| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is hflX [C]
Identifier: 15669598
GI number: 15669598
Start: 1368877
End: 1369929
Strand: Direct
Name: hflX [C]
Synonym: MJ1408
Alternate gene names: 15669598
Gene position: 1368877-1369929 (Clockwise)
Preceding gene: 15669597
Following gene: 15669601
Centisome position: 82.22
GC content: 33.05
Gene sequence:
>1053_bases ATGAGTAGAGAAGCTAATCCATTCAAAAAAATGCCAACAATATTGATGCCTGATGAATTGATGGCTAAAGCCTTAAGAAG AGGAGAAAAAGTAGCAAATGAGATGAGACAGAAAGAATTACCTTGGTTACTAAAAGCGAGGTTTGTGGAGGAGCATAAGG TAAGAACTATTGCTTCAGTTGTTGCAGATAACTTACAAAAGGTTATAGATAAAACGCCTCCAGTAAGAAAACTTCCTAAG TTTTATCAGGAGATGGTTGAGGTCTTGGTAGGGATAGATGATTTTAAAAAGTCGATGGGAGCATTTAAATGGGCTTCTGA ATTGGTCAGAAAATTAGGAAATGAATATGCAAGAAAAATTAGAAAGGCAAGAACTCCACAACAGGCAGGAAAGTTAAGAA AGGAATTTGTTGGTAGAGTTAAATCTATATTGGAGCAGATTCATCCAGAGATGGCATTTGTTGCAGTGGCAAGAGAGAAA TTAAAAGATTTACCAACATTTAAGGATTTGCCAACAGTAGTTATAGCTGGTTATCCAAACGTTGGTAAATCAACACTATT GAAAAAACTCACTGGAGCTGATGTTGAAATAAACAGCTATCCCTTCACAACTAAGGGAATAAATGTTGGTTATATAGGAG AGATTCAGATGGTCGATACTCCTGGACTGTTGGATAGGCCTCTGTATGAGAGGAATGATATTGAGTTACAGGCAATTTTA GCTCTAAATTATTTAGCTAATTTGATTTTATTTATAATAGATGCCAGTGAATTTTGTGGTTATACAATAGAAGAGCAAAT AAATCTATTAAAAGAGATAAAAGATTTGTTTAAAGCTCCTATTGTTGTGGCTATAAATAAAATTGATTTGGTAGATGAGG AGAGAGTTAAAGAGATTGAAGAAAAATTAAAAGAGGTTGGAATAGAAGAAATATTAAAAATCTCTGCTGATAAAGATATT GGATTGGATGAGTTAAAAGAAAGGCTTAAAAAAATTGCTATAAAAGAATTTTTAAAGGATAAAGATGCGGAAAATAAAGA ATTGGAATGTTAA
Upstream 100 bases:
>100_bases AATTTTAAATAAATGAAAATAAAAATCATTCTTTTATTAGAAGATTTATTTTAATTTTATTTTATCGATAAATCTATTAA AAACTTTTTTGGTGATAATT
Downstream 100 bases:
>100_bases ATTATTCATTCTCAATTTCATTTATTAAGTTTAAAGAGTCTATATCTCCATATTTATTGGCAATATCTTTAATTTTTTCA AGAACTTTTGGTTTTTTGTT
Product: GTP1/Obg family GTP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MSREANPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNLQKVIDKTPPVRKLPK FYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREK LKDLPTFKDLPTVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYIGEIQMVDTPGLLDRPLYERNDIELQAIL ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFKAPIVVAINKIDLVDEERVKEIEEKLKEVGIEEILKISADKDI GLDELKERLKKIAIKEFLKDKDAENKELEC
Sequences:
>Translated_350_residues MSREANPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNLQKVIDKTPPVRKLPK FYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREK LKDLPTFKDLPTVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYIGEIQMVDTPGLLDRPLYERNDIELQAIL ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFKAPIVVAINKIDLVDEERVKEIEEKLKEVGIEEILKISADKDI GLDELKERLKKIAIKEFLKDKDAENKELEC >Mature_349_residues SREANPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASVVADNLQKVIDKTPPVRKLPKF YQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKIRKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKL KDLPTFKDLPTVVIAGYPNVGKSTLLKKLTGADVEINSYPFTTKGINVGYIGEIQMVDTPGLLDRPLYERNDIELQAILA LNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFKAPIVVAINKIDLVDEERVKEIEEKLKEVGIEEILKISADKDIG LDELKERLKKIAIKEFLKDKDAENKELEC
