Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669493

Identifier: 15669493

GI number: 15669493

Start: 1250652

End: 1252157

Strand: Reverse

Name: 15669493

Synonym: MJ1303

Alternate gene names: NA

Gene position: 1252157-1250652 (Counterclockwise)

Preceding gene: 15669494

Following gene: 15669492

Centisome position: 75.21

GC content: 35.39

Gene sequence:

>1506_bases
TTGAGGGGAGGAAGGATGATTATAACTATATTAGATGAATGTAGGGTAGAGGAGAAATGCCAATCCTGTCCTTTCTCACA
AACATCCAAGTGTATGGAAGCTTGTCCAACAGATGCAATATTTTTATTAAATAATAAAAGTTTTAGCTGTTTAACATGCG
GAGAGTGTGCAAGAAACTGCCCAAACAAGGCAATTAAGAGGAATGAGTTTGGAGGCTATTATGTAGATAGAAGGAGATGT
AACGGTTGCGGTATATGTGCCAACGTCTGCCCAATTGGAATTATAAAGATTGTAGAGAAAGATGGAAAAAAATTCCCAAT
GGGAATTTGCTCAATGTGTGGCGTCTGTGTTGAGGTTTGCCCTTACAATGCAAGAGTTAGCTCTTATGAATTGTTAAACA
CAAAGAGAGAAGGCTTAGCAGAGAGATACTTAAAAGTTTTAGAGAATCTTATGAAAGTTAAATTATTTAGAGCTGAAGAA
AAACCAGGAAAAGTTGTTGAAAAAGTAGAAAGGAAATCTATTAAAATTGATAGAGATAAATGCGTTGGATGCTTAAGATG
CTCTTATTTATGTCCAAGAGATACTATAGTCCCAGATTCTATAGATGCATGCACATCCTGCAATTTGTGTGGAGAGAACT
GCCCAAAAGATGCCATTAAAGATGGAGAAGTAGATTATAATAAATGCATTCTCTGTTTAAAATGTGTTGAAATCTGCCCT
AACGATGCTTTAAAAGTTGAAAACTTTAAAGTTATTAAAGTTAAGGAAGATAAAACATCCCAACCAACAAGTTATTGTAT
AAATTGTGGGTTGTGTGCTGAACACTGCCCAAGTGGAGCTTTAAGGTTTGAGAATGGACATCTATATTACAGCCCAGATG
TTTGTTGGAAATGTATGGAATGCGTTAAAATCTGCCCTAACGATGTTAGAAGAATTAAACAGGACTTTCGCAGATTATAC
ATCCATAAAGGAAATTTGATGCCAAAGGCATCTATGGGCAATAATAAACTTTACTCCTGCGAAAGTCCTGTAGATGATAG
AGTTGTTGGAGGCTGCTCTCTATGTGAAATTTGTATAAATAACTGTCCAGAAGAAGCAATATCAATAACAACAGTTAAAT
TGGAGAAAATTAAAGATGAAAACTGCATACTCTGTGGAACATGCTCAAATGTATGTCCAAGAGACGCTATAATAATAGAC
AGAAGTAATGGAGAGGTTTTATTTACTGATAATTGCATAGCTTGTGAAACATGTGCTATTCACTGCCCAAGAGATGTGAT
TCCAAACACAACTGGCTATAAAAAGGTTGTTGATAGAGAAAACTCATTTATTAGAACTGATATGGACTTCTGTATAAAGT
GTGGTCTCTGCAACAAGGTCTGCCCAAATAATTGCATTGATTATGGAGTTATTGATAAAGAGAGATGTGAGTTCTGTGGA
GCTTGCTACAATATTTGCCCAACTAAAGCGATATATCTACATAGAAAATGGAAAGTGAAAGAATAA

Upstream 100 bases:

>100_bases
AATATACTAAAGAAGATGCTGAAGAATGTTTAAAAGATGCTGAAAATGTGTTGGAAGTAATTAAAGACTTTTTAAAAGAG
AAATATGGCTTAAAACAAAT

Downstream 100 bases:

