Definition Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome.
Accession NC_000909
Length 1,664,970

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The map label for this gene is 15669470

Identifier: 15669470

GI number: 15669470

Start: 1230523

End: 1231062

Strand: Reverse

Name: 15669470

Synonym: MJ1282.2

Alternate gene names: NA

Gene position: 1231062-1230523 (Counterclockwise)

Preceding gene: 15669471

Following gene: 15669469

Centisome position: 73.94

GC content: 26.48

Gene sequence:

>540_bases
ATGGCAAAGGATGTTTTTAACAACTCATTGGCAGAAAATGTATCCTTTATAAATACAAGTGGATATTACAATAACTCTGA
GAATGTAACATATATAAACATGTCAATGAATGGAAGCTTTTCTGGAATATTATATGTTAAAAGTTCATATAAAAACTATA
CTATAACAATTAATGAAAGCGGTAATTTTGTCTTTAATGATACAACTTCGCCAATTGAAGTTGAGTTGTTAAATAACTAT
TCAGATGTAATTCTTAACTATAATCTTAATGAGAGTATAAACAATTTTAGTGACACTTCTTATCTCATCCTAAATGAATC
CTGCAAAAATAGCTATTTCAATGTCATTTATGGTAATTCACCAATGCTTTATGTTTCTTTGCATGATGAAGATTTTAATC
ACAACATAACAATTTTTAATCCACAAAAAGGAATATCTTCTAAGGGATTTGTTTTGACAGATATTTTTATAACGACTCCA
AGGATGTTTTATTCATCTTTAAATAATTCTTTTGAATATCAAAGCTGGAACATTAATTAA

Upstream 100 bases:

>100_bases
ATTTGATACTTAATGAAACCATTTATAATAATTCCAATGAAAAATCGTTATATTATTATATCTTAAATGTATCAAAAGAA
GGGATTTTGCTATATTTATT

Downstream 100 bases:

>100_bases
TTTGGTGGAAGTATGGATTTGGGTTATTTATATGGGTTGATTTGCTCAATATATGGGGCAGTTGAGGATTGGAGAAAAAG
AGAGGTTACTGACTTTTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 178

Protein sequence:

>179_residues
MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNY
SDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTP
RMFYSSLNNSFEYQSWNIN

Sequences:

>Translated_179_residues
MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNY
SDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTP
RMFYSSLNNSFEYQSWNIN
>Mature_178_residues
AKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNYS
DVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPR
MFYSSLNNSFEYQSWNIN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YC8B_METJA (P81319)

Other databases:

- EMBL:   L77117
- RefSeq:   NP_248280.1
- ProteinModelPortal:   P81319
- GeneID:   1452182
- GenomeReviews:   L77117_GR
- KEGG:   mja:MJ_1282.2
- NMPDR:   fig|243232.1.peg.1317
- TIGR:   MJ1882.2
- BioCyc:   MJAN243232:MJ_1282.2-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20501; Mature: 20370

Theoretical pI: Translated: 4.15; Mature: 4.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINES
CCCHHHCCHHHCCEEEEECCCEECCCCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECC
GNFVFNDTTSPIEVELLNNYSDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNS
CCEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
PMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPRMFYSSLNNSFEYQSWNIN
CEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEECCC
>Mature Secondary Structure 
AKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINES
CCHHHCCHHHCCEEEEECCCEECCCCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECC
GNFVFNDTTSPIEVELLNNYSDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNS
CCEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC
PMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPRMFYSSLNNSFEYQSWNIN
CEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087