Specific function: Unknown
COG id: COG1084
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP1/OBG family. NOG subfamily
Homologues:
Organism=Homo sapiens, GI55953087, Length=255, Percent_Identity=33.3333333333333, Blast_Score=163, Evalue=2e-40, Organism=Escherichia coli, GI1790615, Length=163, Percent_Identity=31.9018404907975, Blast_Score=65, Evalue=6e-12, Organism=Caenorhabditis elegans, GI25145602, Length=244, Percent_Identity=33.1967213114754, Blast_Score=165, Evalue=3e-41, Organism=Caenorhabditis elegans, GI25145600, Length=244, Percent_Identity=33.1967213114754, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6325164, Length=327, Percent_Identity=30.5810397553517, Blast_Score=170, Evalue=4e-43, Organism=Drosophila melanogaster, GI19921908, Length=307, Percent_Identity=34.5276872964169, Blast_Score=181, Evalue=6e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1408_METJA (Q58803)
Other databases:
- EMBL: L77117 - RefSeq: NP_248411.1 - ProteinModelPortal: Q58803 - SMR: Q58803 - GeneID: 1452311 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1408 - NMPDR: fig|243232.1.peg.1448 - TIGR: MJ1408 - HOGENOM: HBG626925 - OMA: FTTKGIN - ProtClustDB: CLSK876562 - BioCyc: MJAN243232:MJ_1408-MONOMER - InterPro: IPR006073 - InterPro: IPR010674 - InterPro: IPR005225 - PRINTS: PR00326 - TIGRFAMs: TIGR00231
Pfam domain/function: PF06858 NOG1
EC number: NA
Molecular weight: Translated: 40007; Mature: 39875
Theoretical pI: Translated: 9.12; Mature: 9.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSREANPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASV CCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VADNLQKVIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFKDLPTVVIAGYPN HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC VGKSTLLKKLTGADVEINSYPFTTKGINVGYIGEIQMVDTPGLLDRPLYERNDIELQAIL CCHHHHHHHHCCCCEEECCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHH ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFKAPIVVAINKIDLVDEERVKEIE HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHHHHH EKLKEVGIEEILKISADKDIGLDELKERLKKIAIKEFLKDKDAENKELEC HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure SREANPFKKMPTILMPDELMAKALRRGEKVANEMRQKELPWLLKARFVEEHKVRTIASV CCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH VADNLQKVIDKTPPVRKLPKFYQEMVEVLVGIDDFKKSMGAFKWASELVRKLGNEYARKI HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKARTPQQAGKLRKEFVGRVKSILEQIHPEMAFVAVAREKLKDLPTFKDLPTVVIAGYPN HHHCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCC VGKSTLLKKLTGADVEINSYPFTTKGINVGYIGEIQMVDTPGLLDRPLYERNDIELQAIL CCHHHHHHHHCCCCEEECCCCCEECCCCEEEEEEEEEECCCCCCCCCCCCCCCCHHHHHH ALNYLANLILFIIDASEFCGYTIEEQINLLKEIKDLFKAPIVVAINKIDLVDEERVKEIE HHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHCCHHEEEHHHCCCCHHHHHHHH EKLKEVGIEEILKISADKDIGLDELKERLKKIAIKEFLKDKDAENKELEC HHHHHHCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087