>100_bases
AATTTTGGTGATTGAGTTGGCTGAACTAAAGAACTTTGCCAAGATATTTTTAACCGGGATATATGAAAATTTGGAGAGAA
TTATCTTTGGGTCTGGAAGA

Product: polyferredoxin MvhB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 501

Protein sequence:

>501_residues
MRGGRMIITILDECRVEEKCQSCPFSQTSKCMEACPTDAIFLLNNKSFSCLTCGECARNCPNKAIKRNEFGGYYVDRRRC
NGCGICANVCPIGIIKIVEKDGKKFPMGICSMCGVCVEVCPYNARVSSYELLNTKREGLAERYLKVLENLMKVKLFRAEE
KPGKVVEKVERKSIKIDRDKCVGCLRCSYLCPRDTIVPDSIDACTSCNLCGENCPKDAIKDGEVDYNKCILCLKCVEICP
NDALKVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFENGHLYYSPDVCWKCMECVKICPNDVRRIKQDFRRLY
IHKGNLMPKASMGNNKLYSCESPVDDRVVGGCSLCEICINNCPEEAISITTVKLEKIKDENCILCGTCSNVCPRDAIIID
RSNGEVLFTDNCIACETCAIHCPRDVIPNTTGYKKVVDRENSFIRTDMDFCIKCGLCNKVCPNNCIDYGVIDKERCEFCG
ACYNICPTKAIYLHRKWKVKE

Sequences:

>Translated_501_residues
MRGGRMIITILDECRVEEKCQSCPFSQTSKCMEACPTDAIFLLNNKSFSCLTCGECARNCPNKAIKRNEFGGYYVDRRRC
NGCGICANVCPIGIIKIVEKDGKKFPMGICSMCGVCVEVCPYNARVSSYELLNTKREGLAERYLKVLENLMKVKLFRAEE
KPGKVVEKVERKSIKIDRDKCVGCLRCSYLCPRDTIVPDSIDACTSCNLCGENCPKDAIKDGEVDYNKCILCLKCVEICP
NDALKVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFENGHLYYSPDVCWKCMECVKICPNDVRRIKQDFRRLY
IHKGNLMPKASMGNNKLYSCESPVDDRVVGGCSLCEICINNCPEEAISITTVKLEKIKDENCILCGTCSNVCPRDAIIID
RSNGEVLFTDNCIACETCAIHCPRDVIPNTTGYKKVVDRENSFIRTDMDFCIKCGLCNKVCPNNCIDYGVIDKERCEFCG
ACYNICPTKAIYLHRKWKVKE
>Mature_501_residues
MRGGRMIITILDECRVEEKCQSCPFSQTSKCMEACPTDAIFLLNNKSFSCLTCGECARNCPNKAIKRNEFGGYYVDRRRC
NGCGICANVCPIGIIKIVEKDGKKFPMGICSMCGVCVEVCPYNARVSSYELLNTKREGLAERYLKVLENLMKVKLFRAEE
KPGKVVEKVERKSIKIDRDKCVGCLRCSYLCPRDTIVPDSIDACTSCNLCGENCPKDAIKDGEVDYNKCILCLKCVEICP
NDALKVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFENGHLYYSPDVCWKCMECVKICPNDVRRIKQDFRRLY
IHKGNLMPKASMGNNKLYSCESPVDDRVVGGCSLCEICINNCPEEAISITTVKLEKIKDENCILCGTCSNVCPRDAIIID
RSNGEVLFTDNCIACETCAIHCPRDVIPNTTGYKKVVDRENSFIRTDMDFCIKCGLCNKVCPNNCIDYGVIDKERCEFCG
ACYNICPTKAIYLHRKWKVKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 13 4Fe-4S ferredoxin-type domains

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1303_METJA (Q58699)

Other databases:

