Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

Click here to switch to the map view.

The map label for this gene is 15669520

Identifier: 15669520

GI number: 15669520

Start: 1280407

End: 1280790

Strand: Direct

Name: 15669520

Synonym: MJ1330

Alternate gene names: NA

Gene position: 1280407-1280790 (Clockwise)

Preceding gene: 15669519

Following gene: 15669523

Centisome position: 76.9

GC content: 35.68

Gene sequence:

>384_bases
TTGGATGCTGGAATGGATTTATATATTGGGAGTAATGAAGAAAGAGACAGAGTTAAAGAGAAACTTAAGGAGATTTTGTT
AAAGCAGTTGTCTAACCCTAATGTCTCAACTTTGTTAATTGCAGCAATTTTGTTGGATAATGAAGGCAGAGCTAACAATC
TGCCATTCAACTACAACGAAGACCCAAACTATGTGTATGTTGATGAGGTTATTGGATTAGCTATAGCAAATGAGATTGCT
GGAACTAAGGCAATATTTAACTTTAGATTCTATGATGCTAAAAAACCCGGAATAATTGGAGAGTTAGATAGGAAAGGCTT
TATGTTCTTAGATGATGCTATAGCCGGTTTGTTGGCTGGGTGTATGAGTAAGGTGTTTGAATAA

Upstream 100 bases:

>100_bases
ATGTTTATTATAAGAGATATGCCCATAAAATCCAAAATATTAAAGTGAGAAAATGATTATTAAAAAATTAGAGGAGTTTG
GAATAACTATTGACAGCTTA

Downstream 100 bases:

>100_bases
AGTTAAACTTCAAAGGTATCTTTCAATATGTCTCTAATCTCCTCTGAAACTTTTATTTGCTTCTCTAAGGCATTAAAAAT
ATTCTCTAAATAGCTAATTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MDAGMDLYIGSNEERDRVKEKLKEILLKQLSNPNVSTLLIAAILLDNEGRANNLPFNYNEDPNYVYVDEVIGLAIANEIA
GTKAIFNFRFYDAKKPGIIGELDRKGFMFLDDAIAGLLAGCMSKVFE

Sequences:

>Translated_127_residues
MDAGMDLYIGSNEERDRVKEKLKEILLKQLSNPNVSTLLIAAILLDNEGRANNLPFNYNEDPNYVYVDEVIGLAIANEIA
GTKAIFNFRFYDAKKPGIIGELDRKGFMFLDDAIAGLLAGCMSKVFE
>Mature_127_residues
MDAGMDLYIGSNEERDRVKEKLKEILLKQLSNPNVSTLLIAAILLDNEGRANNLPFNYNEDPNYVYVDEVIGLAIANEIA
GTKAIFNFRFYDAKKPGIIGELDRKGFMFLDDAIAGLLAGCMSKVFE

Specific function: Unknown

COG id: COG1267

COG function: function code I; Phosphatidylglycerophosphatase A and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1330_METJA (Q58726)

Other databases:

- EMBL:   L77117
- PIR:   A64466
- RefSeq:   NP_248331.1
- ProteinModelPortal:   Q58726
- SMR:   Q58726
- GeneID:   1452232
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1330
- NMPDR:   fig|243232.1.peg.1368
- TIGR:   MJ1330
- HOGENOM:   HBG538966
- OMA:   KKPGIIG
- ProtClustDB:   CLSK876532
- BioCyc:   MJAN243232:MJ_1330-MONOMER
- InterPro:   IPR007686

Pfam domain/function: PF04608 PgpA; SSF101307 PgpA

EC number: NA

Molecular weight: Translated: 14151; Mature: 14151

Theoretical pI: Translated: 4.39; Mature: 4.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAGMDLYIGSNEERDRVKEKLKEILLKQLSNPNVSTLLIAAILLDNEGRANNLPFNYNE
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
DPNYVYVDEVIGLAIANEIAGTKAIFNFRFYDAKKPGIIGELDRKGFMFLDDAIAGLLAG
CCCEEEHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CMSKVFE
HHHHHCC
>Mature Secondary Structure
MDAGMDLYIGSNEERDRVKEKLKEILLKQLSNPNVSTLLIAAILLDNEGRANNLPFNYNE
CCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC
DPNYVYVDEVIGLAIANEIAGTKAIFNFRFYDAKKPGIIGELDRKGFMFLDDAIAGLLAG
CCCEEEHHHHHHHHHHHHHCCCHHEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH
CMSKVFE
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087