Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669560

Identifier: 15669560

GI number: 15669560

Start: 1319056

End: 1320042

Strand: Direct

Name: 15669560

Synonym: MJ1370

Alternate gene names: NA

Gene position: 1319056-1320042 (Clockwise)

Preceding gene: 15669559

Following gene: 15669561

Centisome position: 79.22

GC content: 32.32

Gene sequence:

>987_bases
ATGATAACCGTTGGAATAGACCATGGAACGTCGGGAATAACTACATGCATAAAAGATAATGATAAAAAGATAATATTTAA
ACTAAAGAGAACAGAACTCAAAGAAAAATCTTACTTAGAGGAGTTGGAGAAACATATTTCATTGGAAGATATTGATTTGA
TTGCTTTAACTTACTCAATGGGAGATGGGATAAACAAAATCCTACCAATAGAAAAAGTGAAAAATAGAGGAGTTTTAAGT
ATTGAAGGAGCTGGAGAAAAGGTTGGAGGAGGAACAAAGGTTTATGATGAGATTAAAGAATCTGGATTGCCAGCTGTTGT
TATTCCAGGATTGCATAGAGGAATAGAATGCTTAGATGAGAGGTTTAGAGCTTTATACTCCCATATAGCATCTCCAGAAA
AGGTTTCTATAGCTTATTATGCATATAAATTATTTGGATTTAATGATTTTGTTTTATCCGATATATCCTCAAATACTGTA
ACTTTATTAATAAAAGATGGTAAGATTTTTGGAGGATTTGATGCGTGTATTGGAGCTATTGGAATGTTACATGGCCCTAT
AGATTTAGAAATGATTAGAGATATAGATGCTGGAAAAATTACAGCAAATGAAGCATTTTCAAAGGCAGGGGCTGTTAAAA
TAGCCAAGCTCTATAAAGGTGTTGAAAATACAAAAGAAGAGATAATTAACAACTATTTTAATGATGAAAATTGTAGATTG
GCAGTTGATAGCTTAATTTTAAGTGTCTCTATGGAGATAAATAGCTTATTACCTTTATTGGATAAAAATAAAAGAAGAGT
GGTTTTAGCAGGTTCTATAGGGACTTTAAGGAATCCGATAGATATTCCAAAAAGAATTAAAGAGTTTGTTGAGGCAAAGA
TATTTGTCTTATATGGAGAAAGTGGGGCTATTGGGGGGGCTTTGATAGCAGAGGATATTTTAAAAGGGAAGAGAGATATT
TTAGGAATAGAAGTGGAGTTTAAGTGA

Upstream 100 bases:

>100_bases
TTGAACATCATGATTTTAATGAAATTTTAAAAGCCTTTCAAAAGAAATTTGGAATGATTTCTATAAAATAAAGAGAATTG
CATAAATTATTGGTGAAACT

Downstream 100 bases:

>100_bases
TAATTATGTATGCTATAGGCATAGGAGACAATAAAGAAGAAGTTTTGAAGGCTTATGAAAAATTAAAAGAAGAAGGAATA
GAGGTTGAATTAATTGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MITVGIDHGTSGITTCIKDNDKKIIFKLKRTELKEKSYLEELEKHISLEDIDLIALTYSMGDGINKILPIEKVKNRGVLS
IEGAGEKVGGGTKVYDEIKESGLPAVVIPGLHRGIECLDERFRALYSHIASPEKVSIAYYAYKLFGFNDFVLSDISSNTV
TLLIKDGKIFGGFDACIGAIGMLHGPIDLEMIRDIDAGKITANEAFSKAGAVKIAKLYKGVENTKEEIINNYFNDENCRL
AVDSLILSVSMEINSLLPLLDKNKRRVVLAGSIGTLRNPIDIPKRIKEFVEAKIFVLYGESGAIGGALIAEDILKGKRDI
LGIEVEFK

Sequences:

>Translated_328_residues
MITVGIDHGTSGITTCIKDNDKKIIFKLKRTELKEKSYLEELEKHISLEDIDLIALTYSMGDGINKILPIEKVKNRGVLS
IEGAGEKVGGGTKVYDEIKESGLPAVVIPGLHRGIECLDERFRALYSHIASPEKVSIAYYAYKLFGFNDFVLSDISSNTV
TLLIKDGKIFGGFDACIGAIGMLHGPIDLEMIRDIDAGKITANEAFSKAGAVKIAKLYKGVENTKEEIINNYFNDENCRL
AVDSLILSVSMEINSLLPLLDKNKRRVVLAGSIGTLRNPIDIPKRIKEFVEAKIFVLYGESGAIGGALIAEDILKGKRDI
LGIEVEFK
>Mature_328_residues
MITVGIDHGTSGITTCIKDNDKKIIFKLKRTELKEKSYLEELEKHISLEDIDLIALTYSMGDGINKILPIEKVKNRGVLS
IEGAGEKVGGGTKVYDEIKESGLPAVVIPGLHRGIECLDERFRALYSHIASPEKVSIAYYAYKLFGFNDFVLSDISSNTV
TLLIKDGKIFGGFDACIGAIGMLHGPIDLEMIRDIDAGKITANEAFSKAGAVKIAKLYKGVENTKEEIINNYFNDENCRL
AVDSLILSVSMEINSLLPLLDKNKRRVVLAGSIGTLRNPIDIPKRIKEFVEAKIFVLYGESGAIGGALIAEDILKGKRDI
LGIEVEFK

Specific function: Unknown

COG id: COG4020

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0285 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1370_METJA (Q58765)

Other databases:

- EMBL:   L77117
- PIR:   A64471
- RefSeq:   NP_248373.1
- ProteinModelPortal:   Q58765
- SMR:   Q58765
- GeneID:   1452273
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1370
- NMPDR:   fig|243232.1.peg.1410
- TIGR:   MJ1370
- HOGENOM:   HBG539696
- OMA:   DHGTSGI
- ProtClustDB:   PRK00976
- BioCyc:   MJAN243232:MJ_1370-MONOMER
- HAMAP:   MF_01087
- InterPro:   IPR016735
- PIRSF:   PIRSF018783
- TIGRFAMs:   TIGR03281

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35980; Mature: 35980

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITVGIDHGTSGITTCIKDNDKKIIFKLKRTELKEKSYLEELEKHISLEDIDLIALTYSM
CEEEEECCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
GDGINKILPIEKVKNRGVLSIEGAGEKVGGGTKVYDEIKESGLPAVVIPGLHRGIECLDE
CCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHH
RFRALYSHIASPEKVSIAYYAYKLFGFNDFVLSDISSNTVTLLIKDGKIFGGFDACIGAI
HHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEEEEEECCCEECCHHHHHHHH
GMLHGPIDLEMIRDIDAGKITANEAFSKAGAVKIAKLYKGVENTKEEIINNYFNDENCRL
HHHCCCCCHHHHHCCCCCCEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE
AVDSLILSVSMEINSLLPLLDKNKRRVVLAGSIGTLRNPIDIPKRIKEFVEAKIFVLYGE
EHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCEEEEEEECC
SGAIGGALIAEDILKGKRDILGIEVEFK
CCCCCHHHHHHHHHCCCCCEEEEEEEEC
>Mature Secondary Structure
MITVGIDHGTSGITTCIKDNDKKIIFKLKRTELKEKSYLEELEKHISLEDIDLIALTYSM
CEEEEECCCCCCEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEC
GDGINKILPIEKVKNRGVLSIEGAGEKVGGGTKVYDEIKESGLPAVVIPGLHRGIECLDE
CCCCCCCCCHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHHHHH
RFRALYSHIASPEKVSIAYYAYKLFGFNDFVLSDISSNTVTLLIKDGKIFGGFDACIGAI
HHHHHHHHHCCCCCEEEEEEEEEECCCCHHHHHCCCCCEEEEEEECCCEECCHHHHHHHH
GMLHGPIDLEMIRDIDAGKITANEAFSKAGAVKIAKLYKGVENTKEEIINNYFNDENCRL
HHHCCCCCHHHHHCCCCCCEEHHHHHHHCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCEE
AVDSLILSVSMEINSLLPLLDKNKRRVVLAGSIGTLRNPIDIPKRIKEFVEAKIFVLYGE
EHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHHHHHHHHCEEEEEEECC
SGAIGGALIAEDILKGKRDILGIEVEFK
CCCCCHHHHHHHHHCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087