| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669508
Identifier: 15669508
GI number: 15669508
Start: 1263055
End: 1264863
Strand: Reverse
Name: 15669508
Synonym: MJ1318
Alternate gene names: NA
Gene position: 1264863-1263055 (Counterclockwise)
Preceding gene: 15669510
Following gene: 15669507
Centisome position: 75.97
GC content: 32.89
Gene sequence:
>1809_bases ATGAAGACTTGGAGGGAGAATATGAAAAAAATATTGACATTGCTATTAATAACATTTCTTTTAAATTCTGCTTTTGCTGT GATTATAAAAGCTCCAGCAGTATCTTTAACGGATAGAGGATACGTGGGGGTTCCAATAAATATTCAAATTAATGTTACGA AGGGAGATGGACATGTATTTATGGACACTATGCCTCTAACTGAATTAGATATGCAAGGTTCTGCAAGAATCGCTGCAAAA GTTGCTGGGGAAGTTACTGGAAAAGATATGAGTAAATATAATGTATATATCACAGTAAGAAGTGATGTTCCAGTTGTTGG GGGGCCATCAGCAGGGGGAACGATGACTATTGGAATCATCTGTGAGTTGATGAACTGGAGTTTAAATAAACATGTTATGA TGACTGGAACGATAAATCCGGATGGTAGTATAGGACCTGTTGGAGGGATATTGGAAAAGATAGAAGCTGCTAAGAAAGCA AACTGCACAATTATGCTAATCCCAAAAGGGCAGAGGTATGTTGAAGTAGAGGGCAACAAAGTTGATGCAGTAGAATTTGG TAAAAAATTGGGAATTAAGGTTATAGAAGTTGGAAGTATATATGAAGCGATTCCTTACTTCACAAATAAAAAGATAATAA TGAAGGAATATCCAGAAAATCCACTTATCGAAGAGAAATATAAAGACATAATGAAGGAGTTAAGTGAAAACGTTTTAAAA ACAGCTAATGAAAAATATGAAAACCTCTCTAAAGAGTTAAGTAACAGTTATGTTGGATATGAATATCAAAAAGCCCTGTT AAATGAACTAACTACCTCAAAGAGCTTATTAGAGAAGGCTAATGATGAATATCTAAAAAACAAATACTACTCTGCAACAT GCTCTGCGTTTAACGCATTAATTAAACTTGAAACTATTGAACACACCCTAAAATACTTAACTGGAGAGGAAGATGTTAAA ACTTTCTTAACAGAGGTTCAAAATAAAATTAGCCATGATAAAGAAATTGTTTATTCAAAAAATGTAACTACTAACAACTT TGAAGAGATATTGGCAGGAAGGATAAGAATTGCTGAAGCGGAAAAACTCTTAGATAATGCGTGGAAATCTTACTATTTAG GAAATTATGATGAAGCGATAAAGTATGGTAGCTTTGCGAAGTTGAGGGGAGATAGTGCAATATGGTGGGTTTCTTTAAAA GAAAATGATAACAATGGCAAGATAATAAATGAAGCTAAATTAAAATCATTAGCTCAGCAGTATTTAGACAACGCTGAAAC AATCTTAACTTATGTAGAAACATTATTCCCCAATCTACCTACTGATGACCTTGAAAATGATTTAGAATCAGCAAAAGAGG CATATAAGGATGGGGACTATTTACTAACCATAGCTGAGAGTATAGATACCTGTGTAAAGGCAGAGATTCCATTGGTTATA TTTGGAGATATTGAATACTCCAAAAAATATGCAAGGAACAAAATAAACTTGGCTGAAAACTTAGGAATAACTCCAATCTC AGCCCTTGGTTATTATGAATATGCAAATAGTTTAAATGATACCATTTCAAAAATTATGTATTATAAATATAGCTCATACT ACGCCCAAATGGATATAGATGTAATAAAAGAGTTGAATAAAAGTATCAGTGAAAATATCAGCAGTGAAATTAATATAGTC ACTAACGAGAATGTTAATATTGAAGAAACTACAACTAAGGAAAATAATGTTGGAATAATGATTTCTGCAATAATTGGTGG ATTAATAGGGTTTGCAGGAGGATACTTAGCAAGAAGAGTTTCTGCTTAA
Upstream 100 bases:
>100_bases ATAACTCACACTACTTTTACTTTATACTTTAATTTCATACTATTTTTTATATTTGTTCTGAGTAATTATTTAAGTATTAT CTGAAGTATAATGTATCCTT
Downstream 100 bases:
