77117 - PIR: F64487 - RefSeq: NP_248510.1 - ProteinModelPortal: Q58898 - SMR: Q58898 - GeneID: 1452410 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1503 - NMPDR: fig|243232.1.peg.1547 - TIGR: MJ1503 - HOGENOM: HBG541211 - OMA: RDRSTVQ - ProtClustDB: CLSK876602 - BioCyc: MJAN243232:MJ_1503-MONOMER - InterPro: IPR002831 - InterPro: IPR011991 - Gene3D: G3DSA:1.10.10.10
Pfam domain/function: PF01978 TrmB
EC number: NA
Molecular weight: Translated: 15528; Mature: 15397
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLLLKTPCTTWTFDSLMACVFGIKVSDVKVYFDILKNGPSKINDIAERINRDRSTVQR CCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH AVQNLMNAGLVKRKQVNIKDGGYYYVYEAIPFEETKKIIKKTMEEWCNNMKKWVEELEFE HHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVVKEYLENIEE HHHHHHHHHHCC >Mature Secondary Structure SKLLLKTPCTTWTFDSLMACVFGIKVSDVKVYFDILKNGPSKINDIAERINRDRSTVQR CCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHH AVQNLMNAGLVKRKQVNIKDGGYYYVYEAIPFEETKKIIKKTMEEWCNNMKKWVEELEFE HHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVVKEYLENIEE HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087