- EMBL:   L77117
- PIR:   F64462
- RefSeq:   NP_248303.1
- ProteinModelPortal:   Q58699
- GeneID:   1452205
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1303
- NMPDR:   fig|243232.1.peg.1340
- TIGR:   MJ1303
- HOGENOM:   HBG538963
- OMA:   CAIHCPR
- ProtClustDB:   CLSK876520
- BioCyc:   MJAN243232:MJ_1303-MONOMER
- GO:   GO:0006810
- InterPro:   IPR001450
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285
- Gene3D:   G3DSA:1.10.1060.10

Pfam domain/function: PF00037 Fer4

EC number: NA

Molecular weight: Translated: 56297; Mature: 56297

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: PS00198 4FE4S_FER_1; PS51379 4FE4S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

11.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
13.8 %Cys+Met (Translated Protein)
11.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
13.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGGRMIITILDECRVEEKCQSCPFSQTSKCMEACPTDAIFLLNNKSFSCLTCGECARNC
CCCCEEEEEEHHHCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHC
PNKAIKRNEFGGYYVDRRRCNGCGICANVCPIGIIKIVEKDGKKFPMGICSMCGVCVEVC
CHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC
PYNARVSSYELLNTKREGLAERYLKVLENLMKVKLFRAEEKPGKVVEKVERKSIKIDRDK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEECHHH
CVGCLRCSYLCPRDTIVPDSIDACTSCNLCGENCPKDAIKDGEVDYNKCILCLKCVEICP
HHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC
NDALKVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFENGHLYYSPDVCWKCME
CCCEEECCEEEEEEECCCCCCCHHHEEECCCHHHHCCCCCEEECCCEEEECHHHHHHHHH
CVKICPNDVRRIKQDFRRLYIHKGNLMPKASMGNNKLYSCESPVDDRVVGGCSLCEICIN
HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHH
NCPEEAISITTVKLEKIKDENCILCGTCSNVCPRDAIIIDRSNGEVLFTDNCIACETCAI
CCCHHHEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECCCEEECHHEE
HCPRDVIPNTTGYKKVVDRENSFIRTDMDFCIKCGLCNKVCPNNCIDYGVIDKERCEFCG
ECCHHHCCCCCCHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ACYNICPTKAIYLHRKWKVKE
HHHHCCCCCEEEEEEEEECCC
>Mature Secondary Structure
MRGGRMIITILDECRVEEKCQSCPFSQTSKCMEACPTDAIFLLNNKSFSCLTCGECARNC
CCCCEEEEEEHHHCCHHHHHHCCCCHHHHHHHHHCCCCEEEEEECCCCCEEEHHHHHHHC
PNKAIKRNEFGGYYVDRRRCNGCGICANVCPIGIIKIVEKDGKKFPMGICSMCGVCVEVC
CHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHC
PYNARVSSYELLNTKREGLAERYLKVLENLMKVKLFRAEEKPGKVVEKVERKSIKIDRDK
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEECHHH
CVGCLRCSYLCPRDTIVPDSIDACTSCNLCGENCPKDAIKDGEVDYNKCILCLKCVEICP
HHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHCC
NDALKVENFKVIKVKEDKTSQPTSYCINCGLCAEHCPSGALRFENGHLYYSPDVCWKCME
CCCEEECCEEEEEEECCCCCCCHHHEEECCCHHHHCCCCCEEECCCEEEECHHHHHHHHH
CVKICPNDVRRIKQDFRRLYIHKGNLMPKASMGNNKLYSCESPVDDRVVGGCSLCEICIN
HHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCHHHCCHHHHHHHHH
NCPEEAISITTVKLEKIKDENCILCGTCSNVCPRDAIIIDRSNGEVLFTDNCIACETCAI
CCCHHHEEEEEEEEEECCCCCEEEEECCCCCCCCCEEEEECCCCCEEEECCCEEECHHEE
HCPRDVIPNTTGYKKVVDRENSFIRTDMDFCIKCGLCNKVCPNNCIDYGVIDKERCEFCG
ECCHHHCCCCCCHHHHHHCCCCEEEECHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHH
ACYNICPTKAIYLHRKWKVKE
HHHHCCCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087