| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669642
Identifier: 15669642
GI number: 15669642
Start: 1420864
End: 1422318
Strand: Direct
Name: 15669642
Synonym: MJ1451
Alternate gene names: NA
Gene position: 1420864-1422318 (Clockwise)
Preceding gene: 15669641
Following gene: 15669643
Centisome position: 85.34
GC content: 37.46
Gene sequence:
>1455_bases ATGGGAATCTTTGATGTCATCTCAGGACTGTTTAAAAAGAAGCCAAAAATTGCCTATGCAAAGTCACAAAGTGTAGATTT GATTGAGTTAAAAAGAAATCCTTACTATATAGTGGCATCAGTTGAGTTAGGAAATACAACAACAAAATCCATCATAACAG CAACAAATATGGATACTGGTAAAACCTACATTGTTAGCAAGCACGTGAAGATGACAAGGGATGTCAGAAAGCCAAAGAAA GGAGAAGAAGTTTTTGGAGAGACACTATGGGGGGTTGAATTAACAAGAGAGGCAGTTGCAGATATGGTTAAAGAGGTTTT GTTGGAGAGTTTAAAAAAAGCTGGACTAACTGTTGATGACTTACACTTTGTTGTTAGAAGTACTGGAGTTACTGCAGGTT TTGCATCTCCAGAAGAAGTTGGAGAGATGATTATTGCCTTAGCTCAAGGATGTATGAAAGCTGGAGTTCCTCCAGCAAAG ATGACTCCAGCAATGACTAAGGAACAGATACCAAAGCCGTTTGATAAATATTCTTTTTTAGATAAGATTATATTTGATGG AGCGGTTACTGGAGTTCTGCCTCCTACAGGAAAGGAGGTTGTAGCTAACGAGATGGAAGGAGAGCTTGTAACTGCAGGAA TAAAAGTTGGAAGTAAATGGACAGATGTAGATTTCAGAAATCCTTGTATGAGTATTGACTTTGGAACAACCTTGGCTGGT AGAATAACTAATGACACTTTACCTTATGCAAAGGTTATTGGTAATTTATGCGGTTTAGCTGGAGCTATAGCTGATGCAAT TGCAAGGGGTTCTGGAAAAATAGATGAGAAGACTGGAGCGGCTTTAGATTTAGCAAATATAAAAGGAAAGCCAAATGAAG AATTAGCTAAGGAATATGCTGAAGAAATGCACAAATATATAATTATTAAAGAAGTCCCAAAAGATGTTGATAGATTTGGA ACTGTCCCAGTAGACCCAAAGTCCGCTGAAAAGGCTGGAACTACATTAATTGGATGTGATGTTGGTAAGAATGGTAGTGA TTTGATAAAATTGGAAGAATTGGGGAGGGAATTAGTTGAAAAGAGTGATATTCCAACGTTGATGTGCTGTTTAGACTATG TTATGAGTGAAGTTGTTAGAAGGTTGGTAGAGTTAGCTTATAAAAAAGGATTAATTAGTGAAAAGTCAGCTGTAGGAATT ACAGGAAGGGCTGGGATTACTGGCAGAAAGCCAGAATTAATTATTGAGAAGCTTAAAACTTTAGAAATTTGGGATAAAGT TGAGGAAAATGTTGTGTTTGTTGAGGATGGCTTAGCTTTAGGTGCTTCAGTTATGGCAAGATGTATGAACTGTTTGGGAA CTCCTCAAGTGCCTATTGGAGGAGTTAGGGGAGGAGGGTGTATATTAGGTTTAAGGAGAAAATGGCAAAAAGAAAGGGGT ATGATAAGAGATTAA
Upstream 100 bases:
>100_bases TTCAATTATTGCACTATCTAAAAAATTTGTAAGGGAGATTTTATAAACCATAAGCCAGAGATAAATATTTTATTGCAATA TTTTTGTAGAGAGGGGTAGC
Downstream 100 bases:
>100_bases ATACCAAAAATTATATTTTTAAATTATGTCTGTAAAAATGTTATATAAATATGGTTTTAGGCGTAAAACCCCTCCCCTTA TGTTTAACATTATCTAATTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MGIFDVISGLFKKKPKIAYAKSQSVDLIELKRNPYYIVASVELGNTTTKSIITATNMDTGKTYIVSKHVKMTRDVRKPKK GEEVFGETLWGVELTREAVADMVKEVLLESLKKAGLTVDDLHFVVRSTGVTAGFASPEEVGEMIIALAQGCMKAGVPPAK MTPAMTKEQIPKPFDKYSFLDKIIFDGAVTGVLPPTGKEVVANEMEGELVTAGIKVGSKWTDVDFRNPCMSIDFGTTLAG RITNDTLPYAKVIGNLCGLAGAIADAIARGSGKIDEKTGAALDLANIKGKPNEELAKEYAEEMHKYIIIKEVPKDVDRFG TVPVDPKSAEKAGTTLIGCDVGKNGSDLIKLEELGRELVEKSDIPTLMCCLDYVMSEVVRRLVELAYKKGLISEKSAVGI TGRAGITGRKPELIIEKLKTLEIWDKVEENVVFVEDGLALGASVMARCMNCLGTPQVPIGGVRGGGCILGLRRKWQKERG MIRD
Sequences:
>Translated_484_residues MGIFDVISGLFKKKPKIAYAKSQSVDLIELKRNPYYIVASVELGNTTTKSIITATNMDTGKTYIVSKHVKMTRDVRKPKK GEEVFGETLWGVELTREAVADMVKEVLLESLKKAGLTVDDLHFVVRSTGVTAGFASPEEVGEMIIALAQGCMKAGVPPAK MTPAMTKEQIPKPFDKYSFLDKIIFDGAVTGVLPPTGKEVVANEMEGELVTAGIKVGSKWTDVDFRNPCMSIDFGTTLAG RITNDTLPYAKVIGNLCGLAGAIADAIARGSGKIDEKTGAALDLANIKGKPNEELAKEYAEEMHKYIIIKEVPKDVDRFG TVPVDPKSAEKAGTTLIGCDVGKNGSDLIKLEELGRELVEKSDIPTLMCCLDYVMSEVVRRLVELAYKKGLISEKSAVGI TGRAGITGRKPELIIEKLKTLEIWDKVEENVVFVEDGLALGASVMARCMNCLGTPQVPIGGVRGGGCILGLRRKWQKERG MIRD >Mature_483_residues GIFDVISGLFKKKPKIAYAKSQSVDLIELKRNPYYIVASVELGNTTTKSIITATNMDTGKTYIVSKHVKMTRDVRKPKKG EEVFGETLWGVELTREAVADMVKEVLLESLKKAGLTVDDLHFVVRSTGVTAGFASPEEVGEMIIALAQGCMKAGVPPAKM TPAMTKEQIPKPFDKYSFLDKIIFDGAVTGVLPPTGKEVVANEMEGELVTAGIKVGSKWTDVDFRNPCMSIDFGTTLAGR ITNDTLPYAKVIGNLCGLAGAIADAIARGSGKIDEKTGAALDLANIKGKPNEELAKEYAEEMHKYIIIKEVPKDVDRFGT VPVDPKSAEKAGTTLIGCDVGKNGSDLIKLEELGRELVEKSDIPTLMCCLDYVMSEVVRRLVELAYKKGLISEKSAVGIT GRAGITGRKPELIIEKLKTLEIWDKVEENVVFVEDGLALGASVMARCMNCLGTPQVPIGGVRGGGCILGLRRKWQKERGM IRD
