| Definition | Methanocaldococcus jannaschii DSM 2661 chromosome, complete genome. |
|---|---|
| Accession | NC_000909 |
| Length | 1,664,970 |
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The map label for this gene is 15669470
Identifier: 15669470
GI number: 15669470
Start: 1230523
End: 1231062
Strand: Reverse
Name: 15669470
Synonym: MJ1282.2
Alternate gene names: NA
Gene position: 1231062-1230523 (Counterclockwise)
Preceding gene: 15669471
Following gene: 15669469
Centisome position: 73.94
GC content: 26.48
Gene sequence:
>540_bases ATGGCAAAGGATGTTTTTAACAACTCATTGGCAGAAAATGTATCCTTTATAAATACAAGTGGATATTACAATAACTCTGA GAATGTAACATATATAAACATGTCAATGAATGGAAGCTTTTCTGGAATATTATATGTTAAAAGTTCATATAAAAACTATA CTATAACAATTAATGAAAGCGGTAATTTTGTCTTTAATGATACAACTTCGCCAATTGAAGTTGAGTTGTTAAATAACTAT TCAGATGTAATTCTTAACTATAATCTTAATGAGAGTATAAACAATTTTAGTGACACTTCTTATCTCATCCTAAATGAATC CTGCAAAAATAGCTATTTCAATGTCATTTATGGTAATTCACCAATGCTTTATGTTTCTTTGCATGATGAAGATTTTAATC ACAACATAACAATTTTTAATCCACAAAAAGGAATATCTTCTAAGGGATTTGTTTTGACAGATATTTTTATAACGACTCCA AGGATGTTTTATTCATCTTTAAATAATTCTTTTGAATATCAAAGCTGGAACATTAATTAA
Upstream 100 bases:
>100_bases ATTTGATACTTAATGAAACCATTTATAATAATTCCAATGAAAAATCGTTATATTATTATATCTTAAATGTATCAAAAGAA GGGATTTTGCTATATTTATT
Downstream 100 bases:
>100_bases TTTGGTGGAAGTATGGATTTGGGTTATTTATATGGGTTGATTTGCTCAATATATGGGGCAGTTGAGGATTGGAGAAAAAG AGAGGTTACTGACTTTTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNY SDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTP RMFYSSLNNSFEYQSWNIN
Sequences:
>Translated_179_residues MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNY SDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTP RMFYSSLNNSFEYQSWNIN >Mature_178_residues AKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINESGNFVFNDTTSPIEVELLNNYS DVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNSPMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPR MFYSSLNNSFEYQSWNIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): YC8B_METJA (P81319)
Other databases:
- EMBL: L77117 - RefSeq: NP_248280.1 - ProteinModelPortal: P81319 - GeneID: 1452182 - GenomeReviews: L77117_GR - KEGG: mja:MJ_1282.2 - NMPDR: fig|243232.1.peg.1317 - TIGR: MJ1882.2 - BioCyc: MJAN243232:MJ_1282.2-MONOMER
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20501; Mature: 20370
Theoretical pI: Translated: 4.15; Mature: 4.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINES CCCHHHCCHHHCCEEEEECCCEECCCCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECC GNFVFNDTTSPIEVELLNNYSDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNS CCEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC PMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPRMFYSSLNNSFEYQSWNIN CEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEECCC >Mature Secondary Structure AKDVFNNSLAENVSFINTSGYYNNSENVTYINMSMNGSFSGILYVKSSYKNYTITINES CCHHHCCHHHCCEEEEECCCEECCCCCEEEEEEEECCCEEEEEEEEECCCEEEEEEECC GNFVFNDTTSPIEVELLNNYSDVILNYNLNESINNFSDTSYLILNESCKNSYFNVIYGNS CCEEECCCCCCEEEEEECCCEEEEEEECCCCCCCCCCCCEEEEEECCCCCCEEEEEECCC PMLYVSLHDEDFNHNITIFNPQKGISSKGFVLTDIFITTPRMFYSSLNNSFEYQSWNIN CEEEEEEECCCCCCCEEEECCCCCCCCCCEEEEEEEEECHHHHHHHHCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087