| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
Click here to switch to the map view.
The map label for this gene is 15669551
Identifier: 15669551
GI number: 15669551
Start: 1310350
End: 1311228
Strand: Direct
Name: 15669551
Synonym: MJ1361
Alternate gene names: NA
Gene position: 1310350-1311228 (Clockwise)
Preceding gene: 15669546
Following gene: 161579521
Centisome position: 78.7
GC content: 32.08
Gene sequence:
>879_bases ATGAGAGCTTATCCCATCAAAACAAGATACATAAAAAGGGGAGAAAATTTTATCCCAATTGTTGTTGAAGCAATAAAAAA TAGTGGAATTAAATTAGAGGATGGAGATTTTGTAGTATTAAGTGAAAAGATGGTTTCAACTGCTGAGGGAAATTTTATTG ATGAGAGTAAATTTAAACCAGGAGTTTTAGCTTATCTCTGCTATTATTGGTCTAAATATCTTTGGGGCTATGTGCTTGGA AAGTTATTGAAAGTTAAAGAAGATAAAATAAAAAATTTGAGAAGAATGCCAAAGGAAGAGACTTTAAAGCATAAACAGAC AATTATAGAAATAGTTGGATTAAGATATGCCTTAAAACCTTATGCTGAAGGAGGAGTTGATTTAACAAACGTCCCTGGGA CTTATGCCTGTCCTCTCCCAAAAAATCCAAAAAAATGGGCTGAGGAGTTATATAAAGAGATAAAAAAAGAATTAGGTGTT GATGTTGTTGTTATGGTTGCCGATACTGATGCTACTTATAGAGTTTTGAATTTCTATTTTACCGCTCTTCCCTATGCAAT TGATGGAATAATAAGTGGTATTGGAGTTTTTGGTTTCATTCTTGGAAGGTTGGCAGATGTTTTAAAGATTGGTGGATTTG CTGGATGCACACCATTAGCAATAGCTGGAAATGAGGTATATAAAAAGTATTCTATTGGTGAGCTTACAAGGATAGCTTTT ATTTGTGATAGAGTGCATAAAACAATAAAAAACATTAATGAAGTTTTAGAAAAATACAACACCTATGTTATAACTGAAGA GATTTTGGAAAAATTGGAGCATACTCCAGTAGTAGTTGTTAAAATTAAGGAAGAGTATAAACCAGAATCTCAAAGATAA
Upstream 100 bases:
>100_bases AATTTGATTTTATCTAACAAAATAATAATTTATTAATTAGCCATATTTATAAATATCCTATTCAATATTGCTACGGTGAT ACACTTTAACATGTGAGAAT
Downstream 100 bases:
>100_bases TTTTTAAAATAATTATTATTGCTGTTTTAAGCATTTTCTCATAACTCATTAGATATTTTCTGAAATACTTTACCATCCAA GCAATGCAAATATAAAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MRAYPIKTRYIKRGENFIPIVVEAIKNSGIKLEDGDFVVLSEKMVSTAEGNFIDESKFKPGVLAYLCYYWSKYLWGYVLG KLLKVKEDKIKNLRRMPKEETLKHKQTIIEIVGLRYALKPYAEGGVDLTNVPGTYACPLPKNPKKWAEELYKEIKKELGV DVVVMVADTDATYRVLNFYFTALPYAIDGIISGIGVFGFILGRLADVLKIGGFAGCTPLAIAGNEVYKKYSIGELTRIAF ICDRVHKTIKNINEVLEKYNTYVITEEILEKLEHTPVVVVKIKEEYKPESQR
Sequences:
>Translated_292_residues MRAYPIKTRYIKRGENFIPIVVEAIKNSGIKLEDGDFVVLSEKMVSTAEGNFIDESKFKPGVLAYLCYYWSKYLWGYVLG KLLKVKEDKIKNLRRMPKEETLKHKQTIIEIVGLRYALKPYAEGGVDLTNVPGTYACPLPKNPKKWAEELYKEIKKELGV DVVVMVADTDATYRVLNFYFTALPYAIDGIISGIGVFGFILGRLADVLKIGGFAGCTPLAIAGNEVYKKYSIGELTRIAF ICDRVHKTIKNINEVLEKYNTYVITEEILEKLEHTPVVVVKIKEEYKPESQR >Mature_292_residues MRAYPIKTRYIKRGENFIPIVVEAIKNSGIKLEDGDFVVLSEKMVSTAEGNFIDESKFKPGVLAYLCYYWSKYLWGYVLG KLLKVKEDKIKNLRRMPKEETLKHKQTIIEIVGLRYALKPYAEGGVDLTNVPGTYACPLPKNPKKWAEELYKEIKKELGV DVVVMVADTDATYRVLNFYFTALPYAIDGIISGIGVFGFILGRLADVLKIGGFAGCTPLAIAGNEVYKKYSIGELTRIAF ICDRVHKTIKNINEVLEKYNTYVITEEILEKLEHTPVVVVKIKEEYKPESQR
Specific function: Unknown
COG id: COG4071
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1361_METJA (Q58756)
Other databases:
- EMBL: L77117 - PIR: H64469 - RefSeq: NP_248364.1 - ProteinModelPortal: Q58756 - GeneID: 1452263 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1361 - NMPDR: fig|243232.1.peg.1401 - TIGR: MJ1361 - HOGENOM: HBG541226 - OMA: WSKYLWG - ProtClustDB: CLSK876545 - BioCyc: MJAN243232:MJ_1361-MONOMER - InterPro: IPR002847 - InterPro: IPR012030 - PIRSF: PIRSF006563
Pfam domain/function: PF01996 F420_ligase
EC number: NA
Molecular weight: Translated: 33193; Mature: 33193
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xe9aa5f4)-;
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAYPIKTRYIKRGENFIPIVVEAIKNSGIKLEDGDFVVLSEKMVSTAEGNFIDESKFKP CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCCEEEEEHHHHHHHCCCCCCCCCCCC GVLAYLCYYWSKYLWGYVLGKLLKVKEDKIKNLRRMPKEETLKHKQTIIEIVGLRYALKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YAEGGVDLTNVPGTYACPLPKNPKKWAEELYKEIKKELGVDVVVMVADTDATYRVLNFYF HCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH TALPYAIDGIISGIGVFGFILGRLADVLKIGGFAGCTPLAIAGNEVYKKYSIGELTRIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCHHHHHHHHH ICDRVHKTIKNINEVLEKYNTYVITEEILEKLEHTPVVVVKIKEEYKPESQR HHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEEEECHHCCCCCCH >Mature Secondary Structure MRAYPIKTRYIKRGENFIPIVVEAIKNSGIKLEDGDFVVLSEKMVSTAEGNFIDESKFKP CCCCCCCHHHHHCCCCHHHHHHHHHHCCCCEECCCCEEEEEHHHHHHHCCCCCCCCCCCC GVLAYLCYYWSKYLWGYVLGKLLKVKEDKIKNLRRMPKEETLKHKQTIIEIVGLRYALKP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH YAEGGVDLTNVPGTYACPLPKNPKKWAEELYKEIKKELGVDVVVMVADTDATYRVLNFYF HCCCCCEEECCCCCEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHHHHH TALPYAIDGIISGIGVFGFILGRLADVLKIGGFAGCTPLAIAGNEVYKKYSIGELTRIAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHCHHHHHHHHH ICDRVHKTIKNINEVLEKYNTYVITEEILEKLEHTPVVVVKIKEEYKPESQR HHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHCCCCEEEEEECHHCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087