Specific function: Unknown
COG id: COG4065
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH1153
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1451_METJA (Q58846)
Other databases:
- EMBL: L77117 - PIR: B64481 - RefSeq: NP_248455.1 - ProteinModelPortal: Q58846 - GeneID: 1452355 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1451 - NMPDR: fig|243232.1.peg.1492 - TIGR: MJ1451 - HOGENOM: HBG541270 - OMA: NEMEGEL - ProtClustDB: CLSK876580 - BioCyc: MJAN243232:MJ_1451-MONOMER - InterPro: IPR008303 - PIRSF: PIRSF016937 - TIGRFAMs: TIGR03285
Pfam domain/function: PF09887 DUF2114
EC number: NA
Molecular weight: Translated: 52433; Mature: 52302
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFDVISGLFKKKPKIAYAKSQSVDLIELKRNPYYIVASVELGNTTTKSIITATNMDTG CCHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCHHHEEEECCCCCC KTYIVSKHVKMTRDVRKPKKGEEVFGETLWGVELTREAVADMVKEVLLESLKKAGLTVDD CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LHFVVRSTGVTAGFASPEEVGEMIIALAQGCMKAGVPPAKMTPAMTKEQIPKPFDKYSFL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHH DKIIFDGAVTGVLPPTGKEVVANEMEGELVTAGIKVGSKWTDVDFRNPCMSIDFGTTLAG HHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCEEEECCCCEEC RITNDTLPYAKVIGNLCGLAGAIADAIARGSGKIDEKTGAALDLANIKGKPNEELAKEYA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH EEMHKYIIIKEVPKDVDRFGTVPVDPKSAEKAGTTLIGCDVGKNGSDLIKLEELGRELVE HHHHHEEEEHHCCHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH KSDIPTLMCCLDYVMSEVVRRLVELAYKKGLISEKSAVGITGRAGITGRKPELIIEKLKT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LEIWDKVEENVVFVEDGLALGASVMARCMNCLGTPQVPIGGVRGGGCILGLRRKWQKERG HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCC MIRD CCCC >Mature Secondary Structure GIFDVISGLFKKKPKIAYAKSQSVDLIELKRNPYYIVASVELGNTTTKSIITATNMDTG CHHHHHHHHHHCCCCEEEECCCCCCEEEECCCCEEEEEEEEECCCCHHHEEEECCCCCC KTYIVSKHVKMTRDVRKPKKGEEVFGETLWGVELTREAVADMVKEVLLESLKKAGLTVDD CEEEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH LHFVVRSTGVTAGFASPEEVGEMIIALAQGCMKAGVPPAKMTPAMTKEQIPKPFDKYSFL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCHHHHHHH DKIIFDGAVTGVLPPTGKEVVANEMEGELVTAGIKVGSKWTDVDFRNPCMSIDFGTTLAG HHHHHCCCCCCCCCCCCHHHHHHHCCCCEEEEEEEECCEECCCCCCCCCEEEECCCCEEC RITNDTLPYAKVIGNLCGLAGAIADAIARGSGKIDEKTGAALDLANIKGKPNEELAKEYA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHH EEMHKYIIIKEVPKDVDRFGTVPVDPKSAEKAGTTLIGCDVGKNGSDLIKLEELGRELVE HHHHHEEEEHHCCHHHHHCCCCCCCCCCHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHH KSDIPTLMCCLDYVMSEVVRRLVELAYKKGLISEKSAVGITGRAGITGRKPELIIEKLKT HCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH LEIWDKVEENVVFVEDGLALGASVMARCMNCLGTPQVPIGGVRGGGCILGLRRKWQKERG HHHHHHHHCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEHHHHHHHHHCC MIRD CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087