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The map label for this gene is rfaE [C]

Identifier: 15669527

GI number: 15669527

Start: 1284834

End: 1285280

Strand: Direct

Name: rfaE [C]

Synonym: MJ1336

Alternate gene names: 15669527

Gene position: 1284834-1285280 (Clockwise)

Preceding gene: 15669526

Following gene: 15669528

Centisome position: 77.17

GC content: 29.75

Gene sequence:

>447_bases
ATGGGTTATAATCAGCAATTGCTTAGGGTTGATTATGAAAAAATCTATCCAATAAACGATGAGTTAAGCAGTAAAATTTT
GGGAGTTATTAAAAATCTCAATGGAAAATCAGATATATTAGTAATCTCTGATTATGCAAAGGGATTAATTACAAAGGAAC
TCATGGATGACATAAAAAAAGAATTTAAGGGAAAAATCTTAATTGACCCAAAACCAAAAAATGACTTTTATAAGGATGTC
TATTTAATAAAACCGAATCTAAAAGAGGCTTCCCAAATTTTAGGAAGGGAGATAGAAAATAAAGATGATGAGTTGGAAAA
ATCTGGATTGGAATCAGTTGATAAATACAATTCAAACTTTGTTATAACGAGAGGTGAAAAAGGAGCTACATTAATAACTG
TTGATGAAATATTTACCATGTTCCAACAGAAGTCAAAGAGGTCATGA

Upstream 100 bases:

>100_bases
TGTGAGGAGGTTGAGAAAAAATTGGTGAAATAGATGATAATTGAAGATAGAGAAACGTTAAAAAAGAAGGCCAACAATAG
TAAAGCATAGATTTGTTGCT

Downstream 100 bases:

>100_bases
TGTTTCAGGGGCTGGAGATACATTTATCGCAGTTTTGGGCTATGCGTTAGAGAAGGGCGTTTGAAAAAGCTAAGGAGTTA
GTTAATACTCAAAATGAATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 147

Protein sequence:

>148_residues
MGYNQQLLRVDYEKIYPINDELSSKILGVIKNLNGKSDILVISDYAKGLITKELMDDIKKEFKGKILIDPKPKNDFYKDV
YLIKPNLKEASQILGREIENKDDELEKSGLESVDKYNSNFVITRGEKGATLITVDEIFTMFQQKSKRS

Sequences:

>Translated_148_residues
MGYNQQLLRVDYEKIYPINDELSSKILGVIKNLNGKSDILVISDYAKGLITKELMDDIKKEFKGKILIDPKPKNDFYKDV
YLIKPNLKEASQILGREIENKDDELEKSGLESVDKYNSNFVITRGEKGATLITVDEIFTMFQQKSKRS
>Mature_147_residues
GYNQQLLRVDYEKIYPINDELSSKILGVIKNLNGKSDILVISDYAKGLITKELMDDIKKEFKGKILIDPKPKNDFYKDVY
LIKPNLKEASQILGREIENKDDELEKSGLESVDKYNSNFVITRGEKGATLITVDEIFTMFQQKSKRS

Specific function: Lipopolysaccharide core biosynthesis. [C]

COG id: COG2870

COG function: function code M; ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1336_METJA (Q58732)

Other databases:

- EMBL:   L77117
- PIR:   G64466
- RefSeq:   NP_248338.1
- ProteinModelPortal:   Q58732
- GeneID:   1452239
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1336
- NMPDR:   fig|243232.1.peg.1375
- TIGR:   MJ1336
- BioCyc:   MJAN243232:MJ_1336-MONOMER
- InterPro:   IPR011611

Pfam domain/function: PF00294 PfkB

EC number: 2.7.-.- [C]

Molecular weight: Translated: 17013; Mature: 16882

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGYNQQLLRVDYEKIYPINDELSSKILGVIKNLNGKSDILVISDYAKGLITKELMDDIKK
CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHH
EFKGKILIDPKPKNDFYKDVYLIKPNLKEASQILGREIENKDDELEKSGLESVDKYNSNF
HHCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE
VITRGEKGATLITVDEIFTMFQQKSKRS
EEEECCCCCEEEEHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GYNQQLLRVDYEKIYPINDELSSKILGVIKNLNGKSDILVISDYAKGLITKELMDDIKK
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHHHHHHHH
EFKGKILIDPKPKNDFYKDVYLIKPNLKEASQILGREIENKDDELEKSGLESVDKYNSNF
HHCCCEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCE
VITRGEKGATLITVDEIFTMFQQKSKRS
EEEECCCCCEEEEHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087