>100_bases TTAACTTTTTATATTTATTTTTTAGTTTATTTTTATTATTTTTTATGGTGAGAAAAGTGGCAGAACAAAATTTACAAAAA AATAATGAGAATGATAGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MKTWRENMKKILTLLLITFLLNSAFAVIIKAPAVSLTDRGYVGVPINIQINVTKGDGHVFMDTMPLTELDMQGSARIAAK VAGEVTGKDMSKYNVYITVRSDVPVVGGPSAGGTMTIGIICELMNWSLNKHVMMTGTINPDGSIGPVGGILEKIEAAKKA NCTIMLIPKGQRYVEVEGNKVDAVEFGKKLGIKVIEVGSIYEAIPYFTNKKIIMKEYPENPLIEEKYKDIMKELSENVLK TANEKYENLSKELSNSYVGYEYQKALLNELTTSKSLLEKANDEYLKNKYYSATCSAFNALIKLETIEHTLKYLTGEEDVK TFLTEVQNKISHDKEIVYSKNVTTNNFEEILAGRIRIAEAEKLLDNAWKSYYLGNYDEAIKYGSFAKLRGDSAIWWVSLK ENDNNGKIINEAKLKSLAQQYLDNAETILTYVETLFPNLPTDDLENDLESAKEAYKDGDYLLTIAESIDTCVKAEIPLVI FGDIEYSKKYARNKINLAENLGITPISALGYYEYANSLNDTISKIMYYKYSSYYAQMDIDVIKELNKSISENISSEINIV TNENVNIEETTTKENNVGIMISAIIGGLIGFAGGYLARRVSA
Sequences:
>Translated_602_residues MKTWRENMKKILTLLLITFLLNSAFAVIIKAPAVSLTDRGYVGVPINIQINVTKGDGHVFMDTMPLTELDMQGSARIAAK VAGEVTGKDMSKYNVYITVRSDVPVVGGPSAGGTMTIGIICELMNWSLNKHVMMTGTINPDGSIGPVGGILEKIEAAKKA NCTIMLIPKGQRYVEVEGNKVDAVEFGKKLGIKVIEVGSIYEAIPYFTNKKIIMKEYPENPLIEEKYKDIMKELSENVLK TANEKYENLSKELSNSYVGYEYQKALLNELTTSKSLLEKANDEYLKNKYYSATCSAFNALIKLETIEHTLKYLTGEEDVK TFLTEVQNKISHDKEIVYSKNVTTNNFEEILAGRIRIAEAEKLLDNAWKSYYLGNYDEAIKYGSFAKLRGDSAIWWVSLK ENDNNGKIINEAKLKSLAQQYLDNAETILTYVETLFPNLPTDDLENDLESAKEAYKDGDYLLTIAESIDTCVKAEIPLVI FGDIEYSKKYARNKINLAENLGITPISALGYYEYANSLNDTISKIMYYKYSSYYAQMDIDVIKELNKSISENISSEINIV TNENVNIEETTTKENNVGIMISAIIGGLIGFAGGYLARRVSA >Mature_602_residues MKTWRENMKKILTLLLITFLLNSAFAVIIKAPAVSLTDRGYVGVPINIQINVTKGDGHVFMDTMPLTELDMQGSARIAAK VAGEVTGKDMSKYNVYITVRSDVPVVGGPSAGGTMTIGIICELMNWSLNKHVMMTGTINPDGSIGPVGGILEKIEAAKKA NCTIMLIPKGQRYVEVEGNKVDAVEFGKKLGIKVIEVGSIYEAIPYFTNKKIIMKEYPENPLIEEKYKDIMKELSENVLK TANEKYENLSKELSNSYVGYEYQKALLNELTTSKSLLEKANDEYLKNKYYSATCSAFNALIKLETIEHTLKYLTGEEDVK TFLTEVQNKISHDKEIVYSKNVTTNNFEEILAGRIRIAEAEKLLDNAWKSYYLGNYDEAIKYGSFAKLRGDSAIWWVSLK ENDNNGKIINEAKLKSLAQQYLDNAETILTYVETLFPNLPTDDLENDLESAKEAYKDGDYLLTIAESIDTCVKAEIPLVI FGDIEYSKKYARNKINLAENLGITPISALGYYEYANSLNDTISKIMYYKYSSYYAQMDIDVIKELNKSISENISSEINIV TNENVNIEETTTKENNVGIMISAIIGGLIGFAGGYLARRVSA
Specific function: Unknown
COG id: COG1750
COG function: function code R; Archaeal serine proteases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1318_METJA (Q58714)
Other databases:
- EMBL: L77117 - PIR: E64464 - RefSeq: NP_248318.1 - ProteinModelPortal: Q58714 - SMR: Q58714 - GeneID: 1452220 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1318 - NMPDR: fig|243232.1.peg.1355 - TIGR: MJ1318 - HOGENOM: HBG645387 - OMA: VMMTGMI - ProtClustDB: CLSK876525 - BioCyc: MJAN243232:MJ_1318-MONOMER - GO: GO:0006508 - InterPro: IPR008269 - InterPro: IPR001984 - InterPro: IPR020568 - PRINTS: PR00830
Pfam domain/function: PF05362 Lon_C; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 67258; Mature: 67258
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xc437c94)-; HASH(0xe656e2c)-; HASH(0xcc991e0)-;
Cys/Met content:
0.7 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTWRENMKKILTLLLITFLLNSAFAVIIKAPAVSLTDRGYVGVPINIQINVTKGDGHVF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEEEEEEEEECCCEEE MDTMPLTELDMQGSARIAAKVAGEVTGKDMSKYNVYITVRSDVPVVGGPSAGGTMTIGII EECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEHHHH CELMNWSLNKHVMMTGTINPDGSIGPVGGILEKIEAAKKANCTIMLIPKGQRYVEVEGNK HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCE VDAVEFGKKLGIKVIEVGSIYEAIPYFTNKKIIMKEYPENPLIEEKYKDIMKELSENVLK ECHHHHHHHCCEEEEEECHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TANEKYENLSKELSNSYVGYEYQKALLNELTTSKSLLEKANDEYLKNKYYSATCSAFNAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH IKLETIEHTLKYLTGEEDVKTFLTEVQNKISHDKEIVYSKNVTTNNFEEILAGRIRIAEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH EKLLDNAWKSYYLGNYDEAIKYGSFAKLRGDSAIWWVSLKENDNNGKIINEAKLKSLAQQ HHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCEEEEEEEEECCCCCCEECHHHHHHHHHH YLDNAETILTYVETLFPNLPTDDLENDLESAKEAYKDGDYLLTIAESIDTCVKAEIPLVI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEE FGDIEYSKKYARNKINLAENLGITPISALGYYEYANSLNDTISKIMYYKYSSYYAQMDID ECCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH VIKELNKSISENISSEINIVTNENVNIEETTTKENNVGIMISAIIGGLIGFAGGYLARRV HHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHC SA CH >Mature Secondary Structure MKTWRENMKKILTLLLITFLLNSAFAVIIKAPAVSLTDRGYVGVPINIQINVTKGDGHVF CCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCEEEEEEEEEEEEEECCCEEE MDTMPLTELDMQGSARIAAKVAGEVTGKDMSKYNVYITVRSDVPVVGGPSAGGTMTIGII EECCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEEEEEEECCCCEECCCCCCCEEEHHHH CELMNWSLNKHVMMTGTINPDGSIGPVGGILEKIEAAKKANCTIMLIPKGQRYVEVEGNK HHHHCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCEEEEECCCE VDAVEFGKKLGIKVIEVGSIYEAIPYFTNKKIIMKEYPENPLIEEKYKDIMKELSENVLK ECHHHHHHHCCEEEEEECHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH TANEKYENLSKELSNSYVGYEYQKALLNELTTSKSLLEKANDEYLKNKYYSATCSAFNAL HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHCHHHHHHHHHHHH IKLETIEHTLKYLTGEEDVKTFLTEVQNKISHDKEIVYSKNVTTNNFEEILAGRIRIAEA HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHH EKLLDNAWKSYYLGNYDEAIKYGSFAKLRGDSAIWWVSLKENDNNGKIINEAKLKSLAQQ HHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCEEEEEEEEECCCCCCEECHHHHHHHHHH YLDNAETILTYVETLFPNLPTDDLENDLESAKEAYKDGDYLLTIAESIDTCVKAEIPLVI HHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCEEE FGDIEYSKKYARNKINLAENLGITPISALGYYEYANSLNDTISKIMYYKYSSYYAQMDID ECCCHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHH VIKELNKSISENISSEINIVTNENVNIEETTTKENNVGIMISAIIGGLIGFAGGYLARRV HHHHHHHHHHHCCCCCEEEEECCCCCEEECCCCCCCCCEEHHHHHHHHHHHHHHHHHHHC SA CH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087