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The map label for this gene is 15669625

Identifier: 15669625

GI number: 15669625

Start: 1403649

End: 1404311

Strand: Direct

Name: 15669625

Synonym: MJ1434

Alternate gene names: NA

Gene position: 1403649-1404311 (Clockwise)

Preceding gene: 15669624

Following gene: 15669626

Centisome position: 84.3

GC content: 30.02

Gene sequence:

>663_bases
ATGAAAGAGAACAAATTTGAGATGATATACAAAATATACAAAATTTTATTAGATTATTATGGACATCAAAATTGGTGGCC
TGCCGAAACAAGGTATGAGGTTGTCGTTGGAGCAATTTTAACTCAAAATACAAGTTGGAAAAATGTAGAGAGGGCTATAA
ATAATCTAAAGATGGAAGATTTGTTGGAAGAAGTAAAAATACTAAATGTTGATGAAGATAAACTAAAAGAACTTATAAGG
CCAGCTGGATTTTATAATTTAAAAGCTAAGCGTCTAAAAAATGTAACTAAATTTATTGTTGAAAATTATGGAAATACAGA
AGAGATGGCTAAGACAGATAAAGACACTTTAATATTAAGGGCTGAGCTCTTATCAATAAATGGAGTGGGAAAGGAAACAG
CTGATAGTATTTTGTTGTATGCATTAGATAGGGAGAGCTTTGTTGTTGATGCCTATACCAAAAGAATGTTTAGTAGGTTG
GGAGTAATTAACGAAAAAGCTAAATATGATGAGATTAAGGAAATATTTGAAAAAAATTTACCAAAAGATTTAGAAATATA
CAAAGAATATCACGCATTAATAGTAGAGCACTGTAAAAAGTTCTGTAGGAAAAAGGCATTATGTGATAACTGTCCAATTA
AAGAATTCTGCCTCTCAAAGTAA

Upstream 100 bases:

>100_bases
ACCTAATGCACTTAAAAGATAACTATCCATATCTGTATTCATTATGTTTAAGGGCAAATCCATTTGATAATAAGTCCATT
ATTATAGAGGAGGATGATAA

Downstream 100 bases:

>100_bases
TTTTTTGCTATCTTTAAAAAAGTATATATATGTGATTGAAAATTATAAGGGTTGATATTTATAAGATGTCAAAAGGTGGG
AGTAGATGAATAAGCCAGTA

Product: endonuclease III

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKENKFEMIYKIYKILLDYYGHQNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMEDLLEEVKILNVDEDKLKELIR
PAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILRAELLSINGVGKETADSILLYALDRESFVVDAYTKRMFSRL
GVINEKAKYDEIKEIFEKNLPKDLEIYKEYHALIVEHCKKFCRKKALCDNCPIKEFCLSK

Sequences:

>Translated_220_residues
MKENKFEMIYKIYKILLDYYGHQNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMEDLLEEVKILNVDEDKLKELIR
PAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILRAELLSINGVGKETADSILLYALDRESFVVDAYTKRMFSRL
GVINEKAKYDEIKEIFEKNLPKDLEIYKEYHALIVEHCKKFCRKKALCDNCPIKEFCLSK
>Mature_220_residues
MKENKFEMIYKIYKILLDYYGHQNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMEDLLEEVKILNVDEDKLKELIR
PAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILRAELLSINGVGKETADSILLYALDRESFVVDAYTKRMFSRL
GVINEKAKYDEIKEIFEKNLPKDLEIYKEYHALIVEHCKKFCRKKALCDNCPIKEFCLSK

Specific function: Unknown

COG id: COG2231

COG function: function code L; Uncharacterized protein related to Endonuclease III

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Nth/MutY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1434_METJA (Q58829)

Other databases:

- EMBL:   L77117
- PIR:   A64479
- RefSeq:   NP_248438.1
- ProteinModelPortal:   Q58829
- GeneID:   1452338
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1434
- NMPDR:   fig|243232.1.peg.1475
- TIGR:   MJ1434
- HOGENOM:   HBG464473
- OMA:   YHALIVE
- ProtClustDB:   CLSK876575
- BioCyc:   MJAN243232:MJ_1434-MONOMER
- InterPro:   IPR011257
- InterPro:   IPR003651
- InterPro:   IPR003265
- InterPro:   IPR003583
- InterPro:   IPR023170
- Gene3D:   G3DSA:1.10.340.30
- Gene3D:   G3DSA:1.10.1670.10
- SMART:   SM00478
- SMART:   SM00525
- SMART:   SM00278

Pfam domain/function: PF00730 HhH-GPD; SSF48150 DNA_glycsylse

EC number: 4.2.99.18

Molecular weight: Translated: 25938; Mature: 25938

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: PS00764 ENDONUCLEASE_III_1; PS01155 ENDONUCLEASE_III_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKENKFEMIYKIYKILLDYYGHQNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMED
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LLEEVKILNVDEDKLKELIRPAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILR
HHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
AELLSINGVGKETADSILLYALDRESFVVDAYTKRMFSRLGVINEKAKYDEIKEIFEKNL
HHHHHHCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PKDLEIYKEYHALIVEHCKKFCRKKALCDNCPIKEFCLSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC
>Mature Secondary Structure
MKENKFEMIYKIYKILLDYYGHQNWWPAETRYEVVVGAILTQNTSWKNVERAINNLKMED
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHCCCHHH
LLEEVKILNVDEDKLKELIRPAGFYNLKAKRLKNVTKFIVENYGNTEEMAKTDKDTLILR
HHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHH
AELLSINGVGKETADSILLYALDRESFVVDAYTKRMFSRLGVINEKAKYDEIKEIFEKNL
HHHHHHCCCCHHHHHHEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCC
PKDLEIYKEYHALIVEHCKKFCRKKALCDNCPIKEFCLSK
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087