| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669618
Identifier: 15669618
GI number: 15669618
Start: 1396645
End: 1397631
Strand: Direct
Name: 15669618
Synonym: MJ1427
Alternate gene names: NA
Gene position: 1396645-1397631 (Clockwise)
Preceding gene: 15669617
Following gene: 15669619
Centisome position: 83.88
GC content: 31.71
Gene sequence:
>987_bases TTGATAATTCAAACACCATCAAGGATTCACATGGGGCTTATAGATTTGAATGGTTCTATTGGAAGAGTTGATGGAGGTAT TGGTTTGGCTTTAGAGGAGCCAAATATAAAAATTGAAGGAAAAGAAAGTGATGATATATCCATTGAGTTTGATAAAAAAT TGATTGAAAAGTATGGAGAAGATTATATAAAATCTGTTAGAGATAGAGTATATAATACAGCTATCAAAGTTTTAGATGTT ATTGGTGGAGAGGGAGTTGATTTAAAAATCCTATCACTATTTCCAGCCCATTCTGGTCTTGGTAGTGGAACACAGCTATC TTTGGCTGTAGGTAAATTAATATCAAAAATATACAATAAAGAAATGAACGCCTACAATATTGCTAAAATTACTGGAAGGG GAGGGACTTCAGGCATTGGAATAGGGGCTTTTGAGTATGGAGGATTTTTAATTGATGGAGGGCATAGTTTTGGCAAGGGT AAGGATAAAGAAGATTTTAGACCTTCATCTGCTTCAAAAGGAGTTAAGCCAGCACCAATAATATTTAGACATGATTTTGA TTGGGAAACTATCTTAATAATTCCAAAAGGAGAACATGTCTATGGAAAAAAAGAAGTGGATATATTTAAAAAATACTGCC CAGTTCCTTTAAATGAAGTTGAAAAAATCTGCCATTTAGTTTTAATGAAGATGATGCCAGCAGTTGTTGAAAAAAATTTA GATGATTTTGGAGAAGTTATCAACAAGCTTCAATACTTAGGCTTTAAAAAAGTTGAACTCTCTTTACAATCAGATATTGT TAAAGATTTAATTAATGAATTGCATAAAGATGTTTATGCAGGACTTTCAAGCTTTGGCCCAACAATTTATGCATTTGGAG ACAAAAAATTAATTGTTGAAAAAGCCAACGATATTTTTGATAAATATGGAGTTTATGGAGAAATAATTATAACTAAAGCA AATAATGTGGGGCATAAAATTTGGTGA
Upstream 100 bases:
>100_bases TAAGCTTCAAACTTTTTATTTTTTGTTGTAAATATTTATAATTTATAGAACATCTGGTTGTTATTGTTATTATCTTTAAA ACCTTAATAATGGTGAGATT
Downstream 100 bases:
>100_bases TTCACAATGAACTTGTTCAGAAAGATAAGTGAAAAACTTAAATCCTATGAAGATTGGGTTACTGAGGCTAACTATTACTT AGATGAAGGAATATATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 328; Mature: 328
Protein sequence:
>328_residues MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGEDYIKSVRDRVYNTAIKVLDV IGGEGVDLKILSLFPAHSGLGSGTQLSLAVGKLISKIYNKEMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKG KDKEDFRPSSASKGVKPAPIIFRHDFDWETILIIPKGEHVYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAVVEKNL DDFGEVINKLQYLGFKKVELSLQSDIVKDLINELHKDVYAGLSSFGPTIYAFGDKKLIVEKANDIFDKYGVYGEIIITKA NNVGHKIW
Sequences:
>Translated_328_residues MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGEDYIKSVRDRVYNTAIKVLDV IGGEGVDLKILSLFPAHSGLGSGTQLSLAVGKLISKIYNKEMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKG KDKEDFRPSSASKGVKPAPIIFRHDFDWETILIIPKGEHVYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAVVEKNL DDFGEVINKLQYLGFKKVELSLQSDIVKDLINELHKDVYAGLSSFGPTIYAFGDKKLIVEKANDIFDKYGVYGEIIITKA NNVGHKIW >Mature_328_residues MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGEDYIKSVRDRVYNTAIKVLDV IGGEGVDLKILSLFPAHSGLGSGTQLSLAVGKLISKIYNKEMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKG KDKEDFRPSSASKGVKPAPIIFRHDFDWETILIIPKGEHVYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAVVEKNL DDFGEVINKLQYLGFKKVELSLQSDIVKDLINELHKDVYAGLSSFGPTIYAFGDKKLIVEKANDIFDKYGVYGEIIITKA NNVGHKIW
Specific function: Unknown
COG id: COG1907
COG function: function code R; Predicted archaeal sugar kinases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH830 and A.fulgidus AF2089
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1427_METJA (Q58822)
Other databases:
- EMBL: L77117 - PIR: B64478 - RefSeq: NP_248431.1 - ProteinModelPortal: Q58822 - GeneID: 1452331 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1427 - NMPDR: fig|243232.1.peg.1468 - TIGR: MJ1427 - HOGENOM: HBG549179 - OMA: LVLMKMM - ProtClustDB: CLSK876572 - BioCyc: MetaCyc:MONOMER-14546 - BioCyc: MJAN243232:MJ_1427-MONOMER - InterPro: IPR004422 - InterPro: IPR006204 - InterPro: IPR020568 - InterPro: IPR014721 - Gene3D: G3DSA:3.30.230.10 - PIRSF: PIRSF004884 - TIGRFAMs: TIGR00144
Pfam domain/function: PF00288 GHMP_kinases_N; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 36198; Mature: 36198
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGE CCCCCCCCEEEEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCEEEEHHHHHHHHHCH DYIKSVRDRVYNTAIKVLDVIGGEGVDLKILSLFPAHSGLGSGTQLSLAVGKLISKIYNK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC EMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKGKDKEDFRPSSASKGVKPAPI CCCCEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE IFRHDFDWETILIIPKGEHVYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAVVEKNL EEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DDFGEVINKLQYLGFKKVELSLQSDIVKDLINELHKDVYAGLSSFGPTIYAFGDKKLIVE HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEH KANDIFDKYGVYGEIIITKANNVGHKIW HHHHHHHHHCCEEEEEEEECCCCCCCCC >Mature Secondary Structure MIIQTPSRIHMGLIDLNGSIGRVDGGIGLALEEPNIKIEGKESDDISIEFDKKLIEKYGE CCCCCCCCEEEEEEEECCCEEEECCCEEEEEECCCEEECCCCCCCEEEEHHHHHHHHHCH DYIKSVRDRVYNTAIKVLDVIGGEGVDLKILSLFPAHSGLGSGTQLSLAVGKLISKIYNK HHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHC EMNAYNIAKITGRGGTSGIGIGAFEYGGFLIDGGHSFGKGKDKEDFRPSSASKGVKPAPI CCCCEEEEEEECCCCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCE IFRHDFDWETILIIPKGEHVYGKKEVDIFKKYCPVPLNEVEKICHLVLMKMMPAVVEKNL EEEECCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCH DDFGEVINKLQYLGFKKVELSLQSDIVKDLINELHKDVYAGLSSFGPTIYAFGDKKLIVE HHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEH KANDIFDKYGVYGEIIITKANNVGHKIW HHHHHHHHHCCEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087